Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO013G0066 Papaver somniferum HOM05D000392 ORTHO05D002065 1.0e-102 376.7 190 100.0
PSO210G1678 Papaver somniferum HOM05D000392 ORTHO05D002065 7.9e-50 201.1 148 69.6
Rhsim01G0238600 Rhododendron simsii HOM05D000002 ORTHO05D002065 1.6e-42 176.8 200 49.5
Rhsim07G0041900 Rhododendron simsii HOM05D000002 ORTHO05D002065 7.9e-42 174.5 196 48.5
Rhsim03G0114900 Rhododendron simsii HOM05D000002 ORTHO05D002065 5.6e-40 168.3 201 48.3
Sopen07g029130 Solanum pennellii HOM05D000002 ORTHO05D002065 9.0e-38 161.0 194 46.9
Sopen12g007900 Solanum pennellii HOM05D000002 ORTHO05D002065 9.0e-38 161.0 194 46.9
Sopen03g014380 Solanum pennellii HOM05D000002 ORTHO05D002065 7.6e-37 157.9 168 51.8
HanXRQChr17g0541591 Helianthus annuus HOM05D000002 ORTHO05D002065 1.0e-36 157.5 181 49.7
Sopen10g028630 Solanum pennellii HOM05D000002 ORTHO05D002065 1.0e-36 157.5 194 45.4
ECA248G3881 Erigeron canadensis HOM05D000392 ORTHO05D000610 1.3e-36 157.1 168 51.2
Sopen03g010500 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-36 157.1 165 52.1
Sopen01g001570 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen01g005920 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen02g010090 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen02g017660 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen02g030500 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen03g036760 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen04g006280 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen04g018150 Solanum pennellii HOM05D000006 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen04g023800 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen04g025720 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen04g026730 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen05g001590 Solanum pennellii HOM05D000392 ORTHO05D000001 1.7e-36 156.8 178 49.4
Sopen05g006720 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen05g008440 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen05g014110 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen06g003740 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen06g019790 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen06g020490 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen06g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen06g025370 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen06g029030 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen07g004880 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen07g006140 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen07g020050 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen07g028380 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen07g032760 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen07g033180 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen08g008670 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen08g017740 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen08g029640 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen09g007350 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen09g007940 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen09g010790 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen09g015720 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen09g027600 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen09g031920 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen10g006660 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen10g010780 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen10g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen10g021340 Solanum pennellii HOM05D003930 ORTHO05D004742 1.7e-36 156.8 178 49.4
Sopen10g023800 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen11g026270 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen12g020430 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen12g023100 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-36 156.8 178 49.4
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 2.2e-36 156.4 174 48.9
Sopen01g017650 Solanum pennellii HOM05D000002 ORTHO05D002065 4.9e-36 155.2 194 45.9
Sopen12g008380 Solanum pennellii HOM05D000002 ORTHO05D002065 4.9e-36 155.2 194 45.9
