Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4808 Papaver somniferum HOM05D000366 ORTHO05D030420 2.1e-280 968.4 498 100.0
PSO478G1656 Papaver somniferum HOM05D000366 ORTHO05D030420 1.3e-248 862.8 502 90.8
PSO063G4839 Papaver somniferum HOM05D000366 ORTHO05D000437 1.4e-167 593.6 625 57.3
PSO782G5571 Papaver somniferum HOM05D000366 ORTHO05D000437 9.3e-151 537.7 570 57.2
PSO170G5984 Papaver somniferum HOM05D000366 ORTHO05D030420 2.7e-89 333.6 497 44.3
PSO455G0217 Papaver somniferum HOM05D000366 ORTHO05D030420 2.7e-73 280.4 451 43.5
GSVIVG01014219001 Vitis vinifera HOM05D000366 ORTHO05D000437 8.1e-38 162.5 462 28.8
TAR626G0976 Trochodendron aralioides HOM05D000366 ORTHO05D000437 4.0e-37 160.2 382 33.0
TAR629G0390 Trochodendron aralioides HOM05D002478 ORTHO05D000437 2.2e-35 154.5 446 31.2
Potri.001G392801 Populus trichocarpa HOM05D000366 ORTHO05D000437 1.4e-34 151.8 282 34.0
Sabra16G0257700 Salix brachista HOM05D000366 ORTHO05D000437 7.1e-34 149.4 290 34.8
Thecc.07G107600 Theobroma cacao HOM05D000366 ORTHO05D000437 6.0e-33 146.4 280 33.9
Atru.chr2.2204 Acer truncatum HOM05D000366 ORTHO05D000437 1.0e-32 145.6 282 33.0
Nn1g09076 Nelumbo nucifera HOM05D000366 ORTHO05D000437 1.1e-31 142.1 313 32.9
MBI07_g22391_MAGBIO Magnolia biondii HOM05D000366 ORTHO05D000437 4.3e-31 140.2 432 28.0
COL.COLO4_17591 Corchorus olitorius HOM05D000366 ORTHO05D000437 5.6e-31 139.8 332 33.4
Duzib213G0779 Durio zibethinus HOM05D000366 ORTHO05D000437 7.4e-31 139.4 286 34.6
Dinv14976 Davidia involucrata HOM05D000366 ORTHO05D000437 1.3e-30 138.7 334 34.1
TWI39G0418 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 1.6e-30 138.3 392 27.8
Cfa019583 Carpinus fangiana HOM05D000366 ORTHO05D000437 2.8e-30 137.5 344 32.3
Haze_09342 Corylus avellana HOM05D000366 ORTHO05D000437 6.2e-30 136.3 327 32.1
Dinv18351 Davidia involucrata HOM05D000366 ORTHO05D000437 1.8e-29 134.8 266 35.3
Aqoxy4G00413 Aquilegia oxysepala HOM05D000366 ORTHO05D000437 2.4e-29 134.4 300 30.3
Gorai.013G173100 Gossypium raimondii HOM05D000366 ORTHO05D000437 2.4e-29 134.4 301 33.2
Gorai.007G326300 Gossypium raimondii HOM05D000366 ORTHO05D000437 5.3e-29 133.3 353 28.9
Gohir.D11G305900 Gossypium hirsutum HOM05D000366 ORTHO05D000437 1.2e-28 132.1 353 28.9
Gohir.D13G153200 Gossypium hirsutum HOM05D000366 ORTHO05D000437 1.2e-28 132.1 144 43.8
Prupe.4G167700 Prunus persica HOM05D000366 ORTHO05D000437 1.2e-28 132.1 342 31.9
Lj8C150G3 Lonicera japonica HOM05D000366 ORTHO05D000437 2.6e-28 131.0 422 28.2
Gohir.A13G148700 Gossypium hirsutum HOM05D000366 ORTHO05D000437 5.8e-28 129.8 251 34.7
