Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024128 Solanum tuberosum HOM05D003777 ORTHO05D004690 7.8e-211 736.9 375 100.0
CAN.G487.1 Capsicum annuum HOM05D003777 ORTHO05D004690 2.1e-83 313.5 180 90.6
Solyc11g062270.2 Solanum lycopersicum HOM05D003777 ORTHO05D004690 3.1e-82 309.7 180 90.0
Nitab4.5_0000492g0120 Nicotiana tabacum HOM05D003777 ORTHO05D004690 3.4e-81 306.2 179 88.3
Nitab4.5_0002026g0090 Nicotiana tabacum HOM05D003777 ORTHO05D004690 3.4e-81 306.2 180 87.8
Sopen11g024250 Solanum pennellii HOM05D003777 ORTHO05D004690 3.4e-81 306.2 180 88.9
Peaxi162Scf00029g02527 Petunia axillaris HOM05D003777 ORTHO05D004690 4.9e-80 302.4 180 87.2
Nitab4.5_0002757g0020 Nicotiana tabacum HOM05D003777 ORTHO05D004690 8.7e-77 291.6 180 83.3
Migut.D00587 Erythranthe guttata HOM05D003777 ORTHO05D004690 1.2e-70 271.2 180 75.6
Prupe.1G234800 Prunus persica HOM05D003777 ORTHO05D004690 3.5e-70 269.6 188 73.9
CSS0004768 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 4.6e-70 269.2 180 76.7
CSS0018349 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 6.1e-70 268.9 180 76.1
QL03p055332 Quercus lobata HOM05D003777 ORTHO05D004690 1.8e-69 267.3 188 73.4
Potri.006G216400 Populus trichocarpa HOM05D003777 ORTHO05D004690 6.7e-69 265.4 186 73.7
DCAR_021625 Daucus carota HOM05D003777 ORTHO05D004690 1.1e-68 264.6 188 72.9
Sabra06G0166800 Salix brachista HOM05D003777 ORTHO05D004690 3.3e-68 263.1 186 72.6
DCAR_021624 Daucus carota HOM05D003777 ORTHO05D004690 5.7e-68 262.3 188 71.8
TWI36G1566 Tripterygium wilfordii HOM05D003777 ORTHO05D004690 2.2e-67 260.4 188 71.3
Oeu015952.1 Olea europaea HOM05D003777 ORTHO05D004690 6.3e-67 258.8 188 72.9
PGSC0003DMG400032494 Solanum tuberosum HOM05D003777 ORTHO05D004690 2.4e-66 256.9 147 89.8
CiPaw.05G173500 Carya illinoinensis HOM05D003777 ORTHO05D004690 3.1e-66 256.5 188 70.2
Dinv18168 Davidia involucrata HOM05D003777 ORTHO05D004690 4.1e-66 256.1 182 73.1
TWI75G0300 Tripterygium wilfordii HOM05D003777 ORTHO05D004690 6.9e-66 255.4 188 69.7
Aqoxy5G03557 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 1.2e-65 254.6 186 68.8
SGA_v2.0_scaffold247G44863 Striga asiatica HOM05D003777 ORTHO05D004690 1.2e-65 254.6 188 70.7
Sed0005823 Sechium edule HOM05D003777 ORTHO05D004690 2.0e-65 253.8 188 68.1
Thecc.02G272700 Theobroma cacao HOM05D003777 ORTHO05D004690 2.0e-65 253.8 186 69.9
TAR374G0928 Trochodendron aralioides HOM05D003777 ORTHO05D004690 2.0e-65 253.8 186 71.0
TAR374G1267 Trochodendron aralioides HOM05D003777 ORTHO05D004690 2.0e-65 253.8 188 70.2
MSTRG.12471 Avicennia marina HOM05D003777 ORTHO05D004690 2.6e-65 253.4 180 73.3
Glyma.05G144700 Glycine max HOM05D003777 ORTHO05D004690 3.4e-65 253.1 188 70.7
Manes.12G016400 Manihot esculenta HOM05D003777 ORTHO05D004690 5.9e-65 252.3 196 66.8
Hund25014 Selenicereus undatus HOM05D003777 ORTHO05D004690 5.9e-65 252.3 187 71.1
Ca_18071_v3 Cicer arietinum L. HOM05D003777 ORTHO05D004690 1.3e-64 251.1 188 69.1
arahy.Tifrunner.gnm1.ann1.SED4J7 Arachis hypogaea HOM05D003777 ORTHO05D004690 1.7e-64 250.8 183 70.5
