Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003212 Prasinoderma coloniale HOM05D005914 ORTHO05D007361 1.6e-274 948.7 471 100.0
CiPaw.07G220900 Carya illinoinensis HOM05D005914 ORTHO05D007361 9.0e-71 271.9 421 40.4
QL02p022744 Quercus lobata HOM05D005914 ORTHO05D007361 9.0e-71 271.9 430 39.1
HanXRQChr13g0402741 Helianthus annuus HOM05D005914 ORTHO05D007361 1.5e-70 271.2 427 39.8
FAN24G3193 Fragaria x ananassa HOM05D005914 ORTHO05D007361 4.5e-70 269.6 419 39.6
FvH4_2g29650 Fragaria vesca HOM05D005914 ORTHO05D007361 5.8e-70 269.2 419 39.6
Migut.E01476 Erythranthe guttata HOM05D005914 ORTHO05D007361 7.6e-70 268.9 415 41.0
Rhsim02G0194500 Rhododendron simsii HOM05D005914 ORTHO05D007361 9.9e-70 268.5 419 38.2
Glyma.15G054900 Glycine max HOM05D005914 ORTHO05D007361 2.2e-69 267.3 417 38.8
Psat1g215880 Pisum sativum HOM05D005914 ORTHO05D007361 2.2e-69 267.3 423 40.0
Sp2g22050 Schrenkiella parvula HOM05D005914 ORTHO05D007361 4.9e-69 266.2 424 39.2
Ca_00145_v3 Cicer arietinum L. HOM05D005914 ORTHO05D007361 6.4e-69 265.8 423 38.8
Lj6g0019162 Lotus japonicus HOM05D005914 ORTHO05D007361 8.4e-69 265.4 424 38.0
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 1.1e-68 265.0 427 38.2
Haze_21570 Corylus avellana HOM05D005914 ORTHO05D007361 1.1e-68 265.0 442 37.8
Actinidia22373 Actinidia chinensis HOM05D005914 ORTHO05D007361 1.9e-68 264.2 419 38.2
TWI63G0300 Tripterygium wilfordii HOM05D005914 ORTHO05D007361 2.4e-68 263.8 432 37.7
Cfa013180 Carpinus fangiana HOM05D005914 ORTHO05D007361 3.2e-68 263.5 442 37.6
Gorai.004G274400 Gossypium raimondii HOM05D005914 ORTHO05D007361 3.2e-68 263.5 438 37.2
arahy.Tifrunner.gnm1.ann1.J9LH1L Arachis hypogaea HOM05D005914 ORTHO05D007361 4.2e-68 263.1 416 39.2
CSS0046358 Camellia sinensis var. sinensis HOM05D005914 ORTHO05D007361 4.2e-68 263.1 423 39.5
Eucgr.C01789 Eucalyptus grandis HOM05D005914 ORTHO05D007361 4.2e-68 263.1 433 38.8
PSO170G3156 Papaver somniferum HOM05D005914 ORTHO05D007361 5.4e-68 262.7 423 37.6
RcHm_v2.0_Chr6g0298621 Rosa chinensis HOM05D005914 ORTHO05D007361 5.4e-68 262.7 421 38.2
SGA_v2.0_scaffold4G02186 Striga asiatica HOM05D005914 ORTHO05D007361 7.1e-68 262.3 442 37.6
Lalb_Chr20g0122961 Lupinus albus HOM05D005914 ORTHO05D007361 9.3e-68 261.9 414 38.4
arahy.Tifrunner.gnm1.ann1.T9E77A Arachis hypogaea HOM05D005914 ORTHO05D007361 1.2e-67 261.5 418 39.0
A06p36180 Brassica napus HOM05D005914 ORTHO05D007361 1.2e-67 261.5 415 38.8
BraA06t26540Z Brassica rapa HOM05D005914 ORTHO05D007361 1.2e-67 261.5 415 38.8
Thhalv10004397m.g Eutrema salsugineum HOM05D005914 ORTHO05D007361 1.2e-67 261.5 424 38.4
EL10Ac2g02591 Beta vulgaris HOM05D005914 ORTHO05D007361 1.6e-67 261.2 435 38.2
Medtr2g009140 Medicago truncatula HOM05D005914 ORTHO05D007361 1.6e-67 261.2 417 38.6
SMO146G0196 Selaginella moellendorffii HOM05D005914 ORTHO05D007361 1.6e-67 261.2 424 37.0
Solyc08g067070.3 Solanum lycopersicum HOM05D005914 ORTHO05D007361 2.7e-67 260.4 419 37.7
Pp3c12_2410 Physcomitrium patens HOM05D005914 ORTHO05D007361 3.5e-67 260.0 483 36.2
Sopen08g021020 Solanum pennellii HOM05D005914 ORTHO05D007361 3.5e-67 260.0 420 37.6
VMungo0540G0716 Vigna mungo HOM05D005914 ORTHO05D007361 3.5e-67 260.0 439 37.8
Gohir.A08G236800 Gossypium hirsutum HOM05D005914 ORTHO05D007361 6.0e-67 259.2 419 37.2
Ciclev10008576m.g Citrus clementina HOM05D005914 ORTHO05D007361 7.9e-67 258.8 432 38.2
