Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401018643 Solanum tuberosum HOM05D001734 ORTHO05D006943 2.7e-39 164.9 81 100.0
Sopen01g053910 Solanum pennellii HOM05D001734 ORTHO05D006943 4.7e-36 154.1 78 97.4
Solyc01g111870.3 Solanum lycopersicum HOM05D001734 ORTHO05D006943 1.0e-35 152.9 78 96.2
CAN.G588.109 Capsicum annuum HOM05D001734 ORTHO05D006943 1.5e-34 149.1 78 93.6
Nitab4.5_0004867g0090 Nicotiana tabacum HOM05D001734 ORTHO05D006943 3.5e-31 137.9 78 87.2
Nitab4.5_0004557g0050 Nicotiana tabacum HOM05D001734 ORTHO05D006943 5.0e-30 134.0 78 83.3
Peaxi162Scf00362g00442 Petunia axillaris HOM05D001734 ORTHO05D006943 1.6e-28 129.0 78 80.8
Dinv14134 Davidia involucrata HOM05D001734 ORTHO05D006943 6.6e-22 107.1 78 62.8
FvH4_2g15770 Fragaria vesca HOM05D001734 ORTHO05D006943 8.0e-20 100.1 76 59.2
FAN24G0945 Fragaria x ananassa HOM05D001734 ORTHO05D006943 8.0e-20 100.1 76 59.2
FAN27G0836 Fragaria x ananassa HOM05D001734 ORTHO05D006943 8.0e-20 100.1 76 59.2
CSS0001027 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 1.4e-19 99.4 75 62.7
CSS0020547 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 1.4e-19 99.4 75 62.7
Migut.B00045 Erythranthe guttata HOM05D001734 ORTHO05D006943 1.4e-19 99.4 77 58.4
Actinidia18030 Actinidia chinensis HOM05D001734 ORTHO05D006943 1.8e-19 99.0 78 55.1
GSVIVG01023964001 Vitis vinifera HOM05D001734 ORTHO05D006943 1.8e-19 99.0 79 57.0
Duzib052G0295 Durio zibethinus HOM05D001734 ORTHO05D006943 2.3e-19 98.6 79 57.0
FAN20G0548 Fragaria x ananassa HOM05D001734 ORTHO05D006943 2.3e-19 98.6 76 57.9
Prupe.8G170300 Prunus persica HOM05D001734 ORTHO05D006943 4.0e-19 97.8 79 54.4
Rhsim11G0194400 Rhododendron simsii HOM05D001734 ORTHO05D006943 4.0e-19 97.8 75 57.3
CiPaw.06G119600 Carya illinoinensis HOM05D001734 ORTHO05D006943 5.2e-19 97.4 78 57.7
Lj5A175T98 Lonicera japonica HOM05D001734 ORTHO05D006943 5.2e-19 97.4 77 61.0
PSO210G4774 Papaver somniferum HOM05D001734 ORTHO05D006943 6.8e-19 97.1 79 57.0
Sed0017558 Sechium edule HOM05D001734 ORTHO05D006943 6.8e-19 97.1 76 56.6
Gohir.D12G036700 Gossypium hirsutum HOM05D001734 ORTHO05D006943 1.2e-18 96.3 79 54.4
Gorai.008G037900 Gossypium raimondii HOM05D001734 ORTHO05D006943 1.2e-18 96.3 79 54.4
MELO3C013324.2 Cucumis melo HOM05D001734 ORTHO05D006943 1.5e-18 95.9 76 57.9
CsaV3_7G001280 Cucumis sativus L. HOM05D001734 ORTHO05D006943 1.5e-18 95.9 76 57.9
FAN15G3013 Fragaria x ananassa HOM05D001734 ORTHO05D006943 4.4e-18 94.4 76 56.6
ClCG02G003850 Citrullus lanatus HOM05D001734 ORTHO05D006943 5.8e-18 94.0 76 55.3
Haze_02089 Corylus avellana HOM05D001734 ORTHO05D006943 9.8e-18 93.2 79 54.4