Gohir.A11G287200 Gossypium hirsutum HOM05D000366 ORTHO05D000437 1.7e-27 128.3 353 28.3
MD03G1241200 Malus domestica HOM05D000366 ORTHO05D000437 1.7e-27 128.3 257 33.5
arahy.Tifrunner.gnm1.ann1.JLX6YP Arachis hypogaea HOM05D000366 ORTHO05D000437 2.2e-27 127.9 488 27.3
Actinidia12564 Actinidia chinensis HOM05D000366 ORTHO05D000437 8.4e-27 125.9 344 32.3
Lj1C832G6 Lonicera japonica HOM05D000366 ORTHO05D000437 1.1e-26 125.6 384 27.9
MD11G1260600 Malus domestica HOM05D000366 ORTHO05D000437 1.1e-26 125.6 257 33.5
Ciclev10018500m.g Citrus clementina HOM05D000366 ORTHO05D000437 4.2e-26 123.6 268 32.5
Manes.15G092800 Manihot esculenta HOM05D000366 ORTHO05D000437 7.1e-26 122.9 270 31.5
Rhsim04G0024800 Rhododendron simsii HOM05D000366 ORTHO05D000437 7.1e-26 122.9 267 33.0
vmacro09499 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 7.1e-26 122.9 280 33.2
QL08p026669 Quercus lobata HOM05D000366 ORTHO05D000437 9.3e-26 122.5 326 30.7
arahy.Tifrunner.gnm1.ann1.7Z9IPQ Arachis hypogaea HOM05D000366 ORTHO05D000437 2.1e-25 121.3 488 26.6
Sed0008083 Sechium edule HOM05D000366 ORTHO05D000437 7.9e-25 119.4 247 32.4
vmacro11921 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 2.3e-24 117.9 279 32.6
RcHm_v2.0_Chr5g0031311 Rosa chinensis HOM05D000366 ORTHO05D000437 3.0e-24 117.5 334 28.7
Cc05_g11270 Coffea canephora HOM05D000366 ORTHO05D000437 5.1e-24 116.7 375 28.5
Glyma.12G228700 Glycine max HOM05D000366 ORTHO05D000437 5.1e-24 116.7 298 30.2
PGR083G2734 Punica granatum HOM05D000366 ORTHO05D000437 5.1e-24 116.7 360 30.8
Lalb_Chr20g0109351 Lupinus albus HOM05D000366 ORTHO05D000437 1.9e-23 114.8 255 32.2
CANSAT35G0453 Cannabis sativa HOM05D000366 ORTHO05D000437 2.5e-23 114.4 318 32.1
Sc16g0007490 Simmondsia chinensis HOM05D000366 ORTHO05D000437 3.3e-23 114.0 258 32.6
Hma1.2p1_0052F.1_g029970 Hydrangea macrophylla HOM05D000366 ORTHO05D000437 4.3e-23 113.6 263 30.0
Hma1.2p1_2017F.1_g311140 Hydrangea macrophylla HOM05D000366 ORTHO05D000437 4.3e-23 113.6 263 30.0
CAN.G162.14 Capsicum annuum HOM05D000366 ORTHO05D000437 9.6e-23 112.5 251 31.5
ClCG11G017540 Citrullus lanatus HOM05D000366 ORTHO05D000437 9.6e-23 112.5 285 29.5
Lalb_Chr01g0016641 Lupinus albus HOM05D000366 ORTHO05D000437 9.6e-23 112.5 278 29.9
Actinidia31603 Actinidia chinensis HOM05D000366 ORTHO05D000437 1.3e-22 112.1 335 32.5
TWI38G2315 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 1.6e-22 111.7 194 33.5
CiPaw.11G161800 Carya illinoinensis HOM05D000366 ORTHO05D000437 8.1e-22 109.4 186 32.8