C07p42340 Brassica napus HOM05D005914 ORTHO05D007361 1.0e-66 258.5 416 38.9
THA.LOC104799221 Tarenaya hassleriana HOM05D005914 ORTHO05D007361 1.0e-66 258.5 420 37.6
unitig_747.g21653 Utricularia gibba HOM05D005914 ORTHO05D007361 1.0e-66 258.5 419 38.9
PGR142G2371 Punica granatum HOM05D005914 ORTHO05D007361 1.8e-66 257.7 419 37.7
Potri.006G250800 Populus trichocarpa HOM05D005914 ORTHO05D007361 3.0e-66 256.9 434 38.9
MELO3C011235.2 Cucumis melo HOM05D005914 ORTHO05D007361 5.1e-66 256.1 421 37.5
Sabra06G0196100 Salix brachista HOM05D005914 ORTHO05D007361 5.1e-66 256.1 430 37.7
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 6.7e-66 255.8 414 37.7
Thecc.09G149100 Theobroma cacao HOM05D005914 ORTHO05D007361 6.7e-66 255.8 425 36.7
CAN.G98.27 Capsicum annuum HOM05D005914 ORTHO05D007361 8.7e-66 255.4 421 37.1
GSVIVG01035808001 Vitis vinifera HOM05D005914 ORTHO05D007361 8.7e-66 255.4 423 39.0
Aqoxy7G02060 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 1.1e-65 255.0 426 38.5
TAR625G1283 Trochodendron aralioides HOM05D005914 ORTHO05D007361 1.1e-65 255.0 445 37.5
arahy.Tifrunner.gnm1.ann1.71PCZ9 Arachis hypogaea HOM05D005914 ORTHO05D007361 1.9e-65 254.2 379 40.1
Carub.0006s2334 Capsella rubella HOM05D005914 ORTHO05D007361 1.9e-65 254.2 420 37.9
CANSAT80G2406 Cannabis sativa HOM05D005914 ORTHO05D007361 2.5e-65 253.8 417 37.6
Atru.chr7.2376 Acer truncatum HOM05D005914 ORTHO05D007361 4.3e-65 253.1 432 36.6
AT5G25480 Arabidopsis thaliana HOM05D005914 ORTHO05D007361 4.3e-65 253.1 425 38.1
CANSAT80G0109 Cannabis sativa HOM05D005914 ORTHO05D007361 4.3e-65 253.1 417 37.6
Zm00001eb358040 Zea mays HOM05D005914 ORTHO05D007361 5.6e-65 252.7 416 38.2
HPP92_012620 Vanilla planifolia HOM05D005914 ORTHO05D007361 1.6e-64 251.1 423 37.1
AL6G37280 Arabidopsis lyrata HOM05D005914 ORTHO05D007361 2.1e-64 250.8 416 38.2
MCO14G456 Micromonas commoda HOM05D005914 ORTHO05D007361 2.8e-64 250.4 426 39.0
ClCG08G013130 Citrullus lanatus HOM05D005914 ORTHO05D007361 4.8e-64 249.6 425 36.7
Cc11_g01820 Coffea canephora HOM05D005914 ORTHO05D007361 6.2e-64 249.2 444 36.3
Lsat_1_v5_gn_6_22181 Lactuca sativa HOM05D005914 ORTHO05D007361 1.1e-63 248.4 408 38.2
Nn2g11936 Nelumbo nucifera HOM05D005914 ORTHO05D007361 1.1e-63 248.4 404 37.6
CDE04G0852 Ceratophyllum demersum HOM05D005914 ORTHO05D007361 4.0e-63 246.5 436 36.5
Mapoly0011s0185 Marchantia polymorpha HOM05D005914 ORTHO05D007361 5.3e-63 246.1 495 35.6
MD15G1120500 Malus domestica HOM05D005914 ORTHO05D007361 2.6e-62 243.8 422 36.3
Nitab4.5_0000151g0200 Nicotiana tabacum HOM05D005914 ORTHO05D007361 6.4e-61 239.2 420 35.2
CBR_g3173 Chara braunii HOM05D005914 ORTHO05D007361 9.3e-60 235.3 568 32.7
Gohir.D08G257400 Gossypium hirsutum HOM05D005914 ORTHO05D007361 3.5e-59 233.4 422 37.4
DCAR_006234 Daucus carota HOM05D005914 ORTHO05D007361 6.0e-59 232.6 475 33.5
Nitab4.5_0001669g0040 Nicotiana tabacum HOM05D005914 ORTHO05D007361 6.0e-59 232.6 414 34.8
SalBow2G3472 Salvia bowleyana HOM05D005914 ORTHO05D007361 1.3e-58 231.5 428 35.3
Sed0010731 Sechium edule HOM05D005914 ORTHO05D007361 5.3e-55 219.5 413 34.6
COL.COLO4_23983 Corchorus olitorius HOM05D005914 ORTHO05D007361 4.9e-53 213.0 425 34.4
Duzib150G0329 Durio zibethinus HOM05D005914 ORTHO05D007361 1.4e-52 211.5 422 34.4
Prupe.1G473200 Prunus persica HOM05D005914 ORTHO05D007361 3.0e-50 203.8 352 36.4
