Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00002813 Prasinoderma coloniale HOM05D003724 ORTHO05D004367 4.8e-289 997.3 554 100.0
Lsat_1_v5_gn_8_147680 Lactuca sativa HOM05D003724 ORTHO05D004367 3.1e-22 110.9 252 32.9
AagrBONN_evm.TU.Sc2ySwM_368.2626 Anthoceros agrestis HOM05D003724 ORTHO05D004367 3.4e-21 107.5 255 33.7
Manes.12G011600 Manihot esculenta HOM05D003724 ORTHO05D004367 4.5e-21 107.1 264 30.7
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 4.5e-21 107.1 252 32.1
BcaB03g15202 Brassica carinata HOM05D003724 ORTHO05D004367 1.3e-20 105.5 268 29.5
CANSAT01G0850 Cannabis sativa HOM05D003724 ORTHO05D004367 1.7e-20 105.1 252 32.1
THA.LOC104825509 Tarenaya hassleriana HOM05D003724 ORTHO05D004367 1.7e-20 105.1 252 30.6
C06p42900 Brassica napus HOM05D003724 ORTHO05D004367 2.9e-20 104.4 256 30.1
BolC6t39148H Brassica oleracea HOM05D003724 ORTHO05D004367 2.9e-20 104.4 256 30.1
Nn3g16465 Nelumbo nucifera HOM05D003724 ORTHO05D004367 2.9e-20 104.4 253 31.2
A07p33960 Brassica napus HOM05D003724 ORTHO05D004367 3.8e-20 104.0 256 30.1
BraA07t31023Z Brassica rapa HOM05D003724 ORTHO05D004367 3.8e-20 104.0 256 30.1
CARHR059910 Cardamine hirsuta HOM05D003724 ORTHO05D004367 3.8e-20 104.0 254 30.7
PGR102G1478 Punica granatum HOM05D003724 ORTHO05D004367 3.8e-20 104.0 252 32.1
Sed0021729 Sechium edule HOM05D003724 ORTHO05D004367 5.0e-20 103.6 266 29.7
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 6.5e-20 103.2 252 31.0
Sp5g22320 Schrenkiella parvula HOM05D003724 ORTHO05D004367 6.5e-20 103.2 254 29.9
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 8.5e-20 102.8 252 30.6
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 1.1e-19 102.4 252 31.3
Thhalv10018311m.g Eutrema salsugineum HOM05D003724 ORTHO05D004367 1.1e-19 102.4 254 29.9
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 1.1e-19 102.4 252 31.0
SMO116G0148 Selaginella moellendorffii HOM05D003724 ORTHO05D004367 1.1e-19 102.4 239 29.7
CBR_g17956 Chara braunii HOM05D003724 ORTHO05D004367 1.4e-19 102.1 254 33.5
Hund06087 Selenicereus undatus HOM05D003724 ORTHO05D004367 1.4e-19 102.1 244 32.0
Actinidia30650 Actinidia chinensis HOM05D003724 ORTHO05D004367 1.9e-19 101.7 252 31.0
CSS0039632 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 1.9e-19 101.7 240 31.2
CiPaw.05G110100 Carya illinoinensis HOM05D003724 ORTHO05D004367 1.9e-19 101.7 252 30.6
Migut.K00732 Erythranthe guttata HOM05D003724 ORTHO05D004367 1.9e-19 101.7 259 30.5
PSO384G3745 Papaver somniferum HOM05D003724 ORTHO05D004367 1.9e-19 101.7 261 29.5
AL2G25920 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 2.5e-19 101.3 254 29.9
BcaC08g46167 Brassica carinata HOM05D003724 ORTHO05D004367 2.5e-19 101.3 256 29.7
CAN.G804.4 Capsicum annuum HOM05D003724 ORTHO05D004367 2.5e-19 101.3 255 30.6
Cpa.g.sc43.54 Carica papaya HOM05D003724 ORTHO05D004367 2.5e-19 101.3 252 31.0
Migut.C00176 Erythranthe guttata HOM05D003724 ORTHO05D004367 2.5e-19 101.3 250 31.2
Lj1g0008936 Lotus japonicus HOM05D003724 ORTHO05D004367 2.5e-19 101.3 250 30.8
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 2.5e-19 101.3 252 31.0
Lalb_Chr01g0009271 Lupinus albus HOM05D003724 ORTHO05D004367 3.2e-19 100.9 252 31.0
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea HOM05D003724 ORTHO05D004367 4.2e-19 100.5 252 31.0
TWI75G0323 Tripterygium wilfordii HOM05D003724 ORTHO05D004367 4.2e-19 100.5 252 31.3
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 4.2e-19 100.5 252 30.6