Nitab4.5_0000246g0180 Nicotiana tabacum HOM05D000366 ORTHO05D000437 8.1e-22 109.4 378 26.7
Nitab4.5_0007253g0020 Nicotiana tabacum HOM05D000366 ORTHO05D000437 8.1e-22 109.4 378 26.7
CSS0001097 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D000437 1.4e-21 108.6 285 30.2
FvH4_3g18560 Fragaria vesca HOM05D000366 ORTHO05D000437 1.4e-21 108.6 369 29.8
MELO3C025632.2 Cucumis melo HOM05D000366 ORTHO05D000437 1.8e-21 108.2 135 38.5
CsaV3_4G033210 Cucumis sativus L. HOM05D000366 ORTHO05D000437 2.4e-21 107.8 151 34.4
FAN16G3372 Fragaria x ananassa HOM05D000366 ORTHO05D000437 3.1e-21 107.5 420 28.8
Glyma.13G271100 Glycine max HOM05D000366 ORTHO05D000437 5.3e-21 106.7 304 30.3
Cpa.g.sc97.95 Carica papaya HOM05D000366 ORTHO05D000437 2.0e-20 104.8 341 28.7
FAN11G1632 Fragaria x ananassa HOM05D000366 ORTHO05D000437 2.0e-20 104.8 369 29.3
Lj3g0018614 Lotus japonicus HOM05D000366 ORTHO05D000437 2.0e-20 104.8 253 30.4
Sp3g13180 Schrenkiella parvula HOM05D000366 ORTHO05D000437 3.4e-20 104.0 446 27.4
FAN21G1728 Fragaria x ananassa HOM05D000366 ORTHO05D000437 4.5e-20 103.6 363 27.8
VMungo1080G1639 Vigna mungo HOM05D000366 ORTHO05D000437 4.5e-20 103.6 153 35.3
EL10Ac4g08310 Beta vulgaris HOM05D000366 ORTHO05D000437 5.8e-20 103.2 266 30.5
Thhalv10019928m.g Eutrema salsugineum HOM05D000366 ORTHO05D000437 2.2e-19 101.3 217 32.7
Solyc07g062600.4 Solanum lycopersicum HOM05D000366 ORTHO05D000437 2.2e-19 101.3 249 30.5
Sopen07g030830 Solanum pennellii HOM05D000366 ORTHO05D000437 2.2e-19 101.3 249 30.5
BcaB06g25336 Brassica carinata HOM05D000366 ORTHO05D000437 3.8e-19 100.5 449 26.1
Psat5g238000 Pisum sativum HOM05D000366 ORTHO05D000437 3.8e-19 100.5 191 34.6
Aa31LG8G2180 Aethionema arabicum HOM05D000366 ORTHO05D000437 1.4e-18 98.6 440 26.8
Oeu051127.1 Olea europaea HOM05D000366 ORTHO05D000437 1.4e-18 98.6 221 29.4
Phvul.005G067300 Phaseolus vulgaris HOM05D000366 ORTHO05D000437 2.5e-18 97.8 372 27.7
AL3G27310 Arabidopsis lyrata HOM05D000366 ORTHO05D000437 3.2e-18 97.4 419 26.7
ECA234G4406 Erigeron canadensis HOM05D000366 ORTHO05D000437 4.2e-18 97.1 156 35.3
A05p34470 Brassica napus HOM05D000366 ORTHO05D000437 7.1e-18 96.3 433 25.9
BraA05t22266Z Brassica rapa HOM05D000366 ORTHO05D000437 7.1e-18 96.3 441 25.6
AUR62019535 Chenopodium quinoa HOM05D000366 ORTHO05D000437 1.2e-17 95.5 194 35.6
HanXRQChr10g0304861 Helianthus annuus HOM05D000366 ORTHO05D000437 1.2e-17 95.5 386 26.9
AT3G14980 Arabidopsis thaliana HOM05D000366 ORTHO05D000437 2.7e-17 94.4 456 25.7
