Gene: AT5G37850
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G37850
- Transcript Identifier AT5G37850.2
- Gene Type Coding gene
- Location Chr5 : 15065621-15068783 : positive
Gene Family Information
- ID HOM05D005540
- #Genes/#Species 139/98
- Phylogenetic origin
- ID ORTHO05D006932
- #Genes/#Species 136/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G37850.2
- symbol SOS4
- Alias ATSOS4,SALT OVERLY SENSITIVE 4
- full_name SALT OVERLY SENSITIVE 4
- uniprot Q8W1X2
Descriptions
- Description pfkB-like carbohydrate kinase family protein
- Computational description SALT OVERLY SENSITIVE 4 (SOS4); FUNCTIONS IN: pyridoxal kinase activity, kinase activity; INVOLVED IN: pyridoxine biosynthetic process, hyperosmotic salinity response, trichoblast differentiation, pyridoxal 5'-phosphate salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase (InterPro:IPR004625), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749); BEST Arabidopsis thaliana protein match is: thiamin biosynthesis protein, putative (TAIR:AT1G22940.1); Has 6182 Blast hits to 6179 proteins in 1931 species: Archae - 81; Bacteria - 5137; Metazoa - 195; Fungi - 190; Plants - 75; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink).
- Computational description SALT OVERLY SENSITIVE 4 (SOS4); FUNCTIONS IN: pyridoxal kinase activity, kinase activity; INVOLVED IN: pyridoxine biosynthetic process, hyperosmotic salinity response, trichoblast differentiation, pyridoxal 5'-phosphate salvage; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase (InterPro:IPR004625), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749); BEST Arabidopsis thaliana protein match is: thiamin biosynthesis protein, putative (TAIR:AT1G22940.1); Has 6118 Blast hits to 6115 proteins in 1907 species: Archae - 81; Bacteria - 5074; Metazoa - 195; Fungi - 190; Plants - 75; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009443 | IDA IBA IEA | Gene Ontology | pyridoxal 5'-phosphate salvage | 1 2 |
| GO:0009443 | IEA | InterPro | pyridoxal 5'-phosphate salvage | |
| GO:0016310 | IEA | GOA Database | phosphorylation | |
| GO:0010054 | IMP | Gene Ontology | trichoblast differentiation | 3 |
| GO:0042538 | IMP | Gene Ontology | hyperosmotic salinity response | 4 |
| GO:0008615 | TAS | Gene Ontology | pyridoxine biosynthetic process | 4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008478 | IDA, IGI IBA IEA | Gene Ontology | pyridoxal kinase activity | 1 2 4 |
| GO:0008478 | IEA | InterPro | pyridoxal kinase activity | |
| GO:0016301 | IEA | GOA Database | kinase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | IBA | Gene Ontology | cytosol | 2 |
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0009536 | HDA | Gene Ontology | plastid | 5 |
| GO:0009507 | HDA ISM | Gene Ontology | chloroplast | 6 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |