Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 0.0e+00 1156.4 588 100.0
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 2.7e-306 1054.7 588 92.9
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 1.1e-246 856.7 588 73.3
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 3.8e-244 848.2 601 70.7
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 1.9e-240 835.9 601 69.9
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 3.7e-239 831.6 608 68.9
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 4.8e-239 831.2 599 70.5
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 1.7e-236 822.8 605 68.8
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 5.5e-235 817.8 599 68.4
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 1.2e-234 816.6 599 67.3
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 1.8e-233 812.8 598 67.9
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 3.0e-233 812.0 605 68.1
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.1e-230 802.0 595 67.2
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 7.7e-229 797.3 593 67.6
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 2.9e-228 795.4 601 66.7
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.1e-227 793.5 599 65.8
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 4.2e-227 791.6 603 65.7
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 4.7e-226 788.1 633 64.0
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 5.1e-225 784.6 593 65.4
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 5.1e-225 784.6 605 65.0
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 5.1e-225 784.6 616 65.4
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 5.7e-224 781.2 599 65.6
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 2.8e-223 778.9 604 65.4
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 4.8e-223 778.1 605 65.6
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 1.4e-222 776.5 613 64.4
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 5.3e-222 774.6 595 65.0
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 7.0e-222 774.2 596 65.6
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 1.2e-221 773.5 619 64.1
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 2.6e-221 772.3 628 64.3
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 7.7e-221 770.8 595 64.5
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 8.5e-220 767.3 603 65.3
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 2.5e-219 765.8 603 64.5
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 3.2e-219 765.4 598 63.9
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 9.4e-219 763.8 604 63.7
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 2.1e-218 762.7 604 64.6
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 2.7e-218 762.3 606 63.0
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 3.6e-218 761.9 604 64.6
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 1.1e-216 756.9 593 63.9
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 1.1e-216 756.9 606 62.9
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 1.1e-216 756.9 590 63.7
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 1.5e-216 756.5 608 63.2
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 2.0e-216 756.1 601 62.9
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 2.0e-216 756.1 597 64.3
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 2.6e-216 755.7 587 64.6
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 3.3e-216 755.4 589 64.0
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 2.2e-215 752.7 588 65.5
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 3.7e-215 751.9 597 63.3
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 8.2e-215 750.7 590 63.9
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 8.2e-215 750.7 597 63.3
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 8.2e-215 750.7 586 64.3
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 1.1e-214 750.4 584 64.7
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 1.4e-214 750.0 590 64.2
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 2.4e-214 749.2 592 63.5
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 2.4e-214 749.2 597 63.3
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 2.4e-214 749.2 600 63.8
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 3.1e-214 748.8 594 63.8
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 4.1e-214 748.4 597 63.0
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 2.0e-213 746.1 591 65.1
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 4.5e-213 745.0 597 63.3
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 1.0e-212 743.8 588 62.9
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 2.9e-212 742.3 593 63.2
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 2.9e-212 742.3 597 61.3
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 3.8e-212 741.9 598 61.4
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 1.9e-211 739.6 603 60.5
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 9.4e-211 737.3 593 62.7
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 1.2e-210 736.9 597 61.1
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 1.6e-210 736.5 603 61.0
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 1.8e-209 733.0 592 62.3
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 2.3e-209 732.6 584 62.2
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 4.0e-209 731.9 589 61.8
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 6.7e-209 731.1 601 60.9
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 1.2e-208 730.3 561 64.7
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 2.6e-208 729.2 603 60.7
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 5.7e-208 728.0 598 60.7
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 6.3e-207 724.5 581 60.8
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 2.4e-206 722.6 604 60.8
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 5.3e-206 721.5 597 60.0
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 7.0e-206 721.1 581 61.6
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 2.0e-205 719.5 613 61.0
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 1.0e-204 717.2 607 60.3
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.2e-204 716.1 600 60.0
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 3.8e-204 715.3 603 58.5
