Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401029558 Solanum tuberosum HOM05D002718 ORTHO05D003269 1.3e-41 172.6 85 100.0
CAN.G480.17 Capsicum annuum HOM05D002718 ORTHO05D003269 2.5e-40 168.3 85 97.6
Solyc08g069231.1 Solanum lycopersicum HOM05D002718 ORTHO05D003269 4.3e-40 167.5 85 96.5
Sopen08g022860 Solanum pennellii HOM05D002718 ORTHO05D003269 4.3e-40 167.5 85 96.5
Nitab4.5_0000970g0160 Nicotiana tabacum HOM05D002718 ORTHO05D003269 5.6e-40 167.2 85 96.5
Peaxi162Scf00213g00943 Petunia axillaris HOM05D002718 ORTHO05D003269 1.6e-39 165.6 85 95.3
Nitab4.5_0001942g0140 Nicotiana tabacum HOM05D002718 ORTHO05D003269 2.1e-39 165.2 85 95.3
CANSAT35G0611 Cannabis sativa HOM05D002718 ORTHO05D003269 3.0e-33 144.8 85 81.2
ECA246G1707 Erigeron canadensis HOM05D002718 ORTHO05D003269 1.1e-32 142.9 85 80.0
Dinv37495 Davidia involucrata HOM05D002718 ORTHO05D003269 1.5e-32 142.5 83 79.5
Oeu059291.2 Olea europaea HOM05D002718 ORTHO05D003269 1.5e-32 142.5 85 82.4
CANSAT25G2302 Cannabis sativa HOM05D002718 ORTHO05D003269 1.9e-32 142.1 85 78.8
Dinv38809 Davidia involucrata HOM05D002718 ORTHO05D003269 3.3e-32 141.4 85 80.0
Nn5g27632 Nelumbo nucifera HOM05D002718 ORTHO05D003269 4.3e-32 141.0 81 84.0
Prupe.1G456000 Prunus persica HOM05D002718 ORTHO05D003269 5.6e-32 140.6 78 84.6
GSVIVG01035565001 Vitis vinifera HOM05D002718 ORTHO05D003269 5.6e-32 140.6 84 78.6
MSTRG.11818 Avicennia marina HOM05D002718 ORTHO05D003269 9.6e-32 139.8 85 78.8
Cc11_g03230 Coffea canephora HOM05D002718 ORTHO05D003269 9.6e-32 139.8 85 77.6
TAR383G0086 Trochodendron aralioides HOM05D002718 ORTHO05D003269 1.3e-31 139.4 81 81.5
Rhsim04G0184400 Rhododendron simsii HOM05D002718 ORTHO05D003269 1.6e-31 139.0 85 77.6
COL.COLO4_18626 Corchorus olitorius HOM05D002718 ORTHO05D003269 2.1e-31 138.7 86 77.9
SGA_v2.0_scaffold27G11655 Striga asiatica HOM05D002718 ORTHO05D003269 2.8e-31 138.3 84 79.8
Migut.A00453 Erythranthe guttata HOM05D002718 ORTHO05D003269 3.7e-31 137.9 79 81.0
vmacro08496 Vaccinium macrocarpon HOM05D002718 ORTHO05D003269 3.7e-31 137.9 85 77.6
CSS0012006 Camellia sinensis var. sinensis HOM05D002718 ORTHO05D003269 6.2e-31 137.1 82 78.0
QL12p025880 Quercus lobata HOM05D002718 ORTHO05D003269 6.2e-31 137.1 84 81.0
Psat0s2005g0040 Pisum sativum HOM05D002718 ORTHO05D003269 8.1e-31 136.7 83 80.7
Psat6g034400 Pisum sativum HOM05D002718 ORTHO05D003269 8.1e-31 136.7 83 80.7
Carub.0007s2548 Capsella rubella HOM05D002718 ORTHO05D003269 1.1e-30 136.3 78 84.6
Lsat_1_v5_gn_3_26460 Lactuca sativa HOM05D002718 ORTHO05D003269 1.4e-30 136.0 87 77.0
TPR.G12004 Trifolium pratense HOM05D002718 ORTHO05D003269 1.4e-30 136.0 83 77.1
Duzib168G0110 Durio zibethinus HOM05D002718 ORTHO05D003269 1.8e-30 135.6 82 76.8
BcaNung00226 Brassica carinata HOM05D002718 ORTHO05D003269 2.4e-30 135.2 78 83.3
CiPaw.08G021400 Carya illinoinensis HOM05D002718 ORTHO05D003269 2.4e-30 135.2 80 80.0
