Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 2.3e-37 159.1 129 100.0
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 2.5e-23 112.5 86 75.6
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 3.3e-23 112.1 87 90.8
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 3.3e-23 112.1 86 95.3
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.6e-22 109.8 86 90.7
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.6e-22 109.8 86 90.7
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 8.0e-22 107.5 86 80.2
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 8.0e-22 107.5 86 83.7
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 1.8e-21 106.3 86 90.7
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 1.5e-20 103.2 86 77.9
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 2.0e-20 102.8 86 62.8
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 2.6e-20 102.4 86 81.4
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 3.4e-20 102.1 86 61.6
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 5.7e-20 101.3 86 60.5
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 7.5e-20 100.9 86 81.4
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 9.8e-20 100.5 86 59.3
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 9.8e-20 100.5 86 62.8
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.3e-19 100.1 87 79.3
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.7e-19 99.8 86 75.6
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.7e-19 99.8 86 80.2
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 2.2e-19 99.4 86 72.1
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 4.9e-19 98.2 87 79.3
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 6.4e-19 97.8 87 75.9
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 8.3e-19 97.4 84 66.7
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 1.1e-18 97.1 87 71.3
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 1.4e-18 96.7 86 76.7
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 2.4e-18 95.9 86 75.6
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 2.4e-18 95.9 86 77.9
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 3.2e-18 95.5 89 71.9
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 3.2e-18 95.5 86 76.7
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 3.2e-18 95.5 86 80.2
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 5.4e-18 94.7 89 71.9
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 7.0e-18 94.4 90 72.2
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 9.2e-18 94.0 86 79.1
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 9.2e-18 94.0 87 71.3
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.2e-17 93.6 87 71.3
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.2e-17 93.6 86 73.3
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 1.6e-17 93.2 93 77.4
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 2.0e-17 92.8 85 75.3
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 2.7e-17 92.4 86 77.9
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 2.7e-17 92.4 86 77.9
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 4.6e-17 91.7 86 65.1
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 4.6e-17 91.7 86 73.3
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 4.6e-17 91.7 89 73.0
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 5.9e-17 91.3 86 68.6
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 5.9e-17 91.3 88 62.5
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 5.9e-17 91.3 88 76.1
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 5.9e-17 91.3 86 50.0
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 7.8e-17 90.9 88 76.1
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 7.8e-17 90.9 86 75.6
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 7.8e-17 90.9 90 71.1
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 7.8e-17 90.9 90 72.2
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 7.8e-17 90.9 90 72.2
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 1.0e-16 90.5 90 70.0
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 1.0e-16 90.5 86 74.4
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 1.0e-16 90.5 86 74.4
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 1.0e-16 90.5 86 73.3
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 1.0e-16 90.5 91 76.9
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.3e-16 90.1 86 57.0
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 1.3e-16 90.1 90 51.1
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 1.7e-16 89.7 87 75.9
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 1.7e-16 89.7 87 75.9
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 1.7e-16 89.7 86 74.4
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 1.7e-16 89.7 87 51.7
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.3e-16 89.4 86 72.1
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 2.3e-16 89.4 84 65.5
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 3.0e-16 89.0 89 51.7
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 3.9e-16 88.6 86 74.4
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 5.0e-16 88.2 91 70.3
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 5.0e-16 88.2 107 48.6
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 8.6e-16 87.4 86 67.4
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 8.6e-16 87.4 86 73.3
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 1.1e-15 87.0 87 74.7
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 1.5e-15 86.7 86 47.7
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 1.9e-15 86.3 86 73.3
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 2.5e-15 85.9 90 68.9
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 2.5e-15 85.9 88 76.1
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 2.5e-15 85.9 88 76.1
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 3.3e-15 85.5 85 75.3
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 5.6e-15 84.7 86 70.9
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 5.6e-15 84.7 86 69.8
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 1.2e-14 83.6 86 74.4
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 6.2e-14 81.3 87 72.4
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 6.2e-14 81.3 86 46.5
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 8.0e-14 80.9 82 75.6
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 8.0e-14 80.9 89 75.3
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 1.4e-13 80.1 86 51.2
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 2.3e-13 79.3 115 40.9
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 2.0e-12 76.3 99 64.6
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 2.0e-12 76.3 90 68.9
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 3.4e-12 75.5 84 71.4
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 5.8e-12 74.7 89 58.4
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 2.2e-11 72.8 91 46.2
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 4.1e-10 68.6 90 44.4
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 4.1e-10 68.6 90 44.4
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 4.1e-10 68.6 87 41.4
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 4.1e-10 68.6 87 66.7
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 7.0e-10 67.8 73 49.3
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 1.2e-09 67.0 90 67.8
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 2.7e-09 65.9 90 66.7
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 4.6e-09 65.1 92 51.1
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 4.6e-09 65.1 89 67.4
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 4.6e-09 65.1 88 68.2
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 7.8e-09 64.3 89 69.7
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 3.0e-08 62.4 85 40.0
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 3.0e-08 62.4 57 56.1
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 5.0e-08 61.6 71 60.6
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 6.6e-08 61.2 90 63.3
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 6.6e-08 61.2 41 78.0
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 8.6e-08 60.8 61 73.8
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 1.5e-07 60.1 86 40.7
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 1.5e-07 60.1 91 63.7
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 9.5e-07 57.4 89 61.8
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 2.8e-06 55.8 58 67.2
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 4.7e-06 55.1 60 46.7
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 4.7e-06 55.1 89 64.0
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 6.2e-06 54.7 93 59.1


User provided reference genes

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