Glyma.18G006800 Glycine max HOM05D003724 ORTHO05D004367 5.5e-19 100.1 252 30.2
Os09g0506800 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 5.5e-19 100.1 252 29.0
TPR.G28283 Trifolium pratense HOM05D003724 ORTHO05D004367 5.5e-19 100.1 252 31.0
Lj3C1068T3 Lonicera japonica HOM05D003724 ORTHO05D004367 7.2e-19 99.8 250 30.8
PSO478G5007 Papaver somniferum HOM05D003724 ORTHO05D004367 9.4e-19 99.4 261 29.5
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 9.4e-19 99.4 252 31.0
Aa31sc377G30 Aethionema arabicum HOM05D003724 ORTHO05D004367 1.2e-18 99.0 254 29.5
MELO3C010743.2 Cucumis melo HOM05D003724 ORTHO05D004367 1.2e-18 99.0 253 30.8
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 1.2e-18 99.0 250 30.8
Medtr3g085380 Medicago truncatula HOM05D003724 ORTHO05D004367 1.2e-18 99.0 252 31.0
SGA_v2.0_scaffold9G04687 Striga asiatica HOM05D003724 ORTHO05D004367 1.2e-18 99.0 256 29.7
PSO478G4090 Papaver somniferum HOM05D003724 ORTHO05D004367 1.6e-18 98.6 252 30.2
FvH4_4g23800 Fragaria vesca HOM05D003724 ORTHO05D004367 2.1e-18 98.2 253 30.8
FAN22G0779 Fragaria x ananassa HOM05D003724 ORTHO05D004367 2.1e-18 98.2 253 30.8
Lj1g0003468 Lotus japonicus HOM05D003724 ORTHO05D004367 2.1e-18 98.2 252 30.6
PSO339G4917 Papaver somniferum HOM05D003724 ORTHO05D004367 2.1e-18 98.2 261 29.5
Rhsim12G0026000 Rhododendron simsii HOM05D003724 ORTHO05D004367 2.1e-18 98.2 244 32.4
CsaV3_2G025450 Cucumis sativus L. HOM05D003724 ORTHO05D004367 2.7e-18 97.8 253 30.8
PSO782G3500 Papaver somniferum HOM05D003724 ORTHO05D004367 2.7e-18 97.8 261 29.1
PSO782G1352 Papaver somniferum HOM05D003724 ORTHO05D004367 3.6e-18 97.4 265 28.7
vmacro01062 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 3.6e-18 97.4 243 31.7
Oeu036873.1 Olea europaea HOM05D003724 ORTHO05D004367 4.7e-18 97.1 251 30.3
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 6.1e-18 96.7 337 27.6
HanXRQChr08g0207781 Helianthus annuus HOM05D003724 ORTHO05D004367 6.1e-18 96.7 252 31.3
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 7.9e-18 96.3 252 29.8
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 1.0e-17 95.9 252 30.2
Cre10.g452550 Chlamydomonas reinhardtii HOM05D003724 ORTHO05D004367 1.8e-17 95.1 252 29.4
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 1.8e-17 95.1 250 30.8
CDE05G2922 Ceratophyllum demersum HOM05D003724 ORTHO05D004367 2.3e-17 94.7 256 30.9
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 2.3e-17 94.7 264 29.2
Mapoly0003s0194 Marchantia polymorpha HOM05D003724 ORTHO05D004367 2.3e-17 94.7 254 30.7
Solyc04g007330.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 2.3e-17 94.7 250 30.0
Sopen04g002390 Solanum pennellii HOM05D003724 ORTHO05D004367 2.3e-17 94.7 250 30.0
HPP92_003196 Vanilla planifolia HOM05D003724 ORTHO05D004367 2.3e-17 94.7 256 28.9
Lalb_Chr03g0034531 Lupinus albus HOM05D003724 ORTHO05D004367 3.0e-17 94.4 255 29.8
Zm00001eb102420 Zea mays HOM05D003724 ORTHO05D004367 3.0e-17 94.4 252 28.2
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 3.9e-17 94.0 256 30.1
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 3.9e-17 94.0 251 29.9
PSO339G0549 Papaver somniferum HOM05D003724 ORTHO05D004367 3.9e-17 94.0 265 29.4
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 3.9e-17 94.0 231 29.9
AT1G67370 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 1.1e-16 92.4 254 29.1
Aqoxy5G02771 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 2.0e-16 91.7 252 28.2