Thhalv10024313m.g Eutrema salsugineum HOM05D002718 ORTHO05D003269 2.4e-30 135.2 78 83.3
Glyma.14G138300 Glycine max HOM05D002718 ORTHO05D003269 2.4e-30 135.2 83 77.1
Actinidia25741 Actinidia chinensis HOM05D002718 ORTHO05D003269 3.1e-30 134.8 82 75.6
PSO675G7617 Papaver somniferum HOM05D002718 ORTHO05D003269 3.1e-30 134.8 83 74.7
Thecc.09G002800 Theobroma cacao HOM05D002718 ORTHO05D003269 3.1e-30 134.8 84 76.2
Ca_12844_v3 Cicer arietinum L. HOM05D002718 ORTHO05D003269 5.3e-30 134.0 83 79.5
HanXRQChr17g0539291 Helianthus annuus HOM05D002718 ORTHO05D003269 5.3e-30 134.0 85 76.5
Sp7g14590 Schrenkiella parvula HOM05D002718 ORTHO05D003269 5.3e-30 134.0 78 83.3
AT4G16130 Arabidopsis thaliana HOM05D002718 ORTHO05D003269 6.9e-30 133.7 78 82.1
Glyma.17G194400 Glycine max HOM05D002718 ORTHO05D003269 6.9e-30 133.7 83 75.9
Lj5g0024079 Lotus japonicus HOM05D002718 ORTHO05D003269 6.9e-30 133.7 84 77.4
Nn8g41097 Nelumbo nucifera HOM05D002718 ORTHO05D003269 6.9e-30 133.7 77 84.4
PSO170G4524 Papaver somniferum HOM05D002718 ORTHO05D003269 6.9e-30 133.7 83 78.3
CARHR222420 Cardamine hirsuta HOM05D002718 ORTHO05D003269 9.0e-30 133.3 78 84.6
Haze_21795 Corylus avellana HOM05D002718 ORTHO05D003269 9.0e-30 133.3 82 79.3
MD15G1103100 Malus domestica HOM05D002718 ORTHO05D003269 9.0e-30 133.3 78 79.5
PGR084G0004 Punica granatum HOM05D002718 ORTHO05D003269 9.0e-30 133.3 82 75.6
PGR142G1783 Punica granatum HOM05D002718 ORTHO05D003269 9.0e-30 133.3 82 75.6
MSTRG.25768 Avicennia marina HOM05D002718 ORTHO05D003269 1.2e-29 132.9 78 80.8
BcaC09g50300 Brassica carinata HOM05D002718 ORTHO05D003269 1.2e-29 132.9 78 82.1
C01p26840 Brassica napus HOM05D002718 ORTHO05D003269 1.2e-29 132.9 78 82.1
BolC1t02628H Brassica oleracea HOM05D002718 ORTHO05D003269 1.2e-29 132.9 78 82.1
Ciclev10007339m.g Citrus clementina HOM05D002718 ORTHO05D003269 1.2e-29 132.9 79 77.2
TWI32G0829 Tripterygium wilfordii HOM05D002718 ORTHO05D003269 1.2e-29 132.9 78 83.3
VMungo0647G1266 Vigna mungo HOM05D002718 ORTHO05D003269 1.2e-29 132.9 83 77.1
AL7G39040 Arabidopsis lyrata HOM05D002718 ORTHO05D003269 1.5e-29 132.5 78 82.1
A01p21500 Brassica napus HOM05D002718 ORTHO05D003269 1.5e-29 132.5 78 80.8
BraA01t02056Z Brassica rapa HOM05D002718 ORTHO05D003269 1.5e-29 132.5 78 80.8
Cfa013311 Carpinus fangiana HOM05D002718 ORTHO05D003269 1.5e-29 132.5 82 78.0
ClCG10G008570 Citrullus lanatus HOM05D002718 ORTHO05D003269 1.5e-29 132.5 78 80.8
MD08G1124400 Malus domestica HOM05D002718 ORTHO05D003269 1.5e-29 132.5 78 79.5
CsaV3_4G009070 Cucumis sativus L. HOM05D002718 ORTHO05D003269 2.0e-29 132.1 78 82.1
Gohir.A06G107500 Gossypium hirsutum HOM05D002718 ORTHO05D003269 2.0e-29 132.1 82 75.6
Gohir.D06G109800 Gossypium hirsutum HOM05D002718 ORTHO05D003269 2.0e-29 132.1 82 75.6
Gorai.010G124600 Gossypium raimondii HOM05D002718 ORTHO05D003269 2.0e-29 132.1 82 75.6
Potri.018G145700 Populus trichocarpa HOM05D002718 ORTHO05D003269 2.0e-29 132.1 79 81.0