Medtr8g079990 Medicago truncatula HOM05D003777 ORTHO05D004690 2.2e-64 250.4 186 69.9
arahy.Tifrunner.gnm1.ann1.35MH8V Arachis hypogaea HOM05D003777 ORTHO05D004690 2.9e-64 250.0 183 69.9
TPR.G27143 Trifolium pratense HOM05D003777 ORTHO05D004690 3.8e-64 249.6 186 70.4
AL2G26380 Arabidopsis lyrata HOM05D003777 ORTHO05D004690 5.0e-64 249.2 188 68.1
Psat7g080080 Pisum sativum HOM05D003777 ORTHO05D004690 6.5e-64 248.8 186 68.8
Carub.0002s1402 Capsella rubella HOM05D003777 ORTHO05D004690 8.5e-64 248.4 188 68.1
Lj4g0007172 Lotus japonicus HOM05D003777 ORTHO05D004690 8.5e-64 248.4 183 71.0
AT1G67680 Arabidopsis thaliana HOM05D003777 ORTHO05D004690 1.1e-63 248.1 188 67.6
CANSAT01G1767 Cannabis sativa HOM05D003777 ORTHO05D004690 1.9e-63 247.3 188 67.6
Carub.0002s1406 Capsella rubella HOM05D003777 ORTHO05D004690 1.9e-63 247.3 188 68.1
THA.LOC104825526 Tarenaya hassleriana HOM05D003777 ORTHO05D004690 2.5e-63 246.9 189 68.3
PSO170G4787 Papaver somniferum HOM05D003777 ORTHO05D004690 3.2e-63 246.5 183 69.9
HanXRQChr04g0126141 Helianthus annuus HOM05D003777 ORTHO05D004690 2.1e-62 243.8 181 70.2
Lsat_1_v5_gn_2_96961 Lactuca sativa HOM05D003777 ORTHO05D004690 3.6e-62 243.0 180 68.3
Phvul.002G176900 Phaseolus vulgaris HOM05D003777 ORTHO05D004690 3.6e-62 243.0 186 68.8
ECA233G1683 Erigeron canadensis HOM05D003777 ORTHO05D004690 4.6e-62 242.7 188 66.5
Aa31LG4G12090 Aethionema arabicum HOM05D003777 ORTHO05D004690 6.1e-62 242.3 188 64.4
MD16G1110000 Malus domestica HOM05D003777 ORTHO05D004690 1.1e-60 238.0 188 68.1
PSO063G1619 Papaver somniferum HOM05D003777 ORTHO05D004690 1.1e-60 238.0 188 66.5
MD13G1110100 Malus domestica HOM05D003777 ORTHO05D004690 1.5e-60 237.7 188 67.6
Sp5g22670 Schrenkiella parvula HOM05D003777 ORTHO05D004690 2.0e-60 237.3 188 64.9
AT1G67650 Arabidopsis thaliana HOM05D003777 ORTHO05D004690 2.5e-60 236.9 188 64.4
Thhalv10018246m.g Eutrema salsugineum HOM05D003777 ORTHO05D004690 2.5e-60 236.9 188 64.9
vmacro01091 Vaccinium macrocarpon HOM05D003777 ORTHO05D004690 3.3e-60 236.5 181 68.5
CARHR060270 Cardamine hirsuta HOM05D003777 ORTHO05D004690 5.7e-60 235.7 188 62.8
BcaB03g15177 Brassica carinata HOM05D003777 ORTHO05D004690 7.4e-60 235.3 188 64.4
BcaC08g46176 Brassica carinata HOM05D003777 ORTHO05D004690 9.7e-60 235.0 188 63.8
C06p42580 Brassica napus HOM05D003777 ORTHO05D004690 9.7e-60 235.0 188 63.8
BolC6t39181H Brassica oleracea HOM05D003777 ORTHO05D004690 9.7e-60 235.0 188 63.8
A07p32470 Brassica napus HOM05D003777 ORTHO05D004690 1.3e-59 234.6 188 64.4
GSVIVG01010320001 Vitis vinifera HOM05D003777 ORTHO05D004690 1.7e-59 234.2 186 67.7
unitig_744.g24046 Utricularia gibba HOM05D003777 ORTHO05D004690 3.7e-59 233.0 188 63.8
CSS0034811 Camellia sinensis var. sinensis HOM05D003777 ORTHO05D004690 6.3e-59 232.3 179 68.7
RcHm_v2.0_Chr4g0431561 Rosa chinensis HOM05D003777 ORTHO05D004690 3.1e-58 229.9 188 66.0
COL.COLO4_23602 Corchorus olitorius HOM05D003777 ORTHO05D004690 6.9e-58 228.8 175 66.9
Ah.10g034950 Amaranthus hybridus HOM05D003777 ORTHO05D004690 9.1e-58 228.4 187 63.1
FAN07G0030 Fragaria x ananassa HOM05D003777 ORTHO05D004690 9.1e-58 228.4 188 65.4
