Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003886 Prasinoderma coloniale HOM05D006551 ORTHO05D044110 6.3e-222 773.9 407 100.0
Cre03.g146087 Chlamydomonas reinhardtii HOM05D006551 ORTHO05D044110 7.1e-16 89.4 270 31.9
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 9.0e-11 72.4 185 29.7
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 2.0e-10 71.2 184 27.7
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 5.8e-10 69.7 180 29.4
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 7.6e-10 69.3 184 29.9
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 1.0e-09 68.9 202 29.2
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 1.3e-09 68.6 185 29.2
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 2.2e-09 67.8 178 29.8
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 2.2e-09 67.8 183 27.9
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 3.8e-09 67.0 185 29.2
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 3.8e-09 67.0 165 30.3
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 5.0e-09 66.6 178 28.7
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 5.0e-09 66.6 184 29.9
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 6.5e-09 66.2 185 29.2
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 1.1e-08 65.5 185 28.6
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 1.1e-08 65.5 181 29.8
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 1.4e-08 65.1 160 30.6
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 1.4e-08 65.1 184 28.8
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 1.4e-08 65.1 186 29.6
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 1.9e-08 64.7 190 27.9
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 1.9e-08 64.7 183 27.9
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 1.9e-08 64.7 184 28.8
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 1.9e-08 64.7 202 28.2
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 2.5e-08 64.3 192 27.6
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 3.2e-08 63.9 169 30.2
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 4.2e-08 63.5 179 28.5
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 4.2e-08 63.5 177 27.7
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 4.2e-08 63.5 189 28.0
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 4.2e-08 63.5 181 29.3
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 4.2e-08 63.5 181 29.3
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 5.5e-08 63.2 184 27.7
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 7.1e-08 62.8 171 28.7
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 7.1e-08 62.8 185 28.6
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 7.1e-08 62.8 185 28.6
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 7.1e-08 62.8 185 28.6
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 7.1e-08 62.8 185 28.6
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 9.3e-08 62.4 171 28.7
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 9.3e-08 62.4 182 28.6
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 1.2e-07 62.0 154 29.9
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 1.2e-07 62.0 180 26.7
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 1.6e-07 61.6 192 26.0
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 1.6e-07 61.6 190 27.4
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 1.6e-07 61.6 166 30.1
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 1.6e-07 61.6 178 28.1
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 2.1e-07 61.2 160 30.6
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 2.1e-07 61.2 162 27.2
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 2.1e-07 61.2 183 29.5
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 2.7e-07 60.8 190 26.3
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 2.7e-07 60.8 177 28.8
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 3.5e-07 60.5 171 28.1
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 3.5e-07 60.5 182 29.1
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 3.5e-07 60.5 181 28.7
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 6.1e-07 59.7 187 27.3
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 6.1e-07 59.7 183 27.9
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 6.1e-07 59.7 158 29.7
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 6.1e-07 59.7 216 27.8
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 7.9e-07 59.3 162 25.9
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 7.9e-07 59.3 167 27.5
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 1.0e-06 58.9 177 27.1
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 1.0e-06 58.9 179 26.8
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 1.0e-06 58.9 179 26.8
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 1.0e-06 58.9 188 26.6
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 1.0e-06 58.9 182 26.4
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 1.3e-06 58.5 183 26.8
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 1.3e-06 58.5 163 27.0
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 1.8e-06 58.2 185 28.6
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 2.3e-06 57.8 188 26.1
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 3.0e-06 57.4 190 25.3
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 3.0e-06 57.4 183 27.9
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 3.9e-06 57.0 158 27.8
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 5.1e-06 56.6 184 26.1
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 5.1e-06 56.6 180 26.7
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 5.1e-06 56.6 167 26.9
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 6.7e-06 56.2 184 25.5


User provided reference genes

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