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 8.5e-204 714.1 604 58.9
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 1.1e-203 713.8 540 67.0
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 1.1e-203 713.8 602 59.0
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 1.5e-203 713.4 580 60.5
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 4.2e-203 711.8 602 59.1
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 1.2e-202 710.3 582 61.7
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 1.6e-202 709.9 596 58.4
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 8.0e-202 707.6 589 60.4
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 1.8e-201 706.4 608 59.0
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 2.3e-201 706.1 506 66.2
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 5.2e-201 704.9 607 58.8
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 6.8e-201 704.5 604 58.3
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 3.4e-200 702.2 610 59.3
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 8.3e-199 697.6 597 59.0
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 1.1e-198 697.2 548 63.5
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 1.1e-198 697.2 601 59.9
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 9.1e-198 694.1 597 59.6
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 4.5e-197 691.8 592 61.0
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 5.9e-197 691.4 604 58.9
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 1.3e-196 690.3 593 60.5
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 5.4e-190 668.3 596 57.0
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 2.0e-189 666.4 596 56.9
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 2.0e-189 666.4 597 57.6
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 2.0e-189 666.4 520 66.2
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 7.8e-189 664.5 600 57.2
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 7.8e-189 664.5 600 57.2
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 1.7e-188 663.3 596 60.2
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.9e-188 662.5 600 57.3
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 1.9e-187 659.8 598 57.5
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 8.0e-186 654.4 600 56.8
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 2.3e-185 652.9 568 58.1
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 4.0e-185 652.1 600 56.5
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 8.3e-183 644.4 581 56.1
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 8.0e-178 627.9 579 56.6
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 9.8e-176 620.9 590 54.4
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 1.0e-172 610.9 598 53.5
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 1.4e-169 600.5 478 61.9
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 1.8e-169 600.1 599 53.4
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 9.9e-168 594.3 620 51.8
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 1.1e-163 580.9 589 53.1
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 4.6e-157 558.9 593 51.6
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 2.0e-152 543.5 465 60.0
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.5e-147 527.3 428 62.6
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 1.1e-145 521.2 735 42.9
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 2.6e-128 463.4 394 63.2
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 1.8e-121 440.7 628 41.9
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 3.8e-119 433.0 453 47.7
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 1.8e-116 424.1 314 65.6
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.5e-115 421.0 317 67.5
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 2.0e-115 420.6 609 41.4
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 4.8e-114 416.0 498 45.8
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 3.2e-110 403.3 358 60.3
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.8e-97 360.9 354 55.1
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 1.5e-83 314.7 267 60.7
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 1.3e-82 311.6 608 35.7
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 1.5e-75 288.1 637 33.4
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 7.3e-70 269.2 189 67.7
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 7.0e-65 252.7 183 68.3
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 6.2e-61 239.6 219 53.9
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 2.3e-60 237.7 349 45.0
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 2.9e-58 230.7 162 67.3
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.9e-55 220.3 136 72.8
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 6.6e-39 166.4 119 65.5
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 1.3e-37 162.2 123 63.4
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 6.4e-34 149.8 171 52.0
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 2.1e-32 144.8 113 61.1
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 2.7e-32 144.4 113 61.1
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 2.5e-30 137.9 80 80.0
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 6.2e-29 133.3 101 65.3
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 1.1e-28 132.5 80 76.2
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.8e-28 131.7 101 64.4
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 3.1e-28 131.0 117 58.1
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 3.2e-25 120.9 189 40.7
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 8.7e-23 112.8 82 67.1
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 9.6e-22 109.4 180 41.7
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 1.1e-17 95.9 122 45.9
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 4.3e-14 84.0 137 43.1
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 5.7e-14 83.6 60 61.7
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 1.3e-13 82.4 76 56.6
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 6.9e-12 76.6 74 54.1
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 3.5e-08 64.3 44 72.7
Zm00001eb053920 Zea mays HOM05D004159 ORTHO05D021100 5.1e-07 60.5 41 70.7


User provided reference genes

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