Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2979 Papaver somniferum HOM05D033783 ORTHO05D004116 2.5e-255 885.2 517 100.0
PSO170G3936 Papaver somniferum HOM05D033783 ORTHO05D004116 5.2e-237 824.3 521 95.0
PSO170G3822 Papaver somniferum HOM05D033783 ORTHO05D003633 2.1e-182 642.9 357 93.6
PSO017G2158 Papaver somniferum HOM05D003141 ORTHO05D003633 3.5e-60 236.9 439 41.0
PSO170G6315 Papaver somniferum HOM05D003141 ORTHO05D003633 2.0e-55 221.1 427 40.3
PSO017G0756 Papaver somniferum HOM05D003719 ORTHO05D004116 1.5e-39 168.3 442 34.4
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 8.2e-25 119.4 77 71.4
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 8.2e-25 119.4 77 71.4
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 3.8e-22 110.5 134 46.3
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 1.4e-21 108.6 70 67.1
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 6.1e-20 103.2 82 58.5
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 6.1e-20 103.2 75 64.0
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 1.8e-19 101.7 69 65.2
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 1.8e-19 101.7 74 63.5
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 2.3e-19 101.3 79 59.5
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 3.0e-19 100.9 79 59.5
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 3.9e-19 100.5 106 53.8
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 3.9e-19 100.5 105 52.4
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 5.1e-19 100.1 133 43.6
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 5.1e-19 100.1 74 62.2
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 5.1e-19 100.1 81 59.3
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 5.1e-19 100.1 156 41.0
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 8.8e-19 99.4 70 65.7
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 8.8e-19 99.4 74 62.2
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 8.8e-19 99.4 53 77.4
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 8.8e-19 99.4 80 57.5
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 8.8e-19 99.4 86 54.7
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 1.5e-18 98.6 71 59.2
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 1.5e-18 98.6 88 54.5
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 2.0e-18 98.2 69 65.2
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 2.0e-18 98.2 67 65.7
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 2.5e-18 97.8 71 59.2
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 2.5e-18 97.8 71 60.6
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 4.3e-18 97.1 77 63.6
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 4.3e-18 97.1 70 60.0
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 4.3e-18 97.1 77 63.6
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 4.3e-18 97.1 77 63.6
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 4.3e-18 97.1 80 57.5
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 4.3e-18 97.1 158 37.3
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 5.7e-18 96.7 81 55.6
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 7.4e-18 96.3 78 59.0
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 9.7e-18 95.9 77 57.1
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 9.7e-18 95.9 67 64.2
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 1.3e-17 95.5 77 57.1
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 1.7e-17 95.1 151 35.8
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 1.7e-17 95.1 149 38.3
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.7e-17 95.1 168 34.5
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 1.7e-17 95.1 161 35.4
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 2.2e-17 94.7 147 38.1
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 2.2e-17 94.7 183 35.5
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 2.2e-17 94.7 69 63.8
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 2.8e-17 94.4 160 35.0
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 3.7e-17 94.0 65 64.6
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 3.7e-17 94.0 65 64.6
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 3.7e-17 94.0 65 64.6
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 3.7e-17 94.0 160 34.4
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 3.7e-17 94.0 79 57.0
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 3.7e-17 94.0 67 61.2
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 3.7e-17 94.0 67 61.2
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 3.7e-17 94.0 65 63.1
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 4.8e-17 93.6 81 56.8
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 4.8e-17 93.6 67 61.2
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 6.3e-17 93.2 62 66.1
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 6.3e-17 93.2 63 63.5
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 6.3e-17 93.2 218 29.8
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 6.3e-17 93.2 69 59.4
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 8.2e-17 92.8 81 53.1
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 1.1e-16 92.4 81 53.1
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 1.1e-16 92.4 145 40.0
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 1.4e-16 92.0 66 60.6
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 1.4e-16 92.0 158 34.8
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 1.8e-16 91.7 77 61.0
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 1.8e-16 91.7 65 60.0
PSO675G5773 Papaver somniferum HOM05D003719 ORTHO05D004116 1.8e-16 91.7 156 41.7
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 2.4e-16 91.3 161 37.9
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 2.4e-16 91.3 64 57.8
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 2.4e-16 91.3 66 56.1
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 2.4e-16 91.3 64 60.9
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 2.4e-16 91.3 66 63.6
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 2.4e-16 91.3 66 63.6
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 2.4e-16 91.3 66 63.6
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 3.1e-16 90.9 52 71.2
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 3.1e-16 90.9 131 42.7
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 3.1e-16 90.9 80 56.2
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 3.1e-16 90.9 67 61.2
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 3.1e-16 90.9 68 66.2
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 3.1e-16 90.9 66 68.2
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 3.1e-16 90.9 65 64.6
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 3.1e-16 90.9 64 60.9
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 3.1e-16 90.9 65 66.2
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 4.1e-16 90.5 69 63.8
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 4.1e-16 90.5 65 60.0
