Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004669 Prasinoderma coloniale HOM05D005856 ORTHO05D007264 5.7e-273 943.7 502 100.0
QL03p053723 Quercus lobata HOM05D005856 ORTHO05D007264 1.3e-64 251.5 474 37.3
Cfa009330 Carpinus fangiana HOM05D005856 ORTHO05D007264 3.9e-64 250.0 477 37.5
GSVIVG01010446001 Vitis vinifera HOM05D005856 ORTHO05D007264 8.7e-64 248.8 412 38.1
Sc04g0010050 Simmondsia chinensis HOM05D005856 ORTHO05D007264 1.5e-63 248.1 461 37.1
MD13G1117100 Malus domestica HOM05D005856 ORTHO05D007264 1.9e-63 247.7 407 38.3
Manes.13G018400 Manihot esculenta HOM05D005856 ORTHO05D007264 4.3e-63 246.5 469 38.0
Prupe.1G228400 Prunus persica HOM05D005856 ORTHO05D007264 4.3e-63 246.5 410 38.3
THA.LOC104807593 Tarenaya hassleriana HOM05D005856 ORTHO05D007264 1.6e-62 244.6 456 37.9
arahy.Tifrunner.gnm1.ann1.E9QWSH Arachis hypogaea HOM05D005856 ORTHO05D007264 3.6e-62 243.4 502 35.7
ECA233G1277 Erigeron canadensis HOM05D005856 ORTHO05D007264 4.8e-62 243.0 420 38.6
Lsat_1_v5_gn_8_149340 Lactuca sativa HOM05D005856 ORTHO05D007264 4.8e-62 243.0 392 39.8
Potri.006G025300 Populus trichocarpa HOM05D005856 ORTHO05D007264 4.8e-62 243.0 468 36.3
Potri.016G023500 Populus trichocarpa HOM05D005856 ORTHO05D007264 4.8e-62 243.0 468 36.8
AagrBONN_evm.TU.Sc2ySwM_344.2476 Anthoceros agrestis HOM05D005856 ORTHO05D007264 6.2e-62 242.7 402 42.5
Atru.chr11.2307 Acer truncatum HOM05D005856 ORTHO05D007264 1.1e-61 241.9 467 36.4
PGR119G1218 Punica granatum HOM05D005856 ORTHO05D007264 1.4e-61 241.5 481 36.2
arahy.Tifrunner.gnm1.ann1.ID6EX5 Arachis hypogaea HOM05D005856 ORTHO05D007264 3.1e-61 240.4 492 35.8
Duzib248G0543 Durio zibethinus HOM05D005856 ORTHO05D007264 3.1e-61 240.4 480 35.2
Thhalv10019531m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 3.1e-61 240.4 471 37.6
ATR0561G073 Amborella trichopoda HOM05D005856 ORTHO05D007264 4.0e-61 240.0 410 38.0
Nitab4.5_0000379g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 6.9e-61 239.2 411 38.0
Hund06082 Selenicereus undatus HOM05D005856 ORTHO05D007264 6.9e-61 239.2 463 37.6
CANSAT01G0688 Cannabis sativa HOM05D005856 ORTHO05D007264 9.0e-61 238.8 471 36.1
COL.COLO4_20381 Corchorus olitorius HOM05D005856 ORTHO05D007264 1.5e-60 238.0 464 35.6
Haze_12395 Corylus avellana HOM05D005856 ORTHO05D007264 1.5e-60 238.0 460 37.0
CsaV3_6G032280 Cucumis sativus L. HOM05D005856 ORTHO05D007264 2.0e-60 237.7 479 36.1
Gorai.012G175300 Gossypium raimondii HOM05D005856 ORTHO05D007264 2.0e-60 237.7 463 35.9
Aa31sc1092G20 Aethionema arabicum HOM05D005856 ORTHO05D007264 2.6e-60 237.3 471 35.9
A07p34000 Brassica napus HOM05D005856 ORTHO05D007264 2.6e-60 237.3 417 39.1