THA.LOC104820278 Tarenaya hassleriana HOM05D002718 ORTHO05D003269 2.0e-29 132.1 78 83.3
MELO3C018969.2 Cucumis melo HOM05D002718 ORTHO05D003269 2.6e-29 131.7 78 80.8
Manes.16G137600 Manihot esculenta HOM05D002718 ORTHO05D003269 2.6e-29 131.7 77 81.8
GSVIVG01032250001 Vitis vinifera HOM05D002718 ORTHO05D003269 2.6e-29 131.7 80 76.2
DCAR_000671 Daucus carota HOM05D002718 ORTHO05D003269 3.4e-29 131.3 84 71.4
Lj3C988G10 Lonicera japonica HOM05D002718 ORTHO05D003269 3.4e-29 131.3 84 76.2
Medtr1g009190 Medicago truncatula HOM05D002718 ORTHO05D003269 3.4e-29 131.3 83 75.9
Phvul.001G077700 Phaseolus vulgaris HOM05D002718 ORTHO05D003269 3.4e-29 131.3 83 74.7
SalBow4G0158 Salvia bowleyana HOM05D002718 ORTHO05D003269 4.5e-29 131.0 77 76.6
Sed0009215 Sechium edule HOM05D002718 ORTHO05D003269 4.5e-29 131.0 78 79.5
Cpa.g.sc148.1 Carica papaya HOM05D002718 ORTHO05D003269 5.8e-29 130.6 78 76.9
Cc00_g00350 Coffea canephora HOM05D002718 ORTHO05D003269 5.8e-29 130.6 79 78.5
FvH4_2g36460 Fragaria vesca HOM05D002718 ORTHO05D003269 5.8e-29 130.6 78 78.2
FAN20G1933 Fragaria x ananassa HOM05D002718 ORTHO05D003269 5.8e-29 130.6 78 78.2
Potri.018G003100 Populus trichocarpa HOM05D002718 ORTHO05D003269 5.8e-29 130.6 77 79.2
EL10Ac2g03697 Beta vulgaris HOM05D002718 ORTHO05D003269 7.6e-29 130.2 78 79.5
Hma1.2p1_0284F.1_g113850 Hydrangea macrophylla HOM05D002718 ORTHO05D003269 7.6e-29 130.2 78 82.1
Sabra18G0127600 Salix brachista HOM05D002718 ORTHO05D003269 7.6e-29 130.2 79 79.7
Aqoxy4G00376 Aquilegia oxysepala HOM05D002718 ORTHO05D003269 9.9e-29 129.8 85 72.9
Lj7C754T6 Lonicera japonica HOM05D002718 ORTHO05D003269 9.9e-29 129.8 78 76.9
RcHm_v2.0_Chr6g0305421 Rosa chinensis HOM05D002718 ORTHO05D003269 9.9e-29 129.8 79 77.2
Aa31LG10G6050 Aethionema arabicum HOM05D002718 ORTHO05D003269 1.3e-28 129.4 81 76.5
Carub.0005s0889 Capsella rubella HOM05D002718 ORTHO05D003269 1.3e-28 129.4 81 72.8
QL12p025856 Quercus lobata HOM05D002718 ORTHO05D003269 1.7e-28 129.0 84 76.2
Sabra18G0002900 Salix brachista HOM05D002718 ORTHO05D003269 2.2e-28 128.6 77 77.9
Sabra18G0006300 Salix brachista HOM05D002718 ORTHO05D003269 2.2e-28 128.6 77 77.9
Sabra18G0006600 Salix brachista HOM05D002718 ORTHO05D003269 2.2e-28 128.6 77 77.9
Sabra18G0009800 Salix brachista HOM05D002718 ORTHO05D003269 2.2e-28 128.6 77 77.9
FAN27G0986 Fragaria x ananassa HOM05D002718 ORTHO05D003269 2.9e-28 128.3 78 76.9
THA.LOC104810997 Tarenaya hassleriana HOM05D002718 ORTHO05D003269 2.9e-28 128.3 77 76.6
Os02g0141300 Oryza sativa ssp. japonica HOM05D002718 ORTHO05D003269 3.8e-28 127.9 79 75.9
CiPaw.07G209700 Carya illinoinensis HOM05D002718 ORTHO05D003269 4.9e-28 127.5 82 75.6
PSO675G1851 Papaver somniferum HOM05D002718 ORTHO05D003269 4.9e-28 127.5 83 73.5
PGR142G2777 Punica granatum HOM05D002718 ORTHO05D003269 6.4e-28 127.1 80 75.0
BcaB08g35974 Brassica carinata HOM05D002718 ORTHO05D003269 8.4e-28 126.7 81 74.1
