Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 1.6e-141 506.5 339 100.0
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 4.1e-126 455.3 340 91.8
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 1.0e-44 184.9 369 45.5
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 6.5e-39 165.6 284 40.5
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 6.5e-39 165.6 398 34.2
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 3.2e-38 163.3 367 36.0
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 7.2e-38 162.2 255 42.7
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 2.1e-37 160.6 346 38.2
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 8.0e-37 158.7 285 40.0
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 1.4e-36 157.9 285 41.1
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 1.8e-36 157.5 370 37.8
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 4.0e-36 156.4 285 41.8
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 5.2e-36 156.0 369 35.5
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 5.2e-36 156.0 285 40.4
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 2.6e-35 153.7 268 41.8
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 5.7e-35 152.5 256 42.6
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 7.5e-35 152.1 362 34.5
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 1.7e-34 151.0 264 40.5
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 2.2e-34 150.6 283 37.5
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 2.2e-34 150.6 284 37.7
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 4.8e-34 149.4 284 37.0
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 4.8e-34 149.4 378 34.9
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 6.3e-34 149.1 269 43.1
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 6.3e-34 149.1 254 41.7
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 6.3e-34 149.1 365 37.0
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 6.3e-34 149.1 265 39.2
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 8.3e-34 148.7 272 39.3
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 1.4e-33 147.9 283 38.2
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 1.8e-33 147.5 362 34.3
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 3.1e-33 146.7 259 40.9
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 4.1e-33 146.4 266 40.6
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 5.3e-33 146.0 353 35.7
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 7.0e-33 145.6 363 33.1
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 9.1e-33 145.2 261 41.0
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 9.1e-33 145.2 362 35.1
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 1.6e-32 144.4 374 34.2
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 2.7e-32 143.7 364 34.1
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 3.5e-32 143.3 293 36.2
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 5.9e-32 142.5 283 39.9
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 7.7e-32 142.1 257 38.5
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 1.0e-31 141.7 282 39.7
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 1.7e-31 141.0 283 39.9
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 1.7e-31 141.0 282 37.9
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 2.2e-31 140.6 297 38.7
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 2.9e-31 140.2 370 31.9
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 8.5e-31 138.7 280 38.2
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 1.1e-30 138.3 254 38.2
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 1.9e-30 137.5 371 32.6
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 2.5e-30 137.1 345 35.1
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 3.2e-30 136.7 256 38.7
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 4.2e-30 136.3 281 38.4
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 5.5e-30 136.0 293 38.2
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 9.4e-30 135.2 375 32.3
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 1.2e-29 134.8 363 32.5
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 2.1e-29 134.0 262 38.5
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 2.1e-29 134.0 311 36.0
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 3.6e-29 133.3 342 33.0
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 4.7e-29 132.9 284 36.6
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 6.1e-29 132.5 264 38.3
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 8.0e-29 132.1 369 37.1
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 3.0e-28 130.2 257 38.5
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 5.2e-28 129.4 279 36.6
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 6.8e-28 129.0 279 36.2
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 6.8e-28 129.0 258 38.4
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 8.8e-28 128.6 278 35.6
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 8.8e-28 128.6 235 41.7
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 8.8e-28 128.6 262 34.4
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.5e-27 127.9 282 35.1
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 1.5e-27 127.9 278 34.9
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 2.0e-27 127.5 376 30.6
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 2.6e-27 127.1 317 33.1
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.4e-27 126.3 281 36.7
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 5.7e-27 125.9 282 35.8
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 1.3e-26 124.8 258 36.0
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 3.7e-26 123.2 257 37.7
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 4.8e-26 122.9 311 34.1
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 8.3e-26 122.1 344 31.7
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 3.1e-25 120.2 346 30.9
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 5.4e-25 119.4 274 35.4
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 9.1e-25 118.6 259 39.4
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 1.6e-24 117.9 266 35.3
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 1.0e-23 115.2 266 34.2
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 2.9e-23 113.6 282 41.8
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 1.5e-22 111.3 283 32.5
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 1.9e-22 110.9 267 35.2
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 1.9e-22 110.9 267 35.2
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 2.5e-22 110.5 376 31.9
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 1.2e-21 108.2 233 34.3
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 1.6e-21 107.8 278 34.2
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 4.7e-21 106.3 243 35.0
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 6.1e-21 105.9 258 34.1
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 8.0e-21 105.5 314 32.5
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 1.0e-20 105.1 242 36.4
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 1.4e-20 104.8 268 33.6
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 5.2e-20 102.8 266 33.5
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 6.8e-20 102.4 125 51.2
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 8.9e-20 102.1 130 50.0
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 1.2e-19 101.7 269 34.6
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 1.2e-19 101.7 269 34.6
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 1.2e-19 101.7 103 54.4
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 1.2e-19 101.7 103 54.4
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 1.2e-19 101.7 103 54.4
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 1.7e-18 97.8 266 32.0
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 3.2e-17 93.6 122 44.3
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 2.7e-16 90.5 284 30.3
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 4.5e-16 89.7 63 68.3
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 2.3e-15 87.4 63 66.7
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 8.6e-15 85.5 60 68.3
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 2.8e-13 80.5 238 31.5
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 6.1e-13 79.3 158 36.1
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.0e-12 78.6 309 31.1
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 4.0e-12 76.6 247 36.4
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 4.0e-12 76.6 57 68.4
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 4.0e-12 76.6 62 58.1
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 2.6e-11 73.9 58 60.3
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 2.2e-10 70.9 53 64.2
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 7.0e-09 65.9 120 38.3
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 9.2e-09 65.5 64 54.7
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 2.3e-07 60.8 48 58.3
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 7.3e-06 55.8 54 48.1
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 7.3e-06 55.8 54 48.1


User provided reference genes

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