BraA07t31027Z Brassica rapa HOM05D005856 ORTHO05D007264 2.6e-60 237.3 417 39.1
Eucgr.H04651 Eucalyptus grandis HOM05D005856 ORTHO05D007264 5.8e-60 236.1 446 36.8
Sp5g22410 Schrenkiella parvula HOM05D005856 ORTHO05D007264 5.8e-60 236.1 462 36.8
Solyc05g015310.3 Solanum lycopersicum HOM05D005856 ORTHO05D007264 5.8e-60 236.1 409 37.7
CSS0025471 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 7.6e-60 235.7 491 35.6
CBR_g49528 Chara braunii HOM05D005856 ORTHO05D007264 7.6e-60 235.7 429 37.1
Ciclev10031347m.g Citrus clementina HOM05D005856 ORTHO05D007264 7.6e-60 235.7 460 36.1
FAN07G1943 Fragaria x ananassa HOM05D005856 ORTHO05D007264 7.6e-60 235.7 479 36.1
Nitab4.5_0000367g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 7.6e-60 235.7 411 37.5
BcaB03g15198 Brassica carinata HOM05D005856 ORTHO05D007264 9.9e-60 235.3 472 36.9
FvH4_4g23940 Fragaria vesca HOM05D005856 ORTHO05D007264 9.9e-60 235.3 479 36.1
SGA_v2.0_scaffold135G34936 Striga asiatica HOM05D005856 ORTHO05D007264 9.9e-60 235.3 463 36.3
BcaC08g46160 Brassica carinata HOM05D005856 ORTHO05D007264 1.3e-59 235.0 417 38.8
Peaxi162Scf00128g01130 Petunia axillaris HOM05D005856 ORTHO05D007264 1.3e-59 235.0 409 37.7
EL10Ac6g13483 Beta vulgaris HOM05D005856 ORTHO05D007264 1.7e-59 234.6 461 36.0
FAN22G0691 Fragaria x ananassa HOM05D005856 ORTHO05D007264 2.2e-59 234.2 479 36.1
Thecc.02G210800 Theobroma cacao HOM05D005856 ORTHO05D007264 2.2e-59 234.2 480 35.0
AL2G26010 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 2.9e-59 233.8 475 36.6
Psat5g095080 Pisum sativum HOM05D005856 ORTHO05D007264 2.9e-59 233.8 461 35.6
Sopen05g010580 Solanum pennellii HOM05D005856 ORTHO05D007264 2.9e-59 233.8 409 37.4
CARHR059980 Cardamine hirsuta HOM05D005856 ORTHO05D007264 3.8e-59 233.4 473 37.0
Lalb_Chr11g0075741 Lupinus albus HOM05D005856 ORTHO05D007264 3.8e-59 233.4 461 35.4
PGSC0003DMG400015053 Solanum tuberosum HOM05D005856 ORTHO05D007264 3.8e-59 233.4 399 37.3
Os04g0381600 Oryza sativa ssp. japonica HOM05D005856 ORTHO05D007264 4.9e-59 233.0 409 38.9
CiPaw.05G111700 Carya illinoinensis HOM05D005856 ORTHO05D007264 6.4e-59 232.6 430 37.2
SEGI_12163 Sequoiadendron giganteum HOM05D005856 ORTHO05D007264 6.4e-59 232.6 408 38.7
Carub.0002s1377 Capsella rubella HOM05D005856 ORTHO05D007264 8.4e-59 232.3 417 38.8
FAN17G0012 Fragaria x ananassa HOM05D005856 ORTHO05D007264 8.4e-59 232.3 479 36.3
Rhsim12G0099000 Rhododendron simsii HOM05D005856 ORTHO05D007264 8.4e-59 232.3 462 36.4
HPP92_024239 Vanilla planifolia HOM05D005856 ORTHO05D007264 8.4e-59 232.3 451 36.8
