Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400041064 Solanum tuberosum HOM05D000725 ORTHO05D014250 1.7e-128 463.4 388 100.0
PGSC0003DMG400017460 Solanum tuberosum HOM05D000725 ORTHO05D014250 9.4e-42 175.3 147 76.9
PGSC0003DMG400001852 Solanum tuberosum HOM05D000725 ORTHO05D002005 6.1e-33 146.0 108 73.1
Sopen08g026150 Solanum pennellii HOM05D000725 ORTHO05D002005 1.5e-26 124.8 76 81.6
PGSC0003DMG400014445 Solanum tuberosum HOM05D000725 ORTHO05D002005 4.7e-25 119.8 80 76.2
Sopen08g017620 Solanum pennellii HOM05D000725 ORTHO05D002005 6.8e-24 115.9 76 78.9
Solyc08g077610.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.2e-20 105.1 53 90.6
Solyc02g033050.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.0e-20 104.4 55 87.3
Solyc08g061390.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 4.3e-18 96.7 54 83.3
Sopen01g030290 Solanum pennellii HOM05D000725 ORTHO05D002005 1.2e-17 95.1 53 81.1
PGSC0003DMG400006745 Solanum tuberosum HOM05D000725 ORTHO05D002005 1.6e-17 94.7 53 81.1
Sopen01g030250 Solanum pennellii HOM05D000725 ORTHO05D002005 2.1e-17 94.4 53 81.1
Sopen01g030260 Solanum pennellii HOM05D000725 ORTHO05D002005 2.1e-17 94.4 53 81.1
CAN.G1445.14 Capsicum annuum HOM05D000725 ORTHO05D002005 2.8e-17 94.0 64 68.8
Solyc01g068293.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.8e-17 94.0 53 81.1
Solyc01g068297.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.8e-17 94.0 53 81.1
Solyc01g068320.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 4.7e-17 93.2 52 80.8
PGSC0003DMG400001835 Solanum tuberosum HOM05D000725 ORTHO05D002005 5.2e-16 89.7 53 79.2
Solyc08g077670.3 Solanum lycopersicum HOM05D000725 ORTHO05D014250 1.5e-15 88.2 68 66.2
PGSC0003DMG400014992 Solanum tuberosum HOM05D000725 ORTHO05D002005 1.5e-15 88.2 53 75.5
Solyc01g060460.2 Solanum lycopersicum HOM05D000725 ORTHO05D002005 7.5e-15 85.9 53 73.6
Sopen01g026600 Solanum pennellii HOM05D000725 ORTHO05D002005 7.5e-15 85.9 53 73.6
CAN.G572.31 Capsicum annuum HOM05D000725 ORTHO05D002005 1.7e-14 84.7 55 72.7
Sopen04g024270 Solanum pennellii HOM05D000725 ORTHO05D002005 1.7e-14 84.7 67 61.2
PGSC0003DMG400001851 Solanum tuberosum HOM05D000725 ORTHO05D002005 2.2e-14 84.3 53 71.7
Solyc04g054440.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.9e-14 84.0 67 61.2
Sopen08g026200 Solanum pennellii HOM05D000725 ORTHO05D002005 2.9e-14 84.0 53 73.6
CAN.G1016.5 Capsicum annuum HOM05D000725 ORTHO05D002005 3.7e-14 83.6 53 69.8
Solyc08g077690.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 3.7e-14 83.6 53 73.6
CAN.G916.9 Capsicum annuum HOM05D000725 ORTHO05D002005 1.1e-13 82.0 57 66.7
Solyc08g077570.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 4.1e-13 80.1 43 86.0
Nitab4.5_0002559g0010 Nicotiana tabacum HOM05D000725 ORTHO05D002005 2.7e-12 77.4 60 61.7
CAN.G249.5 Capsicum annuum HOM05D000725 ORTHO05D002005 3.5e-12 77.0 52 69.2
Nitab4.5_0001981g0020 Nicotiana tabacum HOM05D000725 ORTHO05D002005 3.5e-12 77.0 49 71.4
PGSC0003DMG400006747 Solanum tuberosum HOM05D000725 ORTHO05D002005 7.8e-12 75.9 53 71.7
PGSC0003DMG400039340 Solanum tuberosum HOM05D000725 ORTHO05D014250 1.3e-11 75.1 93 49.5
PGSC0003DMG400035515 Solanum tuberosum HOM05D000725 ORTHO05D002005 1.1e-10 72.0 41 80.5
CAN.G649.4 Capsicum annuum HOM05D000725 ORTHO05D002005 2.5e-10 70.9 55 63.6
Sopen08g016780 Solanum pennellii HOM05D000725 ORTHO05D002005 1.4e-08 65.1 48 72.9
Sopen08g026180 Solanum pennellii HOM05D000725 ORTHO05D014250 1.4e-08 65.1 58 60.3
FvH4_5g20730 Fragaria vesca HOM05D000725 ORTHO05D002005 5.2e-08 63.2 63 46.0
FAN04G2213 Fragaria x ananassa HOM05D000725 ORTHO05D002005 5.2e-08 63.2 63 46.0
FAN08G1755 Fragaria x ananassa HOM05D000725 ORTHO05D002005 5.2e-08 63.2 63 46.0
FAN18G0116 Fragaria x ananassa HOM05D000725 ORTHO05D002005 5.2e-08 63.2 63 46.0
FvH4_7g20540 Fragaria vesca HOM05D000725 ORTHO05D002005 1.2e-07 62.0 63 46.0
FAN03G0676 Fragaria x ananassa HOM05D000725 ORTHO05D002005 1.5e-07 61.6 63 46.0
FAN06G2800 Fragaria x ananassa HOM05D000725 ORTHO05D002005 1.5e-07 61.6 63 46.0
FAN06G4690 Fragaria x ananassa HOM05D000725 ORTHO05D002005 1.5e-07 61.6 63 46.0
FAN10G1759 Fragaria x ananassa HOM05D000725 ORTHO05D002005 1.5e-07 61.6 63 46.0
Cfa012353 Carpinus fangiana HOM05D000725 ORTHO05D002005 2.6e-07 60.8 52 48.1
FAN01G2656 Fragaria x ananassa HOM05D000725 ORTHO05D002005 5.8e-07 59.7 63 44.4
FAN01G3160 Fragaria x ananassa HOM05D000725 ORTHO05D002005 5.8e-07 59.7 63 44.4
COL.COLO4_25147 Corchorus olitorius HOM05D000725 ORTHO05D002005 7.5e-07 59.3 45 57.8
Haze_08343 Corylus avellana HOM05D000725 ORTHO05D002005 1.7e-06 58.2 48 50.0
CiPaw.12G056600 Carya illinoinensis HOM05D000725 ORTHO05D002005 3.7e-06 57.0 45 51.1
RcHm_v2.0_Chr2g0150021 Rosa chinensis HOM05D000725 ORTHO05D002005 4.9e-06 56.6 63 46.0
MD17G1146600 Malus domestica HOM05D000725 ORTHO05D002005 8.3e-06 55.8 45 46.7


User provided reference genes

Program Settings