Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 2.0e-197 692.2 345 100.0
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 2.0e-160 569.3 319 91.2
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 3.6e-154 548.5 328 83.8
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 2.1e-149 532.7 324 80.9
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 4.3e-147 525.0 305 83.3
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 7.4e-147 524.2 309 83.5
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 1.3e-146 523.5 318 82.1
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 1.3e-146 523.5 343 77.3
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 2.8e-146 522.3 323 80.8
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 8.1e-146 520.8 324 79.6
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 1.1e-145 520.4 308 82.8
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 1.1e-145 520.4 308 82.8
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 1.1e-145 520.4 325 79.4
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 1.1e-145 520.4 325 79.4
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 1.4e-145 520.0 302 83.8
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 2.4e-145 519.2 324 79.9
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 2.4e-145 519.2 336 78.0
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 3.1e-145 518.8 336 77.1
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 4.0e-145 518.5 345 75.1
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 6.9e-145 517.7 312 80.8
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 6.9e-145 517.7 320 79.7
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 6.9e-145 517.7 324 78.7
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 9.0e-145 517.3 305 82.0
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 1.2e-144 516.9 317 80.4
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 1.2e-144 516.9 310 81.3
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 2.6e-144 515.8 310 82.3
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 3.4e-144 515.4 314 81.2
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 4.5e-144 515.0 308 81.2
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 5.8e-144 514.6 310 81.6
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 5.8e-144 514.6 310 81.3
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 5.8e-144 514.6 314 79.6
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 7.6e-144 514.2 308 80.8
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 7.6e-144 514.2 328 77.4
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 7.6e-144 514.2 313 81.2
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 1.3e-143 513.5 313 80.8
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 1.7e-143 513.1 313 80.5
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 1.7e-143 513.1 314 79.6
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 2.2e-143 512.7 316 78.8
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 2.9e-143 512.3 317 79.2
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 2.9e-143 512.3 312 79.8
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 4.9e-143 511.5 323 78.0
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 8.4e-143 510.8 323 77.7
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 8.4e-143 510.8 310 81.3
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 1.1e-142 510.4 310 80.0
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 1.1e-142 510.4 324 78.1
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 1.9e-142 509.6 337 75.7
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 2.4e-142 509.2 308 81.2
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 2.4e-142 509.2 308 80.5
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 2.4e-142 509.2 336 75.6
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 2.4e-142 509.2 310 81.3
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 3.2e-142 508.8 313 80.5
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 7.1e-142 507.7 331 75.8
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 9.3e-142 507.3 317 78.5
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 1.6e-141 506.5 335 76.4
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 6.0e-141 504.6 310 80.0
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 1.0e-140 503.8 307 79.2
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 3.0e-140 502.3 317 78.2
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 8.7e-140 500.7 332 75.3
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 1.1e-139 500.4 306 81.0
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 1.1e-139 500.4 324 75.9
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 1.5e-139 500.0 310 78.1
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 2.5e-139 499.2 314 78.7
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 2.5e-139 499.2 308 79.2
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 4.5e-136 488.4 318 76.4
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.7e-135 486.5 408 64.0
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 1.4e-134 483.4 300 79.3
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 4.2e-134 481.9 346 72.8
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 2.1e-133 479.6 317 76.3
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 7.9e-133 477.6 315 77.1
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 3.9e-132 475.3 317 75.7
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 1.3e-130 470.3 352 67.9
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 4.1e-129 465.3 308 76.0
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.5e-128 463.4 314 72.9
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 4.5e-128 461.8 315 73.7
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 2.9e-127 459.1 319 73.0
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 2.9e-127 459.1 313 73.2
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 2.7e-125 452.6 324 71.9
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 2.7e-125 452.6 332 70.8
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 7.9e-125 451.1 340 68.5
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 1.3e-124 450.3 280 80.7
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 5.3e-121 438.3 315 72.1
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 1.2e-120 437.2 314 71.3
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 2.6e-120 436.0 320 69.1
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 2.6e-120 436.0 309 69.6
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 7.2e-118 427.9 287 75.6
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 7.2e-118 427.9 497 50.5
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 2.7e-117 426.0 418 56.5
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 3.6e-117 425.6 309 73.1
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 3.3e-115 419.1 307 68.1
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 1.4e-113 413.7 306 67.3
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 1.8e-113 413.3 303 68.3
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 4.5e-112 408.7 268 76.9
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 1.4e-110 403.7 279 74.9
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 8.8e-108 394.4 308 66.2
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 8.8e-108 394.4 230 84.3
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 1.5e-107 393.7 237 81.0
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 2.6e-107 392.9 252 75.8
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 3.7e-106 389.0 294 66.3
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 5.3e-105 385.2 244 78.7
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 7.7e-104 381.3 313 65.2
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 4.0e-100 369.0 260 68.8
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 8.2e-98 361.3 255 71.0
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.9e-95 352.8 322 59.3
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 4.7e-93 345.5 219 77.6
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 8.0e-93 344.7 212 78.8
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 7.5e-91 338.2 226 72.1
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.4e-89 334.0 310 58.4
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 6.5e-87 325.1 300 57.0
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 7.8e-72 275.0 302 49.7
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 5.6e-70 268.9 182 73.1
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 1.2e-67 261.2 176 73.3
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 2.0e-67 260.4 210 69.0
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 5.8e-67 258.8 175 71.4
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 6.6e-63 245.4 157 77.7
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 4.4e-59 232.6 158 72.8
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.4e-57 226.9 488 33.6
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 3.2e-57 226.5 120 90.0
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 4.6e-56 222.6 118 89.8
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 1.7e-50 204.1 144 68.8
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 8.1e-45 185.3 113 79.6
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 2.9e-42 176.8 227 47.1
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.4e-41 174.5 267 36.7
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.7e-40 170.2 99 79.8
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 4.6e-32 142.9 287 33.8
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 1.6e-29 134.4 66 95.5
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 3.7e-29 133.3 303 29.4
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 3.2e-25 120.2 61 95.1
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 7.1e-25 119.0 73 82.2
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 2.3e-23 114.0 59 93.2
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 1.1e-22 111.7 63 84.1
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 3.7e-21 106.7 70 71.4
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 3.1e-20 103.6 55 90.9
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 1.9e-17 94.4 60 80.0
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 1.1e-12 78.6 43 86.0
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 5.9e-11 72.8 82 46.3
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 6.5e-10 69.3 33 90.9
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 4.2e-09 66.6 55 63.6
AL1G36500 Arabidopsis lyrata HOM05D005536 ORTHO05D006999 3.3e-06 57.0 110 31.8
AT1G22940 Arabidopsis thaliana HOM05D005536 ORTHO05D006999 7.4e-06 55.8 110 31.8


User provided reference genes

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