Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2223 Papaver somniferum HOM05D003719 ORTHO05D004116 2.5e-248 861.7 451 100.0
PSO349G0045 Papaver somniferum HOM05D003719 ORTHO05D004116 2.5e-139 499.6 466 64.6
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 5.4e-81 305.8 233 71.7
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 2.7e-80 303.5 233 71.2
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 5.9e-80 302.4 233 70.8
PSO675G5773 Papaver somniferum HOM05D003719 ORTHO05D004116 6.4e-34 149.4 205 46.3
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 1.8e-31 141.4 297 39.7
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 6.0e-24 116.3 342 32.7
PSO732G0588 Papaver somniferum HOM05D003719 ORTHO05D004116 9.6e-22 109.0 209 37.8
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 2.4e-20 104.4 239 36.4
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 6.9e-20 102.8 243 35.0
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 6.9e-20 102.8 245 33.9
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 2.0e-19 101.3 208 35.6
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 4.5e-19 100.1 235 34.5
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 5.8e-19 99.8 245 33.9
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 5.8e-19 99.8 232 35.3
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 7.6e-19 99.4 242 34.7
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 1.7e-18 98.2 339 31.6
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 1.7e-18 98.2 219 34.7
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 2.2e-18 97.8 238 36.6
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 3.8e-18 97.1 267 32.6
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 5.0e-18 96.7 186 38.2
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 6.5e-18 96.3 250 32.0
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 6.5e-18 96.3 223 36.3
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 1.1e-17 95.5 299 30.1
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 1.9e-17 94.7 303 29.7
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.9e-17 94.7 268 32.1
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 5.5e-17 93.2 233 32.6
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 5.5e-17 93.2 214 35.0
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 5.5e-17 93.2 65 64.6
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 9.3e-17 92.4 243 32.1
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 1.2e-16 92.0 313 28.1
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.2e-16 92.0 242 31.4
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 1.6e-16 91.7 282 30.9
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 2.1e-16 91.3 109 47.7
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 2.7e-16 90.9 327 32.4
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 2.7e-16 90.9 221 34.8
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 4.6e-16 90.1 319 30.4
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 6.1e-16 89.7 311 29.3
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 6.1e-16 89.7 245 33.9
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 1.0e-15 89.0 297 30.6
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 1.0e-15 89.0 71 62.0
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 1.0e-15 89.0 71 62.0
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 1.3e-15 88.6 208 34.6
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 1.8e-15 88.2 235 33.2
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 1.8e-15 88.2 302 31.1
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 1.8e-15 88.2 143 39.9
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 3.0e-15 87.4 239 33.5
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 3.0e-15 87.4 257 29.6
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 3.0e-15 87.4 242 31.0
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 3.9e-15 87.0 239 31.8
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 3.9e-15 87.0 301 28.6
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 5.1e-15 86.7 319 27.6
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 6.7e-15 86.3 223 31.4
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 6.7e-15 86.3 231 31.2
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 6.7e-15 86.3 332 29.8
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 6.7e-15 86.3 310 30.6
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 6.7e-15 86.3 220 33.6
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 6.7e-15 86.3 232 32.3
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 8.7e-15 85.9 226 35.4
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 8.7e-15 85.9 158 38.0
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 1.1e-14 85.5 251 31.1
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 1.5e-14 85.1 331 29.0
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 1.5e-14 85.1 232 34.1
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 1.9e-14 84.7 319 30.7
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 1.9e-14 84.7 69 58.0
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 1.9e-14 84.7 349 27.8
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 2.5e-14 84.3 238 33.2
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 3.3e-14 84.0 70 61.4
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 3.3e-14 84.0 304 31.2
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 3.3e-14 84.0 189 38.1
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 4.3e-14 83.6 316 28.2
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 4.3e-14 83.6 298 31.9
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 5.7e-14 83.2 264 31.1
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 5.7e-14 83.2 75 52.0
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 5.7e-14 83.2 75 52.0
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 5.7e-14 83.2 339 28.9
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 7.4e-14 82.8 312 31.4
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 7.4e-14 82.8 71 57.7
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 7.4e-14 82.8 340 28.2
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 9.7e-14 82.4 302 32.1
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 1.3e-13 82.0 82 53.7