Sopen01g036580 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-35 154.1 194 45.4
Sopen02g013820 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-35 154.1 194 45.4
Sopen03g006780 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-35 154.1 194 45.4
Sopen04g007530 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-35 154.1 194 45.4
Sopen04g029040 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-35 154.1 194 45.4
Sopen06g006170 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-35 154.1 194 45.4
Sopen06g028770 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-35 154.1 194 45.4
Sopen11g008810 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-35 154.1 194 45.4
Sopen11g017390 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-35 154.1 194 45.4
Sopen11g024400 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-35 154.1 194 45.4
Sopen03g030560 Solanum pennellii HOM05D000002 ORTHO05D002065 3.2e-35 152.5 194 45.4
Sopen05g027020 Solanum pennellii HOM05D000002 ORTHO05D002065 3.2e-35 152.5 124 58.9
PSO339G5747 Papaver somniferum HOM05D000392 ORTHO05D002065 7.1e-35 151.4 155 53.5
RcHm_v2.0_Chr7g0218471 Rosa chinensis HOM05D000002 ORTHO05D002065 2.7e-34 149.4 141 53.2
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 2.7e-34 149.4 165 47.9
Sopen08g012500 Solanum pennellii HOM05D000002 ORTHO05D002065 3.5e-34 149.1 194 44.8
Sopen10g006760 Solanum pennellii HOM05D000002 ORTHO05D002065 3.5e-34 149.1 164 49.4
CAN.G151.18 Capsicum annuum HOM05D000541 ORTHO05D000137 4.6e-34 148.7 122 60.7
ECA246G4272 Erigeron canadensis HOM05D000392 ORTHO05D002065 1.8e-33 146.7 175 47.4
Sopen01g006130 Solanum pennellii HOM05D000002 ORTHO05D002065 2.3e-33 146.4 166 47.0
Sopen04g024530 Solanum pennellii HOM05D000002 ORTHO05D002065 2.3e-33 146.4 166 47.0
Sopen05g021470 Solanum pennellii HOM05D000002 ORTHO05D002065 2.3e-33 146.4 166 47.0
Sopen05g029240 Solanum pennellii HOM05D000392 ORTHO05D002065 2.3e-33 146.4 166 47.0
Sopen08g025440 Solanum pennellii HOM05D000002 ORTHO05D002065 2.3e-33 146.4 166 47.0
Sopen09g024720 Solanum pennellii HOM05D000392 ORTHO05D002065 2.3e-33 146.4 166 47.0
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-33 146.4 166 47.0
Sopen09g029440 Solanum pennellii HOM05D000002 ORTHO05D002065 2.3e-33 146.4 166 47.0
Sopen11g010460 Solanum pennellii HOM05D000002 ORTHO05D002065 2.3e-33 146.4 166 47.0
Sopen11g025130 Solanum pennellii HOM05D000002 ORTHO05D002065 2.3e-33 146.4 166 47.0
Sopen12g009220 Solanum pennellii HOM05D000392 ORTHO05D002065 2.3e-33 146.4 166 47.0
Sopen01g024170 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-33 146.0 166 47.6
Sopen01g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-33 146.0 166 47.6
Sopen02g016360 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-33 146.0 166 47.6
Sopen03g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-33 146.0 166 47.6
Sopen04g027510 Solanum pennellii HOM05D002075 ORTHO05D002065 3.0e-33 146.0 166 47.6
Sopen05g014660 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-33 146.0 166 47.6
Sopen05g026510 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-33 146.0 166 47.6
Sopen06g014830 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-33 146.0 166 47.6
Sopen07g029700 Solanum pennellii HOM05D000392 ORTHO05D002065 3.0e-33 146.0 166 47.6
Sopen08g005170 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-33 146.0 166 47.6
Sopen11g015820 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-33 146.0 166 47.6
Sopen12g021690 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-33 146.0 166 47.6
Sopen05g008480 Solanum pennellii HOM05D000002 ORTHO05D002065 3.9e-33 145.6 124 58.1
RcHm_v2.0_Chr2g0163801 Rosa chinensis HOM05D000002 ORTHO05D002065 1.1e-32 144.1 200 40.0
RcHm_v2.0_Chr1g0367381 Rosa chinensis HOM05D000002 ORTHO05D002065 4.3e-32 142.1 189 44.4
RcHm_v2.0_Chr7g0186831 Rosa chinensis HOM05D000002 ORTHO05D002065 5.7e-32 141.7 177 41.2
Sopen03g021110 Solanum pennellii HOM05D000392 ORTHO05D002065 1.3e-31 140.6 177 46.3
Sopen01g019060 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-31 139.0 166 45.8
Sopen02g022990 Solanum pennellii HOM05D000392 ORTHO05D001257 3.7e-31 139.0 111 61.3
