Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400027658 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.5e-78 293.9 138 100.0
Peaxi162Scf00138g01512 Petunia axillaris HOM05D000155 ORTHO05D000022 1.2e-18 97.1 132 38.6
Nitab4.5_0000008g0280 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-17 93.6 132 40.2
Nitab4.5_0000455g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.7e-17 92.0 131 38.2
PGSC0003DMG400031354 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.7e-15 85.9 127 33.9
Cc11_g02100 Coffea canephora HOM05D000003 ORTHO05D000022 4.6e-15 85.1 126 34.9
PGSC0003DMG400024870 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.0e-15 84.7 138 33.3
PGSC0003DMG400037811 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.0e-15 84.7 119 37.0
Nitab4.5_0001443g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-14 83.2 128 35.9
Peaxi162Scf00776g00232 Petunia axillaris HOM05D000155 ORTHO05D000022 1.7e-14 83.2 115 41.7
PGSC0003DMG400020870 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.9e-14 82.0 138 34.8
Peaxi162Scf00700g00035 Petunia axillaris HOM05D000155 ORTHO05D000022 8.6e-14 80.9 129 31.8
Peaxi162Scf00362g00102 Petunia axillaris HOM05D009863 ORTHO05D000022 1.1e-13 80.5 115 40.9
Peaxi162Scf00700g00339 Petunia axillaris HOM05D000273 ORTHO05D000022 1.9e-13 79.7 126 32.5
PGSC0003DMG400037922 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.3e-13 78.6 137 36.5
Nitab4.5_0000374g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.6e-13 78.2 108 38.0
Peaxi162Scf00983g00034 Petunia axillaris HOM05D000155 ORTHO05D000022 7.3e-13 77.8 113 38.1
Nitab4.5_0008416g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.5e-13 77.4 113 37.2
Sopen04g008670 Solanum pennellii HOM05D000155 ORTHO05D000022 9.5e-13 77.4 139 36.0
Nitab4.5_0002372g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-12 76.6 113 37.2
Nitab4.5_0004793g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-12 76.6 135 35.6
Peaxi162Scf01052g00322 Petunia axillaris HOM05D003623 ORTHO05D035648 1.6e-12 76.6 105 36.2
PGSC0003DMG400023541 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.2e-12 74.7 113 36.3
Nitab4.5_0000009g0390 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.1e-12 74.3 132 34.1
Peaxi162Scf00537g00047 Petunia axillaris HOM05D000155 ORTHO05D000022 1.1e-11 73.9 132 36.4
Nitab4.5_0000692g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-11 72.8 139 31.7
Nitab4.5_0006628g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.1e-11 72.4 112 35.7
Peaxi162Scf00252g00032 Petunia axillaris HOM05D000155 ORTHO05D000022 4.0e-11 72.0 136 32.4
Nitab4.5_0001440g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.8e-11 71.2 115 33.9
Cc00_g03270 Coffea canephora HOM05D000155 ORTHO05D000022 8.9e-11 70.9 114 36.0
Cc00_g05820 Coffea canephora HOM05D000155 ORTHO05D000022 8.9e-11 70.9 114 36.0
Nitab4.5_0001567g0130 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-10 70.5 140 32.1
Peaxi162Scf00041g00183 Petunia axillaris HOM05D000155 ORTHO05D000022 1.5e-10 70.1 132 34.8
Peaxi162Scf00477g00022 Petunia axillaris HOM05D000155 ORTHO05D000022 2.6e-10 69.3 134 29.9
Nitab4.5_0000769g0160 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.4e-10 68.9 134 32.1
PGSC0003DMG400000971 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.4e-10 68.6 125 36.0
MBI18_g08822_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.8e-10 68.2 129 35.7
Peaxi162Scf00229g00123 Petunia axillaris HOM05D000155 ORTHO05D000022 5.8e-10 68.2 134 35.1
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 7.5e-10 67.8 134 33.6
Nitab4.5_0000036g0200 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.8e-10 67.4 118 35.6
PGSC0003DMG400046426 Solanum tuberosum HOM05D001426 ORTHO05D001389 1.3e-09 67.0 119 34.5
Nitab4.5_0000551g0190 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-09 66.6 97 36.1
Nitab4.5_0013636g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-09 66.6 106 34.9
Nitab4.5_0004294g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.2e-09 66.2 135 32.6
PGSC0003DMG400012094 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.9e-09 65.9 119 29.4
PGSC0003DMG400015929 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.9e-09 65.9 121 31.4
Nitab4.5_0010557g0030 Nicotiana tabacum HOM05D009916 ORTHO05D000022 4.9e-09 65.1 91 41.8