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 5.3e-16 90.1 66 62.1
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 5.3e-16 90.1 69 56.5
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 5.3e-16 90.1 53 71.7
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 6.9e-16 89.7 75 56.0
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 6.9e-16 89.7 68 61.8
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 6.9e-16 89.7 76 63.2
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 6.9e-16 89.7 64 65.6
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 9.1e-16 89.4 79 57.0
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 9.1e-16 89.4 76 57.9
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 9.1e-16 89.4 76 61.8
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 1.2e-15 89.0 79 53.2
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 1.5e-15 88.6 66 59.1
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 1.5e-15 88.6 76 59.2
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 1.5e-15 88.6 92 51.1
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 2.0e-15 88.2 142 38.0
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 2.0e-15 88.2 68 61.8
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 2.6e-15 87.8 79 53.2
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 2.6e-15 87.8 79 53.2
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 2.6e-15 87.8 79 53.2
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 2.6e-15 87.8 79 53.2
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 2.6e-15 87.8 79 53.2
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 3.4e-15 87.4 65 60.0
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 4.5e-15 87.0 100 46.0
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 4.5e-15 87.0 68 58.8
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 4.5e-15 87.0 68 58.8
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 5.9e-15 86.7 58 62.1
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 7.7e-15 86.3 65 58.5
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 1.0e-14 85.9 56 62.5
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 1.3e-14 85.5 72 55.6
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 1.7e-14 85.1 65 60.0
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 2.9e-14 84.3 63 58.7
PSO349G0045 Papaver somniferum HOM05D003719 ORTHO05D004116 2.9e-14 84.3 87 52.9
SEGI_28532 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 2.9e-14 84.3 60 53.3
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 2.9e-14 84.3 74 56.8
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 3.8e-14 84.0 60 61.7
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 3.8e-14 84.0 60 61.7
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 3.8e-14 84.0 60 61.7
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 3.8e-14 84.0 60 61.7
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 3.8e-14 84.0 80 50.0
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 6.5e-14 83.2 69 59.4
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 6.5e-14 83.2 69 59.4
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 6.5e-14 83.2 69 59.4
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 6.5e-14 83.2 69 59.4
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 6.5e-14 83.2 69 59.4
Lalb_Chr13g0290921 Lupinus albus HOM05D003719 ORTHO05D004116 8.5e-14 82.8 63 60.3
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 1.1e-13 82.4 62 53.2
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 1.4e-13 82.0 77 48.1
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 1.4e-13 82.0 75 49.3
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 1.9e-13 81.6 79 49.4
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 1.9e-13 81.6 79 49.4
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 1.9e-13 81.6 65 58.5
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 1.9e-13 81.6 68 55.9
HanXRQChr04g0117671 Helianthus annuus HOM05D003719 ORTHO05D004116 2.5e-13 81.3 54 61.1
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 3.2e-13 80.9 78 50.0
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 3.2e-13 80.9 89 48.3
PSO017G2223 Papaver somniferum HOM05D003719 ORTHO05D004116 4.2e-13 80.5 334 26.9
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 7.2e-13 79.7 201 32.3
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 2.1e-12 78.2 64 51.6
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 2.1e-12 78.2 65 58.5
Mapoly0010s0167 Marchantia polymorpha HOM05D003719 ORTHO05D004116 2.7e-12 77.8 142 33.1
Mapoly0024s0010 Marchantia polymorpha HOM05D003719 ORTHO05D004116 2.7e-12 77.8 142 31.7
SEGI_39270 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 2.7e-12 77.8 63 57.1
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 1.0e-11 75.9 82 42.7
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 3.0e-11 74.3 61 54.1
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 3.0e-11 74.3 81 45.7
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 3.9e-11 73.9 69 53.6
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 5.1e-11 73.6 195 31.8
arahy.Tifrunner.gnm1.ann1.RGD672 Arachis hypogaea HOM05D022377 ORTHO05D004116 1.3e-09 68.9 62 46.8
TAR636G0976 Trochodendron aralioides HOM05D003141 ORTHO05D003633 1.7e-09 68.6 349 26.9
TAR629G2689 Trochodendron aralioides HOM05D003141 ORTHO05D003633 2.8e-09 67.8 233 31.8
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 4.8e-09 67.0 70 51.4
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 6.3e-09 66.6 67 47.8
PSO732G0588 Papaver somniferum HOM05D003719 ORTHO05D004116 8.2e-09 66.2 55 54.5
TAR629G2174 Trochodendron aralioides HOM05D003141 ORTHO05D003633 8.2e-09 66.2 233 29.2
TAR375G1127 Trochodendron aralioides HOM05D003141 ORTHO05D003633 1.1e-08 65.9 280 28.9
Aqoxy7G02797 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 1.4e-08 65.5 97 34.0
arahy.Tifrunner.gnm1.ann1.FLAY3S Arachis hypogaea HOM05D003719 ORTHO05D004116 1.4e-08 65.5 73 41.1
Hma1.2p1_0462F.1_g158020 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 1.8e-08 65.1 55 56.4
arahy.Tifrunner.gnm1.ann1.SX0HJ3 Arachis hypogaea HOM05D022377 ORTHO05D004116 2.4e-08 64.7 62 45.2
arahy.Tifrunner.gnm1.ann1.ACR8J8 Arachis hypogaea HOM05D022377 ORTHO05D004116 3.1e-08 64.3 55 47.3
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 3.1e-08 64.3 205 29.3
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.2e-07 62.4 90 41.1
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 1.5e-07 62.0 60 51.7
AUR62038028 Chenopodium quinoa HOM05D003719 ORTHO05D004116 2.0e-07 61.6 49 57.1
AUR62014507 Chenopodium quinoa HOM05D003719 ORTHO05D004116 3.5e-07 60.8 49 59.2
Nn1g00964 Nelumbo nucifera HOM05D003141 ORTHO05D003633 4.5e-07 60.5 231 32.0
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 4.5e-07 60.5 98 35.7
TAR374G0926 Trochodendron aralioides HOM05D003141 ORTHO05D003633 5.9e-07 60.1 238 29.4
vmacro13601 Vaccinium macrocarpon HOM05D003719 ORTHO05D004116 7.7e-07 59.7 63 47.6


User provided reference genes

Program Settings