Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 2.6e-164 582.0 303 100.0
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 4.9e-163 577.8 303 99.0
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 2.7e-129 465.7 303 79.2
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 7.9e-129 464.2 303 78.5
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 2.8e-126 455.7 303 77.6
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 2.8e-126 455.7 303 77.2
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 2.6e-124 449.1 300 77.3
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 7.2e-122 441.0 301 75.1
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 2.1e-121 439.5 306 75.2
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 2.7e-121 439.1 298 75.8
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 7.9e-121 437.6 301 74.1
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 5.2e-120 434.9 300 76.0
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 5.2e-120 434.9 296 75.7
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 2.8e-118 429.1 301 72.8
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 3.7e-118 428.7 300 75.0
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 1.4e-117 426.8 300 74.7
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 2.4e-117 426.0 301 72.8
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 7.0e-117 424.5 303 73.9
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 3.5e-116 422.2 298 73.5
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 5.9e-116 421.4 297 76.1
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 1.7e-115 419.9 300 72.3
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 3.8e-115 418.7 302 73.2
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 6.5e-115 417.9 300 71.3
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 1.5e-114 416.8 303 71.6
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 1.9e-114 416.4 302 71.9
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 5.5e-114 414.8 351 64.4
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 2.1e-113 412.9 322 68.9
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 2.7e-113 412.5 302 71.9
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 6.1e-113 411.4 302 72.8
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 8.0e-113 411.0 305 70.5
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 8.0e-113 411.0 302 72.2
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 8.0e-113 411.0 302 71.5
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 8.0e-113 411.0 300 70.3
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 1.4e-112 410.2 303 72.3
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 1.4e-112 410.2 304 71.7
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 2.3e-112 409.5 299 73.9
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 2.3e-112 409.5 303 69.6
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 8.8e-112 407.5 300 69.0
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 1.5e-111 406.8 300 69.0
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 4.4e-111 405.2 303 71.0
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 4.4e-111 405.2 300 73.0
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 1.7e-110 403.3 303 72.3
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 2.2e-110 402.9 322 66.1
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 2.8e-110 402.5 322 66.1
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 8.2e-110 401.0 304 71.7
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 1.4e-109 400.2 303 69.6
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 3.1e-109 399.1 302 71.5
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 3.1e-109 399.1 300 73.0
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 4.1e-109 398.7 303 70.6
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 4.1e-109 398.7 304 69.7
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 4.1e-109 398.7 280 72.5
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 7.0e-109 397.9 302 71.2
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 9.1e-109 397.5 303 68.6
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 1.2e-108 397.1 334 66.2
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 1.2e-108 397.1 302 69.5
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 1.6e-108 396.7 301 72.1
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 2.0e-108 396.4 304 72.0
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 3.5e-108 395.6 301 67.4
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 5.9e-108 394.8 303 68.6
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 2.2e-107 392.9 366 60.1
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 2.9e-107 392.5 302 70.9
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 2.9e-107 392.5 302 70.9
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 1.5e-106 390.2 299 69.9
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 1.9e-106 389.8 331 65.0
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 1.2e-105 387.1 300 69.7
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 2.7e-105 386.0 301 68.8
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 4.7e-105 385.2 299 71.9
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 6.1e-105 384.8 280 72.5
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 1.0e-104 384.0 302 71.2
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 1.0e-104 384.0 302 71.2
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 3.0e-104 382.5 302 70.9
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 2.2e-102 376.3 368 56.2
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 2.2e-102 376.3 262 72.9
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 6.3e-102 374.8 279 71.0
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 1.8e-101 373.2 328 65.9
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 2.4e-101 372.9 256 74.6
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 4.1e-101 372.1 256 74.6
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 5.4e-101 371.7 280 72.1
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 1.6e-100 370.2 302 68.2
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 4.5e-100 368.6 276 70.7
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 1.9e-98 363.2 328 63.1
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 3.2e-98 362.5 342 60.5
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 1.0e-96 357.5 256 71.9
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 4.0e-96 355.5 256 72.7
Aqoxy385s001 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 2.0e-95 353.2 303 65.3
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 3.1e-93 345.9 293 67.2
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 9.2e-93 344.4 315 63.2
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 9.2e-93 344.4 256 70.7
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 2.7e-92 342.8 369 54.5
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 1.7e-91 340.1 309 63.8
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 1.1e-90 337.4 258 69.0
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 3.3e-90 335.9 304 65.1
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 9.5e-90 334.3 261 69.3
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 3.6e-89 332.4 329 59.6
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 6.8e-88 328.2 284 63.7
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 8.9e-88 327.8 303 60.4
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 1.5e-87 327.0 206 79.1
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 9.8e-87 324.3 323 57.0
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 2.2e-86 323.2 209 76.6
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 6.4e-86 321.6 252 66.7
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 2.0e-84 316.6 207 74.4
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 2.7e-84 316.2 235 70.2
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 4.6e-84 315.5 249 69.9
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 7.8e-84 314.7 247 71.7
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.3e-83 313.9 255 65.9
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 1.5e-82 310.5 299 60.9
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 7.3e-82 308.1 325 53.8
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 2.8e-81 306.2 259 63.7
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 6.8e-80 301.6 185 81.6
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.2e-79 300.8 303 55.1
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 2.0e-79 300.1 296 56.8
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 2.4e-77 293.1 272 62.5
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 7.0e-77 291.6 245 64.9
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 8.3e-70 268.1 290 54.8
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 1.9e-69 266.9 226 65.5
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 3.2e-69 266.2 353 47.9
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 2.1e-68 263.5 200 66.0
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 1.7e-67 260.4 165 77.6
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.5e-66 257.3 249 55.4
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 5.6e-66 255.4 297 51.9
RcHm_v2.0_Chr5g0068831 Rosa chinensis HOM05D005817 ORTHO05D007140 4.1e-61 239.2 154 78.6
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 1.7e-59 233.8 202 62.4
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 1.1e-56 224.6 157 72.0
Zm00001eb174130 Zea mays HOM05D005817 ORTHO05D007140 6.9e-48 195.3 129 76.7
VMungo0766G0001 Vigna mungo HOM05D005817 ORTHO05D007140 1.5e-31 141.0 144 56.9
MCO12G229 Micromonas commoda HOM05D005817 ORTHO05D007140 1.4e-29 134.4 310 33.5
Cre02.g106550 Chlamydomonas reinhardtii HOM05D005817 ORTHO05D007140 2.7e-28 130.2 331 33.5
VMungo1148G0001 Vigna mungo HOM05D005817 ORTHO05D007140 2.1e-20 104.0 80 70.0
PRCOL_00002712 Prasinoderma coloniale HOM05D005817 ORTHO05D007140 1.9e-18 97.4 329 29.8
SEGI_07435 Sequoiadendron giganteum HOM05D005817 ORTHO05D007140 1.0e-14 85.1 96 50.0
FvH4_3g40414 Fragaria vesca HOM05D005817 ORTHO05D007140 8.8e-11 72.0 57 61.4
Thhalv10005196m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 2.6e-10 70.5 52 73.1
Lalb_Chr12g0195851 Lupinus albus HOM05D005817 ORTHO05D007140 2.4e-08 63.9 52 61.5
CARHR145100 Cardamine hirsuta HOM05D005817 ORTHO05D007140 9.1e-08 62.0 72 54.2
COL.COLO4_38165 Corchorus olitorius HOM05D011921 ORTHO05D160408 1.2e-07 61.6 181 35.4
CDE04G0373 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.7e-06 57.8 46 69.6


User provided reference genes

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