Nitab4.5_0000249g0120 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.3e-09 64.3 130 32.3
Nitab4.5_0000613g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.3e-09 64.3 90 37.8
Nitab4.5_0000637g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000022 8.3e-09 64.3 140 31.4
Nitab4.5_0000758g0170 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.3e-09 64.3 112 35.7
Nitab4.5_0002445g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.3e-09 64.3 82 39.0
Peaxi162Scf00688g10013 Petunia axillaris HOM05D000385 ORTHO05D000269 1.1e-08 63.9 118 32.2
Nitab4.5_0003841g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-08 62.8 140 29.3
Cc00_g05270 Coffea canephora HOM05D000155 ORTHO05D000022 3.2e-08 62.4 131 33.6
Nitab4.5_0002324g0030 Nicotiana tabacum HOM05D014153 ORTHO05D016355 4.1e-08 62.0 90 34.4
Nitab4.5_0004849g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.4e-08 61.6 141 29.1
Nitab4.5_0000188g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-07 60.5 139 31.7
Nitab4.5_0001704g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-07 60.5 119 29.4
Nitab4.5_0003456g0100 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-07 60.5 104 30.8
Nitab4.5_0004115g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-07 60.5 83 42.2
Peaxi162Scf00160g01638 Petunia axillaris HOM05D000155 ORTHO05D000022 1.2e-07 60.5 138 28.3
Nitab4.5_0000213g0180 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-07 60.1 133 29.3
Nitab4.5_0001164g0130 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-07 60.1 115 31.3
CiPaw.04G193300 Carya illinoinensis HOM05D000053 ORTHO05D000035 2.1e-07 59.7 124 31.5
Peaxi162Scf00423g00097 Petunia axillaris HOM05D000155 ORTHO05D000022 2.1e-07 59.7 120 30.0
Sabra11G0000200 Salix brachista HOM05D000155 ORTHO05D000022 2.1e-07 59.7 134 29.9
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-07 59.7 140 30.0
Nitab4.5_0004235g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.7e-07 59.3 138 28.3
PGSC0003DMG400000646 Solanum tuberosum HOM05D000155 ORTHO05D025925 2.7e-07 59.3 118 29.7
TAR014G0002 Trochodendron aralioides HOM05D000155 ORTHO05D000022 3.5e-07 58.9 124 36.3
MBI16_g05924_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.6e-07 58.5 131 29.0
Nitab4.5_0000650g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.6e-07 58.5 98 31.6
Nitab4.5_0011459g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.0e-07 58.2 77 35.1
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 6.0e-07 58.2 119 31.9
Nitab4.5_0000190g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.8e-07 57.8 117 30.8
Peaxi162Scf00182g01115 Petunia axillaris HOM05D052467 ORTHO05D050240 7.8e-07 57.8 86 33.7
Nitab4.5_0000011g0240 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.0e-06 57.4 110 34.5
Nitab4.5_0001289g0120 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-06 57.0 136 29.4
Nitab4.5_0005500g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-06 57.0 129 27.9
Peaxi162Scf00236g00081 Petunia axillaris HOM05D000155 ORTHO05D000022 1.3e-06 57.0 120 30.0
Nitab4.5_0000477g0070 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-06 56.6 111 34.2
Nitab4.5_0007262g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-06 56.6 146 32.9
Solyc08g076760.1 Solanum lycopersicum HOM05D000155 ORTHO05D000022 1.7e-06 56.6 80 43.8
Cc00_g15230 Coffea canephora HOM05D000155 ORTHO05D000022 2.3e-06 56.2 110 30.9
Nitab4.5_0000274g0280 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-06 56.2 102 33.3
Nitab4.5_0000789g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-06 56.2 124 26.6
Sabra06G0000400 Salix brachista HOM05D000003 ORTHO05D000004 2.3e-06 56.2 133 29.3
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 2.3e-06 56.2 124 30.6
Sopen02g028750 Solanum pennellii HOM05D000155 ORTHO05D000022 2.3e-06 56.2 124 30.6
Lj8P356T29 Lonicera japonica HOM05D000155 ORTHO05D000022 3.0e-06 55.8 126 32.5
Peaxi162Scf38623g00002 Petunia axillaris HOM05D000155 ORTHO05D000022 3.0e-06 55.8 107 33.6
Peaxi162Scf00223g00111 Petunia axillaris HOM05D000155 ORTHO05D000022 5.1e-06 55.1 120 29.2
SHI31030 Sapria himalayana HOM05D004990 ORTHO05D000022 5.1e-06 55.1 129 27.9
Nitab4.5_0000009g0450 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.6e-06 54.3 133 30.1
Nitab4.5_0000254g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.6e-06 54.3 98 33.7


User provided reference genes

Program Settings