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 3.3e-16 90.9 252 29.8
AUR62008480 Chenopodium quinoa HOM05D003724 ORTHO05D004367 3.3e-16 90.9 247 28.7
Aqoxy7G01914 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 5.7e-16 90.1 252 27.8
Potri.003G173200 Populus trichocarpa HOM05D003724 ORTHO05D004367 5.7e-16 90.1 252 29.8
Carub.0002s1366 Capsella rubella HOM05D003724 ORTHO05D004367 7.4e-16 89.7 198 32.8
Peaxi162Scf00128g01233 Petunia axillaris HOM05D003724 ORTHO05D004367 9.7e-16 89.4 263 29.3
Cc09_g04930 Coffea canephora HOM05D003724 ORTHO05D004367 1.3e-15 89.0 205 33.2
EL10Ac6g13492 Beta vulgaris HOM05D003724 ORTHO05D004367 2.2e-15 88.2 252 30.2
SalBow2G1610 Salvia bowleyana HOM05D003724 ORTHO05D004367 2.2e-15 88.2 264 28.0
Sc04g0010100 Simmondsia chinensis HOM05D003724 ORTHO05D004367 3.7e-15 87.4 196 33.7
PGSC0003DMG400029108 Solanum tuberosum HOM05D003724 ORTHO05D004367 3.7e-15 87.4 201 32.8
CARHR058050 Cardamine hirsuta HOM05D003724 ORTHO05D004367 6.3e-15 86.7 255 28.6
Psat5g096280 Pisum sativum HOM05D003724 ORTHO05D004367 6.3e-15 86.7 252 29.8
ATR0561G244 Amborella trichopoda HOM05D003724 ORTHO05D004367 1.1e-14 85.9 244 28.3
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.4e-14 85.5 263 28.9
AUR62021613 Chenopodium quinoa HOM05D003724 ORTHO05D004367 4.1e-14 84.0 252 29.8
FAN17G0970 Fragaria x ananassa HOM05D003724 ORTHO05D004367 5.3e-14 83.6 282 27.3
FAN12G2603 Fragaria x ananassa HOM05D003724 ORTHO05D004367 2.0e-13 81.6 206 31.6
Potri.001G055201 Populus trichocarpa HOM05D003724 ORTHO05D004367 3.5e-13 80.9 252 29.8
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 5.9e-13 80.1 252 27.4
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 5.9e-13 80.1 252 29.8
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 6.5e-12 76.6 252 28.6
ClCG08G017130 Citrullus lanatus HOM05D003724 ORTHO05D004367 8.5e-12 76.3 240 29.2
Nitab4.5_0002699g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.1e-11 75.9 187 33.7
MBI06_g46773_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.5e-11 75.5 234 29.9
Ciclev10033677m.g Citrus clementina HOM05D003724 ORTHO05D004367 2.1e-10 71.6 242 28.9
Sabra03G0126700 Salix brachista HOM05D003724 ORTHO05D004367 2.1e-10 71.6 266 27.4
Sed0012468 Sechium edule HOM05D003724 ORTHO05D004367 2.1e-10 71.6 196 32.7
Ah.01g020690 Amaranthus hybridus HOM05D003724 ORTHO05D004367 3.6e-10 70.9 252 27.0
MBI06_g32743_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.0e-09 69.3 218 27.1
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 1.4e-09 68.9 250 28.0
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 2.3e-09 68.2 256 26.6
Nitab4.5_0003884g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 3.0e-09 67.8 234 27.8
AL1G56910 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 7.5e-08 63.2 206 25.7
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea HOM05D003724 ORTHO05D004367 6.3e-07 60.1 251 25.9
MBI06_g20299_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 6.3e-07 60.1 163 31.3
Solyc05g015360.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.1e-06 59.3 94 36.2
SHI17968 Sapria himalayana HOM05D003724 ORTHO05D004367 2.4e-06 58.2 115 37.4
Glyma.11G250400 Glycine max HOM05D003724 ORTHO05D004367 9.1e-06 56.2 90 40.0
GSVIVG01010479001 Vitis vinifera HOM05D003724 ORTHO05D004367 9.1e-06 56.2 156 30.1


User provided reference genes

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