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 1.6e-13 81.6 222 27.5
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 1.6e-13 81.6 217 32.3
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 1.6e-13 81.6 300 29.3
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 1.6e-13 81.6 270 31.9
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 2.2e-13 81.3 337 29.4
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 2.2e-13 81.3 260 34.6
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 2.2e-13 81.3 339 28.6
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 2.2e-13 81.3 296 30.7
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 2.2e-13 81.3 321 29.3
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 2.8e-13 80.9 304 28.6
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 2.8e-13 80.9 297 30.0
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 3.7e-13 80.5 78 55.1
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 3.7e-13 80.5 74 55.4
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 3.7e-13 80.5 266 32.7
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 4.8e-13 80.1 299 30.8
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 4.8e-13 80.1 296 29.1
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 6.3e-13 79.7 255 32.5
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 8.2e-13 79.3 259 34.4
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 1.1e-12 79.0 301 30.9
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 1.1e-12 79.0 70 57.1
PSO170G3936 Papaver somniferum HOM05D033783 ORTHO05D004116 1.1e-12 79.0 276 31.2
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 1.4e-12 78.6 302 30.8
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 1.4e-12 78.6 70 57.1
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 1.4e-12 78.6 190 35.3
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 1.4e-12 78.6 251 31.9
PSO017G0756 Papaver somniferum HOM05D003719 ORTHO05D004116 1.8e-12 78.2 71 57.7
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 1.8e-12 78.2 58 60.3
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 2.4e-12 77.8 230 32.6
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 2.4e-12 77.8 230 32.6
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 5.3e-12 76.6 310 28.1
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 5.3e-12 76.6 295 29.8
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 6.9e-12 76.3 217 32.7
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 6.9e-12 76.3 400 29.2
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 1.2e-11 75.5 338 28.4
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 1.2e-11 75.5 274 29.9
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 1.2e-11 75.5 274 29.9
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 1.2e-11 75.5 274 29.9
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 1.5e-11 75.1 65 52.3
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 1.5e-11 75.1 75 52.0
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 1.5e-11 75.1 277 32.1
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 2.0e-11 74.7 66 53.0
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 2.0e-11 74.7 66 53.0
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 2.0e-11 74.7 352 27.8
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 2.0e-11 74.7 347 28.8
SEGI_28532 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 2.6e-11 74.3 146 32.2
HanXRQChr04g0117671 Helianthus annuus HOM05D003719 ORTHO05D004116 3.4e-11 73.9 62 53.2
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 3.4e-11 73.9 232 29.7
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 5.9e-11 73.2 226 31.9
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 7.7e-11 72.8 144 36.1
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 7.7e-11 72.8 70 52.9
Lalb_Chr13g0290921 Lupinus albus HOM05D003719 ORTHO05D004116 7.7e-11 72.8 72 54.2
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 1.0e-10 72.4 82 51.2
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.3e-10 72.0 304 29.3
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 1.7e-10 71.6 319 26.6
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 6.5e-10 69.7 266 28.9
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 8.5e-10 69.3 283 30.7
Mapoly0024s0010 Marchantia polymorpha HOM05D003719 ORTHO05D004116 8.5e-10 69.3 120 35.0
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 1.1e-09 68.9 54 51.9
PSO017G2979 Papaver somniferum HOM05D033783 ORTHO05D004116 1.1e-09 68.9 334 26.9
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 1.4e-09 68.6 144 35.4
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 1.4e-09 68.6 144 35.4
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.4e-09 68.6 349 27.8
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 1.4e-09 68.6 84 41.7
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.4e-09 68.6 260 31.2
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 1.4e-09 68.6 255 28.2
Mapoly0010s0167 Marchantia polymorpha HOM05D003719 ORTHO05D004116 2.5e-09 67.8 120 35.0
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 3.2e-09 67.4 209 29.7
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 5.5e-09 66.6 484 27.3
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 1.2e-08 65.5 74 45.9
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 3.6e-08 63.9 86 44.2
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 4.6e-08 63.5 243 30.0
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 6.1e-08 63.2 243 31.3
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 7.9e-08 62.8 93 35.5
SEGI_39270 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 7.9e-08 62.8 63 54.0
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 1.4e-07 62.0 256 30.1
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 1.8e-07 61.6 65 41.5
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 3.9e-07 60.5 86 36.0
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 2.5e-06 57.8 297 27.3
arahy.Tifrunner.gnm1.ann1.FLAY3S Arachis hypogaea HOM05D003719 ORTHO05D004116 4.3e-06 57.0 70 37.1
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 7.4e-06 56.2 109 37.6
arahy.Tifrunner.gnm1.ann1.RGD672 Arachis hypogaea HOM05D022377 ORTHO05D004116 9.7e-06 55.8 62 37.1


User provided reference genes

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