Gohir.A04G139000 Gossypium hirsutum HOM05D005856 ORTHO05D007264 1.4e-58 231.5 463 36.1
Pp3c14_19540 Physcomitrium patens HOM05D005856 ORTHO05D007264 1.4e-58 231.5 397 39.8
TWI36G0309 Tripterygium wilfordii HOM05D005856 ORTHO05D007264 1.4e-58 231.5 448 35.7
Mapoly0076s0016 Marchantia polymorpha HOM05D005856 ORTHO05D007264 1.9e-58 231.1 500 35.8
RcHm_v2.0_Chr4g0430601 Rosa chinensis HOM05D005856 ORTHO05D007264 1.9e-58 231.1 466 37.1
MELO3C011452.2 Cucumis melo HOM05D005856 ORTHO05D007264 2.4e-58 230.7 480 35.4
CAN.G43.18 Capsicum annuum HOM05D005856 ORTHO05D007264 3.2e-58 230.3 409 37.2
Oeu036879.1 Olea europaea HOM05D005856 ORTHO05D007264 3.2e-58 230.3 456 37.5
TAR622G1129 Trochodendron aralioides HOM05D005856 ORTHO05D007264 3.2e-58 230.3 461 36.2
Aqoxy5G03410 Aquilegia oxysepala HOM05D005856 ORTHO05D007264 4.2e-58 229.9 471 35.0
ClCG08G010110 Citrullus lanatus HOM05D005856 ORTHO05D007264 4.2e-58 229.9 480 35.4
Lj3g0022861 Lotus japonicus HOM05D005856 ORTHO05D007264 7.1e-58 229.2 436 36.2
Actinidia20701 Actinidia chinensis HOM05D005856 ORTHO05D007264 9.3e-58 228.8 461 36.2
AT1G67440 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 9.3e-58 228.8 415 38.8
AUR62024126 Chenopodium quinoa HOM05D005856 ORTHO05D007264 9.3e-58 228.8 436 37.4
Sabra06G0018600 Salix brachista HOM05D005856 ORTHO05D007264 9.3e-58 228.8 497 35.0
VMungo1383G1560 Vigna mungo HOM05D005856 ORTHO05D007264 1.2e-57 228.4 447 35.3
Glyma.18G007700 Glycine max HOM05D005856 ORTHO05D007264 2.7e-57 227.3 472 35.2
Glyma.11G249500 Glycine max HOM05D005856 ORTHO05D007264 3.5e-57 226.9 460 35.4
Lj3A1066G66 Lonicera japonica HOM05D005856 ORTHO05D007264 3.5e-57 226.9 399 37.3
Medtr3g085550 Medicago truncatula HOM05D005856 ORTHO05D007264 4.6e-57 226.5 460 34.8
SalBow1G2377 Salvia bowleyana HOM05D005856 ORTHO05D007264 4.6e-57 226.5 460 36.1
Sed0007662 Sechium edule HOM05D005856 ORTHO05D007264 4.6e-57 226.5 472 35.0
SMO236G0063 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 4.6e-57 226.5 412 37.9
PSO782G2456 Papaver somniferum HOM05D005856 ORTHO05D007264 6.0e-57 226.1 410 37.1
Migut.H00051 Erythranthe guttata HOM05D005856 ORTHO05D007264 1.0e-56 225.3 469 35.4
TPR.G28278 Trifolium pratense HOM05D005856 ORTHO05D007264 1.0e-56 225.3 404 37.1
CDE05G3252 Ceratophyllum demersum HOM05D005856 ORTHO05D007264 5.1e-56 223.0 455 35.6
MCO13G068 Micromonas commoda HOM05D005856 ORTHO05D007264 1.1e-55 221.9 427 38.4
AUR62005603 Chenopodium quinoa HOM05D005856 ORTHO05D007264 1.9e-55 221.1 449 36.3
Nn4g22353 Nelumbo nucifera HOM05D005856 ORTHO05D007264 1.9e-55 221.1 344 41.0
Phvul.001G260800 Phaseolus vulgaris HOM05D005856 ORTHO05D007264 1.9e-55 221.1 349 39.0