MSTRG.12872 Avicennia marina HOM05D000366 ORTHO05D000437 2.7e-17 94.4 170 32.4
Zm00001eb082620 Zea mays HOM05D000366 ORTHO05D000437 2.7e-17 94.4 391 24.6
BolC5t33907H Brassica oleracea HOM05D000366 ORTHO05D000437 3.5e-17 94.0 491 26.3
TPR.G30903 Trifolium pratense HOM05D000366 ORTHO05D000437 3.5e-17 94.0 213 30.5
CARHR089940 Cardamine hirsuta HOM05D000366 ORTHO05D000437 4.6e-17 93.6 320 31.2
AUR62036102 Chenopodium quinoa HOM05D000366 ORTHO05D000437 1.0e-16 92.4 215 33.0
Carub.0003s1464 Capsella rubella HOM05D000366 ORTHO05D000437 1.3e-16 92.0 494 24.1
C05p52210 Brassica napus HOM05D000366 ORTHO05D000437 3.0e-16 90.9 491 25.7
Migut.H01986 Erythranthe guttata HOM05D000366 ORTHO05D000437 3.9e-16 90.5 237 29.1
Lsat_1_v5_gn_5_127360 Lactuca sativa HOM05D000366 ORTHO05D000437 5.1e-16 90.1 283 25.4
THA.LOC104810441 Tarenaya hassleriana HOM05D000366 ORTHO05D000437 6.7e-16 89.7 158 35.4
Actinidia35218 Actinidia chinensis HOM05D000366 ORTHO05D000437 8.7e-16 89.4 312 27.2
Ca_03999_v3 Cicer arietinum L. HOM05D000366 ORTHO05D000437 1.1e-15 89.0 252 26.6
unitig_749.g13537 Utricularia gibba HOM05D000366 ORTHO05D000437 1.1e-15 89.0 193 29.5
MSTRG.12870 Avicennia marina HOM05D000366 ORTHO05D000437 1.5e-15 88.6 170 31.2
Peaxi162Scf00069g02134 Petunia axillaris HOM05D000366 ORTHO05D000437 1.5e-15 88.6 247 30.0
SalBow7G4451 Salvia bowleyana HOM05D000366 ORTHO05D000437 1.5e-15 88.6 175 32.6
Medtr2g078040 Medicago truncatula HOM05D000366 ORTHO05D000437 2.5e-15 87.8 283 26.1
Os04g0433900 Oryza sativa ssp. japonica HOM05D000366 ORTHO05D000437 7.4e-15 86.3 333 24.3
Ah.06g185100 Amaranthus hybridus HOM05D000366 ORTHO05D000437 1.6e-14 85.1 305 26.9
DCAR_021018 Daucus carota HOM05D000366 ORTHO05D000437 1.6e-14 85.1 285 26.7
Rhsim06G0206400 Rhododendron simsii HOM05D000366 ORTHO05D000437 3.7e-14 84.0 201 32.3
ECA236G5053 Erigeron canadensis HOM05D000366 ORTHO05D000437 6.3e-14 83.2 269 28.6
HPP92_001078 Vanilla planifolia HOM05D000366 ORTHO05D000437 2.6e-12 77.8 258 25.6
Zm00001eb434470 Zea mays HOM05D000366 ORTHO05D000437 4.5e-12 77.0 182 25.8
Lsat_1_v5_gn_7_103320 Lactuca sativa HOM05D000366 ORTHO05D000437 2.1e-09 68.2 234 27.4
CDE09G0928 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 1.9e-07 61.6 201 25.9
ATR0787G219 Amborella trichopoda HOM05D000366 ORTHO05D000437 2.5e-07 61.2 218 27.5
Eucgr.F01223 Eucalyptus grandis HOM05D000366 ORTHO05D000437 5.7e-07 60.1 259 22.0
BcaB06g29525 Brassica carinata HOM05D000366 ORTHO05D000437 2.2e-06 58.2 188 28.7


User provided reference genes

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