BcaC04g20159 Brassica carinata HOM05D002718 ORTHO05D003269 8.4e-28 126.7 81 74.1
Manes.03G001300 Manihot esculenta HOM05D002718 ORTHO05D003269 8.4e-28 126.7 77 79.2
Cpa.g.sc115.31 Carica papaya HOM05D002718 ORTHO05D003269 1.1e-27 126.3 77 76.6
Eucgr.C02132 Eucalyptus grandis HOM05D002718 ORTHO05D003269 1.1e-27 126.3 83 73.5
MBI16_g37213_MAGBIO Magnolia biondii HOM05D002718 ORTHO05D003269 1.1e-27 126.3 78 73.1
AUR62020642 Chenopodium quinoa HOM05D002718 ORTHO05D003269 1.4e-27 125.9 78 75.6
Sabra18G0120000 Salix brachista HOM05D002718 ORTHO05D003269 1.4e-27 125.9 79 77.2
AUR62038736 Chenopodium quinoa HOM05D002718 ORTHO05D003269 1.9e-27 125.6 82 73.2
Lalb_Chr22g0361171 Lupinus albus HOM05D002718 ORTHO05D003269 1.9e-27 125.6 78 78.2
Nitab4.5_0001535g0040 Nicotiana tabacum HOM05D002718 ORTHO05D003269 1.9e-27 125.6 79 73.4
Hund03264 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.9e-27 125.6 85 70.6
THA.LOC104802597 Tarenaya hassleriana HOM05D002718 ORTHO05D003269 2.4e-27 125.2 78 79.5
Atru.chr7.2686 Acer truncatum HOM05D002718 ORTHO05D003269 4.2e-27 124.4 85 70.6
MSTRG.10465 Avicennia marina HOM05D002718 ORTHO05D003269 5.5e-27 124.0 81 71.6
ATR0626G149 Amborella trichopoda HOM05D002718 ORTHO05D003269 7.1e-27 123.6 78 74.4
CsaV3_3G047280 Cucumis sativus L. HOM05D002718 ORTHO05D003269 7.1e-27 123.6 84 67.9
Thhalv10012582m.g Eutrema salsugineum HOM05D002718 ORTHO05D003269 7.1e-27 123.6 81 71.6
Zm00001eb227090 Zea mays HOM05D002718 ORTHO05D003269 7.1e-27 123.6 80 71.2
arahy.Tifrunner.gnm1.ann1.NA6C8E Arachis hypogaea HOM05D002718 ORTHO05D003269 9.3e-27 123.2 78 75.6
arahy.Tifrunner.gnm1.ann1.YWBJ1A Arachis hypogaea HOM05D002718 ORTHO05D003269 9.3e-27 123.2 78 75.6
CAN.G600.5 Capsicum annuum HOM05D002718 ORTHO05D003269 1.2e-26 122.9 78 73.1
Os06g0702500 Oryza sativa ssp. japonica HOM05D002718 ORTHO05D003269 1.2e-26 122.9 78 74.4
SEGI_21242 Sequoiadendron giganteum HOM05D002718 ORTHO05D003269 1.2e-26 122.9 80 73.8
BcaB04g18359 Brassica carinata HOM05D002718 ORTHO05D003269 1.6e-26 122.5 78 76.9
BolC9t57573H Brassica oleracea HOM05D002718 ORTHO05D003269 2.1e-26 122.1 82 73.2
BraA10t43426Z Brassica rapa HOM05D002718 ORTHO05D003269 2.1e-26 122.1 82 73.2
Sp6g17930 Schrenkiella parvula HOM05D002718 ORTHO05D003269 2.1e-26 122.1 81 70.4
Peaxi162Scf00320g00216 Petunia axillaris HOM05D002718 ORTHO05D003269 2.7e-26 121.7 79 73.4
SEGI_37495 Sequoiadendron giganteum HOM05D002718 ORTHO05D003269 2.7e-26 121.7 79 73.4
DCAR_004565 Daucus carota HOM05D002718 ORTHO05D003269 4.6e-26 120.9 98 62.2
Lalb_Chr08g0243461 Lupinus albus HOM05D002718 ORTHO05D003269 4.6e-26 120.9 85 70.6
HPP92_017382 Vanilla planifolia HOM05D002718 ORTHO05D003269 4.6e-26 120.9 82 67.1
ClCG05G026320 Citrullus lanatus HOM05D002718 ORTHO05D003269 6.0e-26 120.6 77 70.1
PGSC0003DMG400009774 Solanum tuberosum HOM05D002718 ORTHO05D003269 6.0e-26 120.6 75 74.7
