Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401030272 Solanum tuberosum HOM05D003395 ORTHO05D004087 3.9e-66 254.6 125 100.0
PGSC0003DMG400012709 Solanum tuberosum HOM05D003395 ORTHO05D004087 2.6e-65 251.9 124 98.4
Sopen04g008350 Solanum pennellii HOM05D003395 ORTHO05D004087 3.7e-64 248.1 124 95.2
Solyc04g016240.3 Solanum lycopersicum HOM05D003395 ORTHO05D004087 8.2e-64 246.9 124 96.0
CAN.G676.13 Capsicum annuum HOM05D003395 ORTHO05D004087 1.4e-63 246.1 124 94.4
Nitab4.5_0006870g0040 Nicotiana tabacum HOM05D003395 ORTHO05D004087 7.7e-62 240.4 124 91.9
Nitab4.5_0000826g0280 Nicotiana tabacum HOM05D003395 ORTHO05D004087 4.2e-60 234.6 124 89.5
Peaxi162Scf00130g00723 Petunia axillaris HOM05D003395 ORTHO05D004087 4.2e-60 234.6 123 91.1
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 1.5e-57 226.1 124 87.1
Haze_07832 Corylus avellana HOM05D003395 ORTHO05D004087 2.6e-57 225.3 124 85.5
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 3.3e-57 224.9 124 87.1
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 3.3e-57 224.9 124 84.7
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 5.7e-57 224.2 124 85.5
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 5.7e-57 224.2 124 85.5
QL07p003024 Quercus lobata HOM05D003395 ORTHO05D004087 5.7e-57 224.2 124 84.7
Haze_09905 Corylus avellana HOM05D003395 ORTHO05D004087 7.4e-57 223.8 124 84.7
Lj1A1126G58 Lonicera japonica HOM05D003395 ORTHO05D004087 1.3e-56 223.0 124 85.5
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.7e-56 222.6 124 84.7
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 1.7e-56 222.6 124 84.7
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 2.2e-56 222.2 123 84.6
Hma1.2p1_0556F.1_g178050 Hydrangea macrophylla HOM05D003395 ORTHO05D004087 2.8e-56 221.9 123 84.6
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 3.7e-56 221.5 124 84.7
Lj1A1128G63 Lonicera japonica HOM05D003395 ORTHO05D004087 8.2e-56 220.3 124 84.7
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 8.2e-56 220.3 124 82.3
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 2.4e-55 218.8 124 81.5
Manes.11G065000 Manihot esculenta HOM05D003395 ORTHO05D004087 2.4e-55 218.8 124 80.6
MBI13_g36804_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 3.1e-55 218.4 124 79.0
MBI13_g36815_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 3.1e-55 218.4 124 79.0
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 4.1e-55 218.0 124 83.1
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 7.0e-55 217.2 124 83.1
Prupe.7G054800 Prunus persica HOM05D003395 ORTHO05D004087 7.0e-55 217.2 124 83.1
CSS0000776 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 1.2e-54 216.5 124 83.1
Eucgr.K01721 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.2e-54 216.5 124 82.3
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 1.6e-54 216.1 124 79.8
Atru.chr1.1149 Acer truncatum HOM05D003395 ORTHO05D004087 2.0e-54 215.7 124 83.1
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 2.6e-54 215.3 124 82.3
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 2.6e-54 215.3 124 81.5
MELO3C009808.2 Cucumis melo HOM05D003395 ORTHO05D004087 3.5e-54 214.9 124 81.5
Nn7g36372 Nelumbo nucifera HOM05D003395 ORTHO05D004087 3.5e-54 214.9 124 79.0
ClCG10G015680 Citrullus lanatus HOM05D003395 ORTHO05D004087 4.5e-54 214.5 124 80.6
CsaV3_3G040740 Cucumis sativus L. HOM05D003395 ORTHO05D004087 4.5e-54 214.5 124 80.6
Eucgr.K01999 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.0e-53 213.4 124 81.5
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 1.3e-53 213.0 124 79.8
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 1.7e-53 212.6 124 81.5
Gohir.D11G326700 Gossypium hirsutum HOM05D003395 ORTHO05D004087 1.7e-53 212.6 124 80.6
Gorai.007G357300 Gossypium raimondii HOM05D003395 ORTHO05D004087 1.7e-53 212.6 124 80.6
PSO210G1603 Papaver somniferum HOM05D003395 ORTHO05D004087 1.7e-53 212.6 124 79.8