Gohir.A12G035900 Gossypium hirsutum HOM05D001734 ORTHO05D006943 9.8e-18 93.2 79 53.2
MD05G1126600 Malus domestica HOM05D001734 ORTHO05D006943 1.7e-17 92.4 79 50.6
RcHm_v2.0_Chr6g0279121 Rosa chinensis HOM05D001734 ORTHO05D006943 1.7e-17 92.4 76 51.3
CANSAT25G2086 Cannabis sativa HOM05D001734 ORTHO05D006943 2.2e-17 92.0 79 51.9
Cfa005298 Carpinus fangiana HOM05D001734 ORTHO05D006943 2.9e-17 91.7 78 53.8
Cc09_g10400 Coffea canephora HOM05D001734 ORTHO05D006943 2.9e-17 91.7 78 56.4
PSO170G1896 Papaver somniferum HOM05D001734 ORTHO05D006943 2.9e-17 91.7 79 54.4
ECA234G4688 Erigeron canadensis HOM05D001734 ORTHO05D006943 4.9e-17 90.9 76 51.3
TWI79G0733 Tripterygium wilfordii HOM05D001734 ORTHO05D006943 6.4e-17 90.5 79 49.4
TAR628G1453 Trochodendron aralioides HOM05D001734 ORTHO05D006943 6.4e-17 90.5 79 50.6
Ciclev10027660m.g Citrus clementina HOM05D001734 ORTHO05D006943 8.3e-17 90.1 76 53.9
Cpa.g.sc20.125 Carica papaya HOM05D001734 ORTHO05D006943 1.1e-16 89.7 76 53.9
Phvul.007G016800 Phaseolus vulgaris HOM05D001734 ORTHO05D006943 1.1e-16 89.7 78 56.4
MBI18_g09841_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D006943 1.4e-16 89.4 79 53.2
arahy.Tifrunner.gnm1.ann1.M4HWYD Arachis hypogaea HOM05D001734 ORTHO05D006943 1.9e-16 89.0 78 55.1
Glyma.10G284200 Glycine max HOM05D001734 ORTHO05D006943 2.4e-16 88.6 78 52.6
Ca_03288_v3 Cicer arietinum L. HOM05D001734 ORTHO05D006943 3.2e-16 88.2 78 53.8
Manes.04G069900 Manihot esculenta HOM05D001734 ORTHO05D006943 4.1e-16 87.8 75 50.7
QL11p052553 Quercus lobata HOM05D001734 ORTHO05D006943 4.1e-16 87.8 98 45.9
Eucgr.I01462 Eucalyptus grandis HOM05D001734 ORTHO05D006943 5.4e-16 87.4 76 53.9
PGR142G2610 Punica granatum HOM05D001734 ORTHO05D006943 5.4e-16 87.4 75 52.0
HanXRQChr05g0141851 Helianthus annuus HOM05D001734 ORTHO05D006943 7.0e-16 87.0 78 50.0
Lj5g0001935 Lotus japonicus HOM05D001734 ORTHO05D006943 9.2e-16 86.7 79 53.2
SGA_v2.0_scaffold32G13315 Striga asiatica HOM05D001734 ORTHO05D006943 9.2e-16 86.7 90 47.8
Medtr1g113830 Medicago truncatula HOM05D001734 ORTHO05D006943 1.2e-15 86.3 76 53.9
TPR.G2477 Trifolium pratense HOM05D001734 ORTHO05D006943 1.2e-15 86.3 76 53.9
TPR.G2476 Trifolium pratense HOM05D001734 ORTHO05D006943 2.7e-15 85.1 75 53.3
AUR62010002 Chenopodium quinoa HOM05D001734 ORTHO05D006943 3.5e-15 84.7 78 55.1
VMungo0720G2261 Vigna mungo HOM05D001734 ORTHO05D006943 4.6e-15 84.3 78 51.3
Nn6g31886 Nelumbo nucifera HOM05D001734 ORTHO05D006943 6.0e-15 84.0 79 49.4
Lj1g0005537 Lotus japonicus HOM05D001873 ORTHO05D001976 7.8e-15 83.6 80 51.2
unitig_21.g20845 Utricularia gibba HOM05D001734 ORTHO05D006943 1.0e-14 83.2 76 55.3