DCAR_031194 Daucus carota HOM05D005856 ORTHO05D007264 5.6e-55 219.5 434 35.7
unitig_88.g27631 Utricularia gibba HOM05D005856 ORTHO05D007264 1.6e-54 218.0 511 33.7
HanXRQChr08g0207721 Helianthus annuus HOM05D005856 ORTHO05D007264 3.7e-54 216.9 474 34.4
HPP92_013615 Vanilla planifolia HOM05D005856 ORTHO05D007264 1.4e-53 214.9 344 40.1
CSS0003803 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 2.4e-53 214.2 542 32.1
Cpa.g.sc351.3 Carica papaya HOM05D005856 ORTHO05D007264 6.9e-53 212.6 480 35.2
Sp5g22430 Schrenkiella parvula HOM05D005856 ORTHO05D007264 1.2e-52 211.8 388 36.9
Cre10.g436600 Chlamydomonas reinhardtii HOM05D005856 ORTHO05D007264 4.5e-52 209.9 584 34.4
Dinv14826 Davidia involucrata HOM05D005856 ORTHO05D007264 1.7e-51 208.0 410 36.3
AL2G26030 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 1.9e-50 204.5 388 36.1
C06p42840 Brassica napus HOM05D005856 ORTHO05D007264 3.2e-50 203.8 417 36.2
Zm00001eb420890 Zea mays HOM05D005856 ORTHO05D007264 9.3e-50 202.2 408 34.8
Manes.12G012850 Manihot esculenta HOM05D005856 ORTHO05D007264 3.5e-49 200.3 355 39.2
BolC6t39153H Brassica oleracea HOM05D005856 ORTHO05D007264 4.6e-49 199.9 417 36.2
Thhalv10019423m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 1.8e-48 198.0 382 34.3
Ca_16469_v3 Cicer arietinum L. HOM05D005856 ORTHO05D007264 3.7e-46 190.3 297 39.4
Ah.03g136240 Amaranthus hybridus HOM05D005856 ORTHO05D007264 4.6e-41 173.3 290 41.0
PSO063G1304 Papaver somniferum HOM05D005856 ORTHO05D007264 2.5e-39 167.5 409 32.3
Cc11_g00900 Coffea canephora HOM05D005856 ORTHO05D007264 4.8e-38 163.3 344 34.0
Gohir.D04G181900 Gossypium hirsutum HOM05D005856 ORTHO05D007264 1.2e-36 158.7 463 29.4
CARHR068030 Cardamine hirsuta HOM05D005856 ORTHO05D007264 1.7e-35 154.8 392 31.6
AT1G67460 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 2.8e-30 137.5 161 43.5
Carub.0002s1379 Capsella rubella HOM05D005856 ORTHO05D007264 3.7e-30 137.1 204 39.2
AUR62005602 Chenopodium quinoa HOM05D005856 ORTHO05D007264 4.8e-30 136.7 204 41.7
FAN12G0203 Fragaria x ananassa HOM05D005856 ORTHO05D007264 1.1e-29 135.6 305 34.8
Actinidia26816 Actinidia chinensis HOM05D005856 ORTHO05D007264 4.1e-29 133.7 330 32.4
ECA240G4225 Erigeron canadensis HOM05D005856 ORTHO05D007264 7.2e-18 96.3 154 39.6
MD07G1133300 Malus domestica HOM05D005856 ORTHO05D007264 1.8e-13 81.6 93 41.9
SMO199G0068 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 9.7e-07 59.3 107 33.6
Medtr3g085580 Medicago truncatula HOM05D005856 ORTHO05D007264 1.3e-06 58.9 58 50.0


User provided reference genes

Program Settings