Sopen06g012160 Solanum pennellii HOM05D000002 ORTHO05D002065 1.8e-30 136.7 166 44.0
Sopen09g011890 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-30 136.7 163 45.4
Sopen04g013080 Solanum pennellii HOM05D000002 ORTHO05D002065 5.3e-30 135.2 200 42.0
ECA232G3918 Erigeron canadensis HOM05D000392 ORTHO05D002065 2.0e-29 133.3 118 55.9
Sopen11g016080 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-29 132.9 108 60.2
Sopen01g028820 Solanum pennellii HOM05D000392 ORTHO05D000610 3.4e-29 132.5 124 54.0
Sopen05g025330 Solanum pennellii HOM05D000002 ORTHO05D002065 1.0e-28 131.0 166 46.4
Sopen05g009350 Solanum pennellii HOM05D000002 ORTHO05D002065 5.0e-28 128.6 162 48.1
FvH4_4g13933 Fragaria vesca HOM05D000002 ORTHO05D002065 1.1e-27 127.5 171 40.9
ECA240G3077 Erigeron canadensis HOM05D002958 ORTHO05D003558 1.9e-27 126.7 113 56.6
FvH4_6g39331 Fragaria vesca HOM05D000002 ORTHO05D002065 1.9e-27 126.7 171 40.4
FvH4_7g15611 Fragaria vesca HOM05D000392 ORTHO05D002065 6.1e-26 121.7 171 39.2
FvH4_6g44542 Fragaria vesca HOM05D000002 ORTHO05D002065 7.9e-26 121.3 205 35.6
Sopen06g018660 Solanum pennellii HOM05D000392 ORTHO05D002065 7.9e-26 121.3 158 44.9
FvH4_3g41702 Fragaria vesca HOM05D000002 ORTHO05D002065 5.1e-25 118.6 171 39.2
ECA233G3654 Erigeron canadensis HOM05D000392 ORTHO05D002065 3.7e-23 112.5 124 50.8
ECA236G2047 Erigeron canadensis HOM05D000002 ORTHO05D002065 6.3e-23 111.7 149 45.6
Medtr3g087960 Medicago truncatula HOM05D000392 ORTHO05D002065 2.4e-22 109.8 140 45.7
PSO541G5350 Papaver somniferum HOM05D000392 ORTHO05D002065 5.3e-22 108.6 70 70.0
ECA247G2202 Erigeron canadensis HOM05D000392 ORTHO05D002065 1.4e-19 100.5 119 47.1
FvH4_2g36192 Fragaria vesca HOM05D000392 ORTHO05D002065 1.4e-19 100.5 75 58.7
Sopen09g030360 Solanum pennellii HOM05D000002 ORTHO05D002065 9.4e-19 97.8 131 45.0
SHI17322 Sapria himalayana HOM05D000392 ORTHO05D002065 8.8e-17 91.3 82 54.9
Sopen02g003850 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-15 85.9 115 47.0
Sopen01g026180 Solanum pennellii HOM05D000002 ORTHO05D002065 4.1e-14 82.4 194 32.0
PSO478G0470 Papaver somniferum HOM05D000392 ORTHO05D000610 9.1e-14 81.3 49 73.5
Sopen12g028980 Solanum pennellii HOM05D000002 ORTHO05D002065 1.5e-13 80.5 138 38.4
ClCG08G000360 Citrullus lanatus HOM05D000743 ORTHO05D000580 3.4e-13 79.3 108 42.6
Sopen03g009140 Solanum pennellii HOM05D000392 ORTHO05D002065 1.0e-12 77.8 71 52.1
SHI17355 Sapria himalayana HOM05D000392 ORTHO05D000610 1.4e-11 73.9 57 57.9
Sopen05g016150 Solanum pennellii HOM05D000002 ORTHO05D002065 4.2e-11 72.4 118 43.2
SHI03610 Sapria himalayana HOM05D000392 ORTHO05D000610 1.6e-10 70.5 66 53.0
SHI26112 Sapria himalayana HOM05D000392 ORTHO05D001257 7.9e-10 68.2 44 65.9
SHI28752 Sapria himalayana HOM05D000392 ORTHO05D002065 7.9e-10 68.2 75 45.3
SHI04535 Sapria himalayana HOM05D010133 ORTHO05D002065 1.8e-09 67.0 78 41.0
SHI25639 Sapria himalayana HOM05D000392 ORTHO05D000610 3.0e-09 66.2 66 45.5
ECA234G1106 Erigeron canadensis HOM05D000392 ORTHO05D002065 8.8e-09 64.7 63 50.8
PSO357G0244 Papaver somniferum HOM05D000392 ORTHO05D000610 8.8e-09 64.7 42 64.3
SHI21052 Sapria himalayana HOM05D000392 ORTHO05D002065 8.8e-09 64.7 61 54.1
Sopen01g021430 Solanum pennellii HOM05D002156 ORTHO05D002328 3.3e-08 62.8 61 52.5
TPR.G25331 Trifolium pratense HOM05D000002 ORTHO05D002065 9.7e-08 61.2 104 43.3
Sopen07g021750 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-07 60.5 107 38.3
RcHm_v2.0_Chr5g0012171 Rosa chinensis HOM05D000002 ORTHO05D002065 2.2e-07 60.1 140 33.6
SHI37498 Sapria himalayana HOM05D000392 ORTHO05D000610 2.8e-07 59.7 53 58.5
Gohir.A04G102050 Gossypium hirsutum HOM05D000392 ORTHO05D000610 4.8e-07 58.9 46 58.7
SHI32045 Sapria himalayana HOM05D000392 ORTHO05D000610 4.8e-07 58.9 46 56.5
Gohir.A10G171633 Gossypium hirsutum HOM05D000392 ORTHO05D000610 1.1e-06 57.8 46 56.5
Gohir.A12G032033 Gossypium hirsutum HOM05D000392 ORTHO05D000610 1.1e-06 57.8 49 53.1
Gohir.A05G217866 Gossypium hirsutum HOM05D000392 ORTHO05D000610 4.1e-06 55.8 46 56.5
ECA232G3016 Erigeron canadensis HOM05D000392 ORTHO05D002065 7.0e-06 55.1 77 42.9
SHI24098 Sapria himalayana HOM05D000349 ORTHO05D001782 9.1e-06 54.7 41 58.5


User provided reference genes

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