Manes.16G119400 Manihot esculenta HOM05D005914 ORTHO05D007361 3.9e-50 203.4 342 37.1
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 7.4e-49 199.1 322 38.2
ATR0815G040 Amborella trichopoda HOM05D005914 ORTHO05D007361 2.8e-48 197.2 359 36.5
AagrBONN_evm.TU.Sc2ySwM_228.810 Anthoceros agrestis HOM05D005914 ORTHO05D007361 1.1e-47 195.3 189 52.9
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 3.1e-47 193.7 381 35.2
Peaxi162Scf00341g00624 Petunia axillaris HOM05D005914 ORTHO05D007361 6.9e-47 192.6 375 33.1
AUR62024878 Chenopodium quinoa HOM05D005914 ORTHO05D007361 2.2e-45 187.6 404 31.9
Phvul.006G205000 Phaseolus vulgaris HOM05D005914 ORTHO05D007361 3.8e-45 186.8 328 37.8
AUR62030669 Chenopodium quinoa HOM05D005914 ORTHO05D007361 8.5e-45 185.7 182 50.5
PSO455G0041 Papaver somniferum HOM05D005914 ORTHO05D007361 2.5e-44 184.1 178 48.3
CsaV3_2G031850 Cucumis sativus L. HOM05D005914 ORTHO05D007361 2.1e-43 181.0 178 48.9
Dinv11618 Davidia involucrata HOM05D005914 ORTHO05D007361 2.1e-43 181.0 283 37.1
Os01g0612000 Oryza sativa ssp. japonica HOM05D005914 ORTHO05D007361 3.7e-40 170.2 178 48.3
CARHR187910 Cardamine hirsuta HOM05D005914 ORTHO05D007361 5.3e-39 166.4 177 46.9
Cpa.g.sc91.41 Carica papaya HOM05D005914 ORTHO05D007361 2.0e-38 164.5 181 46.4
FAN27G2538 Fragaria x ananassa HOM05D005914 ORTHO05D007361 3.4e-38 163.7 383 31.3
MCO11G560 Micromonas commoda HOM05D005914 ORTHO05D007361 3.9e-34 150.2 440 31.8
Ah.12g063960 Amaranthus hybridus HOM05D005914 ORTHO05D007361 8.8e-34 149.1 168 45.2
Cre12.g484600 Chlamydomonas reinhardtii HOM05D005914 ORTHO05D007361 4.1e-31 140.2 397 32.5
SEGI_35502 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 1.5e-30 138.3 111 58.6
MD08G1143700 Malus domestica HOM05D005914 ORTHO05D007361 2.1e-27 127.9 154 44.2
RcHm_v2.0_Chr1g0355831 Rosa chinensis HOM05D005914 ORTHO05D007361 4.7e-27 126.7 252 32.1
Lj7C718G14 Lonicera japonica HOM05D005914 ORTHO05D007361 8.8e-26 122.5 95 56.8
FAN20G2480 Fragaria x ananassa HOM05D005914 ORTHO05D007361 1.1e-25 122.1 389 28.8
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 9.7e-25 119.0 293 31.1
Nitab4.5_0003498g0080 Nicotiana tabacum HOM05D005914 ORTHO05D007361 2.4e-23 114.4 114 46.5
MSTRG.13986 Avicennia marina HOM05D005914 ORTHO05D007361 2.6e-22 110.9 275 31.6
MBI04_g46184_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 5.5e-20 103.2 391 24.6
Hma1.2p1_0000F.1_g000780 Hydrangea macrophylla HOM05D005914 ORTHO05D007361 2.6e-17 94.4 155 36.1
Sc09g0008580 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.8e-16 90.9 80 51.2
Oeu033137.1 Olea europaea HOM05D005914 ORTHO05D007361 4.5e-14 83.6 79 49.4
TPR.G22731 Trifolium pratense HOM05D005914 ORTHO05D007361 4.5e-14 83.6 74 54.1
SEGI_14251 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 1.0e-13 82.4 55 69.1
MD15G1439700 Malus domestica HOM05D005914 ORTHO05D007361 1.7e-13 81.6 120 39.2
Sc09g0008460 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.2e-13 81.3 132 33.3
Glyma.08G177800 Glycine max HOM05D005914 ORTHO05D007361 2.5e-12 77.8 68 52.9
Sc09g0008450 Simmondsia chinensis HOM05D005914 ORTHO05D007361 5.5e-12 76.6 109 36.7
PGR031G2948 Punica granatum HOM05D005914 ORTHO05D007361 7.2e-12 76.3 96 42.7
Sc09g0008440 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.8e-08 64.3 103 35.0


User provided reference genes

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