AT3G42850 Arabidopsis thaliana HOM05D002718 ORTHO05D003269 7.9e-26 120.2 75 73.3
AL5G21150 Arabidopsis lyrata HOM05D002718 ORTHO05D003269 1.3e-25 119.4 75 73.3
MELO3C003601.2 Cucumis melo HOM05D002718 ORTHO05D003269 2.3e-25 118.6 79 68.4
Nitab4.5_0000899g0120 Nicotiana tabacum HOM05D002718 ORTHO05D003269 2.3e-25 118.6 83 68.7
C08p28790 Brassica napus HOM05D002718 ORTHO05D003269 3.0e-25 118.2 81 71.6
Sopen00g003670 Solanum pennellii HOM05D002718 ORTHO05D003269 3.0e-25 118.2 78 70.5
Sopen07g005900 Solanum pennellii HOM05D002718 ORTHO05D003269 3.0e-25 118.2 78 70.5
Oeu028830.2 Olea europaea HOM05D002718 ORTHO05D003269 5.1e-25 117.5 88 68.2
Sc06g0001240 Simmondsia chinensis HOM05D002718 ORTHO05D003269 5.1e-25 117.5 80 75.0
SHI02366 Sapria himalayana HOM05D002718 ORTHO05D003269 6.7e-25 117.1 80 67.5
Solyc07g016170.4 Solanum lycopersicum HOM05D002718 ORTHO05D003269 6.7e-25 117.1 75 72.0
CDE07G1244 Ceratophyllum demersum HOM05D002718 ORTHO05D003027 1.9e-24 115.5 68 75.0
A10p13290 Brassica napus HOM05D002718 ORTHO05D003269 2.8e-23 111.7 70 77.1
C09p47190 Brassica napus HOM05D002718 ORTHO05D003269 8.2e-23 110.2 69 76.8
unitig_748.g8176 Utricularia gibba HOM05D002718 ORTHO05D003269 1.1e-22 109.8 81 66.7
SalBow5G2825 Salvia bowleyana HOM05D002718 ORTHO05D003269 5.3e-22 107.5 79 64.6
SalBow5G3535 Salvia bowleyana HOM05D002718 ORTHO05D003269 5.3e-22 107.5 79 64.6
C01p28220 Brassica napus HOM05D002718 ORTHO05D003269 1.5e-21 105.9 81 66.7
Lsat_1_v5_gn_5_56521 Lactuca sativa HOM05D002718 ORTHO05D003269 2.0e-21 105.5 83 59.0
Pp3c6_8620 Physcomitrium patens HOM05D002718 ORTHO05D003269 5.8e-21 104.0 80 60.0
CARHR153810 Cardamine hirsuta HOM05D002718 ORTHO05D003269 6.5e-20 100.5 65 73.8
Pp3c16_4920 Physcomitrium patens HOM05D002718 ORTHO05D003269 9.3e-19 96.7 73 61.6
SMO146G0086 Selaginella moellendorffii HOM05D002718 ORTHO05D003269 1.2e-18 96.3 80 55.0
AagrBONN_evm.TU.Sc2ySwM_117.407 Anthoceros agrestis HOM05D002718 ORTHO05D003269 1.6e-18 95.9 67 62.7
Potri.018G138202 Populus trichocarpa HOM05D002718 ORTHO05D003269 1.0e-17 93.2 57 80.7
unitig_32.g11648 Utricularia gibba HOM05D002718 ORTHO05D003269 1.8e-17 92.4 57 75.4
CBR_g29486 Chara braunii HOM05D002718 ORTHO05D003269 2.3e-17 92.0 76 53.9
Mapoly0043s0024 Marchantia polymorpha HOM05D002718 ORTHO05D003269 2.3e-17 92.0 67 61.2
PRCOL_00002758 Prasinoderma coloniale HOM05D002718 ORTHO05D003269 1.5e-13 79.3 72 52.8
Ah.10g033820 Amaranthus hybridus HOM05D002718 ORTHO05D003269 5.5e-11 70.9 44 79.5
arahy.Tifrunner.gnm1.ann1.UGM12E Arachis hypogaea HOM05D003313 ORTHO05D004217 1.9e-08 62.4 44 72.7
Cre03.g185300 Chlamydomonas reinhardtii HOM05D002718 ORTHO05D003269 5.7e-08 60.8 77 41.6
PSO675G2070 Papaver somniferum HOM05D002718 ORTHO05D021965 2.2e-07 58.9 36 75.0
MCO10G390 Micromonas commoda HOM05D002718 ORTHO05D003269 6.9e-06 53.9 62 43.5


User provided reference genes

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