Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO013G0049 Papaver somniferum HOM05D003939 ORTHO05D013368 6.4e-51 203.8 101 100.0
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 2.7e-25 118.6 67 91.0
PSO063G3321 Papaver somniferum HOM05D003939 ORTHO05D005979 1.4e-18 96.3 69 76.8
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 7.0e-13 77.4 73 57.5
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 1.6e-12 76.3 73 52.1
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 2.6e-12 75.5 75 53.3
TAR371G1006 Trochodendron aralioides HOM05D003939 ORTHO05D005979 2.6e-12 75.5 75 56.0
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 1.3e-11 73.2 87 48.3
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 6.5e-11 70.9 89 47.2
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 1.9e-10 69.3 67 52.2
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 4.2e-10 68.2 69 49.3
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 9.4e-10 67.0 74 44.6
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 2.1e-09 65.9 75 50.7
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 2.1e-09 65.9 81 46.9
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 4.7e-09 64.7 67 50.7
Gohir.1Z049344 Gossypium hirsutum HOM05D003939 ORTHO05D005979 4.7e-09 64.7 81 46.9
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 6.1e-09 64.3 67 49.3
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 8.0e-09 63.9 64 50.0
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 1.4e-08 63.2 77 42.9
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 1.8e-08 62.8 77 40.3
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 1.8e-08 62.8 75 48.0
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 1.8e-08 62.8 65 47.7
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 2.3e-08 62.4 74 40.5
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 2.3e-08 62.4 74 45.9
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 3.0e-08 62.0 83 42.2
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 3.0e-08 62.0 69 46.4
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 3.0e-08 62.0 64 50.0
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 3.0e-08 62.0 66 47.0
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 4.0e-08 61.6 78 42.3
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 5.2e-08 61.2 78 42.3
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 5.2e-08 61.2 78 42.3
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 6.7e-08 60.8 62 56.5
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 6.7e-08 60.8 80 42.5
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 6.7e-08 60.8 80 42.5
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 8.8e-08 60.5 76 46.1
CiPaw.03G089600 Carya illinoinensis HOM05D003939 ORTHO05D005979 1.1e-07 60.1 64 48.4
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 1.1e-07 60.1 63 49.2
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 1.5e-07 59.7 73 46.6
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 1.5e-07 59.7 75 41.3
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 2.0e-07 59.3 68 45.6
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 2.0e-07 59.3 62 54.8
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 2.0e-07 59.3 75 42.7
HPP92_012253 Vanilla planifolia HOM05D003939 ORTHO05D005979 2.0e-07 59.3 86 39.5
HPP92_012298 Vanilla planifolia HOM05D003939 ORTHO05D005979 2.0e-07 59.3 86 39.5
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 2.6e-07 58.9 67 46.3
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 2.6e-07 58.9 68 48.5
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 3.3e-07 58.5 63 49.2
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 3.3e-07 58.5 74 37.8
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 4.4e-07 58.2 77 42.9
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 4.4e-07 58.2 74 36.5
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 4.4e-07 58.2 81 40.7
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 4.4e-07 58.2 71 40.8
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 5.7e-07 57.8 69 44.9
Glyma.19G029100 Glycine max HOM05D003939 ORTHO05D005979 5.7e-07 57.8 58 51.7
ClCG07G007370 Citrullus lanatus HOM05D003939 ORTHO05D005979 9.7e-07 57.0 75 40.0
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 1.3e-06 56.6 74 41.9
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 1.7e-06 56.2 62 48.4
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 1.7e-06 56.2 58 46.6
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 2.2e-06 55.8 62 45.2
C09p61560 Brassica napus HOM05D003939 ORTHO05D013368 2.8e-06 55.5 61 45.9
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 3.7e-06 55.1 56 46.4
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 4.8e-06 54.7 67 44.8
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 4.8e-06 54.7 60 45.0
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 4.8e-06 54.7 77 41.6
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 6.3e-06 54.3 73 43.8
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 8.2e-06 53.9 76 46.1


User provided reference genes

Program Settings