Rhsim04G0105700 Rhododendron simsii HOM05D003395 ORTHO05D004087 2.2e-53 212.2 124 82.3
ECA236G0559 Erigeron canadensis HOM05D003395 ORTHO05D004087 2.9e-53 211.8 124 81.5
PSO210G2967 Papaver somniferum HOM05D003395 ORTHO05D004087 2.9e-53 211.8 124 79.0
EL10Ac3g07130 Beta vulgaris HOM05D003395 ORTHO05D004087 3.8e-53 211.5 124 79.8
Gohir.A11G309900 Gossypium hirsutum HOM05D003395 ORTHO05D004087 6.5e-53 210.7 124 79.8
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 8.5e-53 210.3 124 79.0
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 8.5e-53 210.3 124 79.0
Cc06_g17870 Coffea canephora HOM05D003395 ORTHO05D004087 8.5e-53 210.3 124 79.0
Sed0021456 Sechium edule HOM05D003395 ORTHO05D004087 8.5e-53 210.3 124 78.2
COL.COLO4_22300 Corchorus olitorius HOM05D003395 ORTHO05D004087 1.1e-52 209.9 124 78.2
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 1.1e-52 209.9 124 81.5
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 1.1e-52 209.9 124 78.2
DCAR_020506 Daucus carota HOM05D003395 ORTHO05D004087 1.5e-52 209.5 124 79.0
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 1.5e-52 209.5 124 80.6
TAR633G2151 Trochodendron aralioides HOM05D003395 ORTHO05D004087 1.5e-52 209.5 124 79.8
vmacro09059 Vaccinium macrocarpon HOM05D003395 ORTHO05D004087 1.5e-52 209.5 123 81.3
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 2.5e-52 208.8 124 77.4
Cpa.g.sc182.8 Carica papaya HOM05D003395 ORTHO05D004087 2.5e-52 208.8 124 79.0
Sabra12G0023800 Salix brachista HOM05D003395 ORTHO05D004087 4.2e-52 208.0 124 77.4
HanXRQChr04g0125091 Helianthus annuus HOM05D003395 ORTHO05D004087 9.4e-52 206.8 124 80.6
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 9.4e-52 206.8 124 79.8
Potri.015G026200 Populus trichocarpa HOM05D003395 ORTHO05D004087 9.4e-52 206.8 124 78.2
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 1.2e-51 206.5 123 80.5
HPP92_001326 Vanilla planifolia HOM05D003395 ORTHO05D004087 1.2e-51 206.5 124 76.6
Sabra15G0019300 Salix brachista HOM05D003395 ORTHO05D004087 1.6e-51 206.1 124 76.6
Sabra15G0021800 Salix brachista HOM05D003395 ORTHO05D004087 1.6e-51 206.1 124 76.6
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 2.1e-51 205.7 124 79.8
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 2.1e-51 205.7 123 81.3
Lsat_1_v5_gn_8_82001 Lactuca sativa HOM05D003395 ORTHO05D004087 2.7e-51 205.3 124 76.6
MSTRG.26130 Avicennia marina HOM05D003395 ORTHO05D004087 3.6e-51 204.9 124 76.6
AUR62026086 Chenopodium quinoa HOM05D003395 ORTHO05D004087 4.7e-51 204.5 124 75.8
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 4.7e-51 204.5 124 79.8
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 6.1e-51 204.1 124 78.2
Oeu008171.1 Olea europaea HOM05D003395 ORTHO05D004087 2.3e-50 202.2 124 76.6
ATR0320G031 Amborella trichopoda HOM05D003395 ORTHO05D004087 3.0e-50 201.8 124 76.6
Ah.13g076590 Amaranthus hybridus HOM05D003395 ORTHO05D004087 6.7e-50 200.7 123 74.8
THA.LOC104817509 Tarenaya hassleriana HOM05D003395 ORTHO05D004087 1.2e-49 199.9 124 75.0
SalBow6G3234 Salvia bowleyana HOM05D003395 ORTHO05D004087 2.6e-49 198.7 124 75.0
SGA_v2.0_scaffold94G28494 Striga asiatica HOM05D003395 ORTHO05D004087 2.6e-49 198.7 126 75.4
AL5G38890 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 3.3e-49 198.4 124 73.4
Sc19g0006620 Simmondsia chinensis HOM05D003395 ORTHO05D004087 3.3e-49 198.4 124 79.0
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 4.4e-49 198.0 123 77.2
CDE11G0192 Ceratophyllum demersum HOM05D003395 ORTHO05D004087 5.7e-49 197.6 124 75.8
Migut.K00101 Erythranthe guttata HOM05D003395 ORTHO05D004087 7.5e-49 197.2 124 72.6
Carub.0005s2420 Capsella rubella HOM05D003395 ORTHO05D004087 2.2e-48 195.7 124 73.4
BcaC07g40053 Brassica carinata HOM05D003395 ORTHO05D004087 2.8e-48 195.3 124 71.8
C08p32740 Brassica napus HOM05D003395 ORTHO05D004087 2.8e-48 195.3 124 71.8
BolC8t50885H Brassica oleracea HOM05D003395 ORTHO05D004087 2.8e-48 195.3 124 71.8