Lsat_1_v5_gn_3_6601 Lactuca sativa HOM05D001734 ORTHO05D006943 1.3e-14 82.8 78 48.7
Psat6g232760 Pisum sativum HOM05D001734 ORTHO05D006943 1.3e-14 82.8 77 53.2
DCAR_022421 Daucus carota HOM05D001734 ORTHO05D006943 2.3e-14 82.0 78 48.7
AUR62012990 Chenopodium quinoa HOM05D001734 ORTHO05D006943 3.0e-14 81.6 78 52.6
Lalb_Chr06g0163781 Lupinus albus HOM05D001734 ORTHO05D006943 5.0e-14 80.9 78 50.0
HPP92_022388 Vanilla planifolia HOM05D001734 ORTHO05D006943 5.0e-14 80.9 79 45.6
Aqoxy5G01087 Aquilegia oxysepala HOM05D001734 ORTHO05D006943 6.6e-14 80.5 81 50.6
Sabra04G0120500 Salix brachista HOM05D001734 ORTHO05D006943 6.6e-14 80.5 76 47.4
Potri.004G179000 Populus trichocarpa HOM05D001734 ORTHO05D006943 8.6e-14 80.1 76 47.4
Ah.01g023340 Amaranthus hybridus HOM05D001734 ORTHO05D006943 1.1e-13 79.7 79 50.6
Thhalv10027615m.g Eutrema salsugineum HOM05D001734 ORTHO05D006943 1.1e-13 79.7 74 51.4
Oeu028956.2 Olea europaea HOM05D001734 ORTHO05D006943 2.1e-12 75.5 76 50.0
EL10Ac9g21328 Beta vulgaris HOM05D001734 ORTHO05D006943 2.8e-12 75.1 78 48.7
A04p15830 Brassica napus HOM05D001734 ORTHO05D006943 3.6e-12 74.7 74 45.9
BraA04t17214Z Brassica rapa HOM05D000482 ORTHO05D006943 3.6e-12 74.7 74 45.9
ATR0661G423 Amborella trichopoda HOM05D001734 ORTHO05D006943 1.1e-11 73.2 79 46.8
Aa31LG7G14750 Aethionema arabicum HOM05D001734 ORTHO05D006943 1.4e-11 72.8 74 44.6
Sc18g0006200 Simmondsia chinensis HOM05D001734 ORTHO05D006943 1.4e-11 72.8 78 42.3
BcaB06g27763 Brassica carinata HOM05D001734 ORTHO05D006943 2.3e-11 72.0 74 44.6
C04p50230 Brassica napus HOM05D001734 ORTHO05D006943 2.3e-11 72.0 74 44.6
BolC4t26623H Brassica oleracea HOM05D001734 ORTHO05D006943 2.3e-11 72.0 74 44.6
CARHR115960 Cardamine hirsuta HOM05D001734 ORTHO05D006943 3.1e-11 71.6 74 45.9
Sp4g00080 Schrenkiella parvula HOM05D001734 ORTHO05D006943 5.2e-11 70.9 73 45.2
vmacro02297 Vaccinium macrocarpon HOM05D001734 ORTHO05D006943 8.9e-11 70.1 48 56.2
Hma1.2p1_0032F.1_g019090 Hydrangea macrophylla HOM05D001734 ORTHO05D006943 1.2e-10 69.7 48 60.4
Zm00001eb228310 Zea mays HOM05D001734 ORTHO05D006943 1.2e-10 69.7 79 41.8
AL7G48900 Arabidopsis lyrata HOM05D001734 ORTHO05D006943 5.8e-10 67.4 74 45.9
AT5G40820 Arabidopsis thaliana HOM05D001734 ORTHO05D006943 3.7e-09 64.7 74 45.9
Hund00010 Selenicereus undatus HOM05D001734 ORTHO05D006943 3.7e-09 64.7 78 42.3
AagrBONN_evm.TU.Sc2ySwM_340.34 Anthoceros agrestis HOM05D001734 ORTHO05D006943 4.6e-07 57.8 79 31.6
Pp3c6_3460 Physcomitrium patens HOM05D001734 ORTHO05D006943 4.6e-07 57.8 79 39.2


User provided reference genes

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