Os03g0349000 Oryza sativa ssp. japonica HOM05D003395 ORTHO05D004087 8.2e-48 193.7 124 72.6
Sp5g05250 Schrenkiella parvula HOM05D003395 ORTHO05D004087 1.8e-47 192.6 124 71.8
A09p50250 Brassica napus HOM05D003395 ORTHO05D004087 2.4e-47 192.2 124 71.8
BraA09t40475Z Brassica rapa HOM05D003395 ORTHO05D004087 2.4e-47 192.2 124 71.8
Zm00001eb016760 Zea mays HOM05D003395 ORTHO05D004087 3.1e-47 191.8 124 71.8
BcaC02g07302 Brassica carinata HOM05D003395 ORTHO05D004087 4.1e-47 191.4 124 72.6
A04p31720 Brassica napus HOM05D003395 ORTHO05D004087 4.1e-47 191.4 124 72.6
BolC4t28411H Brassica oleracea HOM05D003395 ORTHO05D004087 4.1e-47 191.4 124 72.6
BraA04t18629Z Brassica rapa HOM05D003395 ORTHO05D004087 4.1e-47 191.4 124 72.6
Lalb_Chr24g0395581 Lupinus albus HOM05D003395 ORTHO05D004087 4.1e-47 191.4 124 74.2
C04p69140 Brassica napus HOM05D003395 ORTHO05D004087 9.1e-47 190.3 124 72.6
Aa31LG1G23630 Aethionema arabicum HOM05D003395 ORTHO05D004087 1.2e-46 189.9 124 71.0
Lsat_1_v5_gn_4_163840 Lactuca sativa HOM05D003395 ORTHO05D004087 1.2e-46 189.9 123 72.4
Sp4g23860 Schrenkiella parvula HOM05D003395 ORTHO05D004087 2.0e-46 189.1 124 71.0
AT3G57350 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 4.5e-46 188.0 123 71.5
Thhalv10016231m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 4.5e-46 188.0 124 69.4
Carub.0004s2387 Capsella rubella HOM05D003395 ORTHO05D004087 5.9e-46 187.6 124 69.4
BcaB06g29192 Brassica carinata HOM05D003395 ORTHO05D004087 7.7e-46 187.2 124 71.0
AL4G39710 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 1.0e-45 186.8 124 69.4
AT2G41620 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 1.0e-45 186.8 124 69.4
Thhalv10005836m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 1.3e-45 186.4 124 71.0
Lalb_Chr14g0373701 Lupinus albus HOM05D003395 ORTHO05D004087 2.2e-45 185.7 124 72.6
CARHR136710 Cardamine hirsuta HOM05D003395 ORTHO05D004087 3.8e-45 184.9 124 69.4
Lsat_1_v5_gn_4_147041 Lactuca sativa HOM05D003395 ORTHO05D004087 3.8e-45 184.9 123 70.7
SEGI_19146 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 1.8e-42 176.0 123 67.5
SEGI_38355 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 4.0e-42 174.9 122 68.0
AUR62024500 Chenopodium quinoa HOM05D003395 ORTHO05D004087 8.8e-42 173.7 123 69.1
AagrBONN_evm.TU.Sc2ySwM_117.1001 Anthoceros agrestis HOM05D003395 ORTHO05D004087 4.4e-41 171.4 123 66.7
Eucgr.K02008 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.1e-39 166.8 90 86.7
CAN.G624.32 Capsicum annuum HOM05D003395 ORTHO05D004087 5.4e-39 164.5 223 45.7
SMO203G0013 Selaginella moellendorffii HOM05D003395 ORTHO05D004087 3.5e-38 161.8 107 68.2
Pp3c6_19740 Physcomitrium patens HOM05D003395 ORTHO05D004087 2.3e-37 159.1 124 61.3
Mapoly0069s0022 Marchantia polymorpha HOM05D003395 ORTHO05D004087 1.1e-36 156.8 123 60.2
CAN.G4526.1 Capsicum annuum HOM05D003395 ORTHO05D004087 2.6e-33 145.6 77 90.9
RcHm_v2.0_Chr2g0152381 Rosa chinensis HOM05D003395 ORTHO05D004087 3.5e-30 135.2 129 55.0
CBR_g4043 Chara braunii HOM05D003395 ORTHO05D004087 7.3e-28 127.5 142 46.5
FAN09G3727 Fragaria x ananassa HOM05D003395 ORTHO05D004087 7.3e-28 127.5 127 52.8
FvH4_6g38800 Fragaria vesca HOM05D003395 ORTHO05D004087 7.0e-23 110.9 79 62.0
SalBow1G6094 Salvia bowleyana HOM05D003395 ORTHO05D004087 6.0e-22 107.8 124 49.2
unitig_22.g5792 Utricularia gibba HOM05D003395 ORTHO05D004087 7.3e-20 100.9 124 46.8
CARHR167550 Cardamine hirsuta HOM05D003395 ORTHO05D004087 1.6e-19 99.8 77 62.3
Lsat_1_v5_gn_1_62780 Lactuca sativa HOM05D003395 ORTHO05D004087 3.1e-18 95.5 95 53.7
Actinidia17662 Actinidia chinensis HOM05D003395 ORTHO05D004087 2.2e-16 89.4 47 89.4
PRCOL_00003855 Prasinoderma coloniale HOM05D003395 ORTHO05D004087 9.9e-09 63.9 114 34.2
SHI10456 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-07 60.5 29 82.8
Eucgr.K01765 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.9e-07 59.7 31 80.6


User provided reference genes

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