FvH4_4g24580 Fragaria vesca HOM05D003777 ORTHO05D004690 3.4e-57 226.5 188 64.9
FAN12G3799 Fragaria x ananassa HOM05D003777 ORTHO05D004690 3.4e-57 226.5 188 64.9
RcHm_v2.0_Chr4g0431581 Rosa chinensis HOM05D003777 ORTHO05D004690 3.4e-57 226.5 188 64.9
Lalb_Chr12g0206401 Lupinus albus HOM05D003777 ORTHO05D004690 4.5e-57 226.1 188 64.9
Lalb_Chr12g0206431 Lupinus albus HOM05D003777 ORTHO05D004690 4.5e-57 226.1 188 64.9
Lalb_Chr12g0206451 Lupinus albus HOM05D003777 ORTHO05D004690 4.5e-57 226.1 188 64.9
Manes.13G014300 Manihot esculenta HOM05D003777 ORTHO05D004690 7.7e-57 225.3 186 65.1
TAR622G1358 Trochodendron aralioides HOM05D003777 ORTHO05D004690 1.0e-56 224.9 177 67.8
FAN22G1648 Fragaria x ananassa HOM05D003777 ORTHO05D004690 2.2e-56 223.8 188 64.4
PGR102G0273 Punica granatum HOM05D003777 ORTHO05D004690 3.8e-56 223.0 188 64.9
Nitab4.5_0001925g0190 Nicotiana tabacum HOM05D003777 ORTHO05D004690 8.5e-56 221.9 181 67.4
Sc04g0009890 Simmondsia chinensis HOM05D003777 ORTHO05D004690 1.1e-55 221.5 188 62.8
FAN17G2971 Fragaria x ananassa HOM05D003777 ORTHO05D004690 2.5e-55 220.3 188 63.8
Lj2C633G4 Lonicera japonica HOM05D003777 ORTHO05D004690 3.2e-55 219.9 188 62.2
Rhsim12G0035800 Rhododendron simsii HOM05D003777 ORTHO05D004690 4.2e-55 219.5 181 65.2
BolC2t08468H Brassica oleracea HOM05D003777 ORTHO05D004690 9.4e-55 218.4 190 60.5
arahy.Tifrunner.gnm1.ann1.238UV6 Arachis hypogaea HOM05D003777 ORTHO05D004690 1.6e-54 217.6 183 63.9
Lalb_Chr07g0187251 Lupinus albus HOM05D003777 ORTHO05D004690 1.6e-54 217.6 188 62.2
Actinidia08096 Actinidia chinensis HOM05D003777 ORTHO05D004690 2.7e-54 216.9 169 68.6
Cfa009302 Carpinus fangiana HOM05D003777 ORTHO05D004690 2.7e-54 216.9 188 63.8
Glyma.08G101100 Glycine max HOM05D003777 ORTHO05D004690 3.6e-54 216.5 186 62.9
Dinv11003 Davidia involucrata HOM05D003777 ORTHO05D004690 6.1e-54 215.7 180 64.4
VMungo0251G0828 Vigna mungo HOM05D003777 ORTHO05D004690 6.1e-54 215.7 188 62.8
arahy.Tifrunner.gnm1.ann1.9WV3XJ Arachis hypogaea HOM05D003777 ORTHO05D004690 7.9e-54 215.3 183 63.4
Os01g0889000 Oryza sativa ssp. japonica HOM05D003777 ORTHO05D004690 7.9e-54 215.3 191 59.7
Zm00001eb145240 Zea mays HOM05D003777 ORTHO05D004690 7.9e-54 215.3 191 59.2
Atru.chr11.2223 Acer truncatum HOM05D003777 ORTHO05D004690 3.9e-53 213.0 188 60.6
Hma1.2p1_0079F.1_g041650 Hydrangea macrophylla HOM05D003777 ORTHO05D004690 5.1e-53 212.6 179 64.8
Duzib248G0478 Durio zibethinus HOM05D003777 ORTHO05D004690 6.7e-53 212.2 186 61.3
Gohir.D05G312600 Gossypium hirsutum HOM05D003777 ORTHO05D004690 2.6e-52 210.3 188 60.6
Gohir.A05G311500 Gossypium hirsutum HOM05D003777 ORTHO05D004690 3.3e-52 209.9 188 60.1
Duzib268G0959 Durio zibethinus HOM05D003777 ORTHO05D004690 4.4e-52 209.5 186 60.8
BraA07t31048Z Brassica rapa HOM05D003777 ORTHO05D004690 7.4e-52 208.8 293 44.7
Cpa.g.sc86.2 Carica papaya HOM05D003777 ORTHO05D004690 7.4e-52 208.8 186 59.7
TPR.G17105 Trifolium pratense HOM05D003777 ORTHO05D004690 9.7e-52 208.4 186 60.2
Gorai.009G334100 Gossypium raimondii HOM05D003777 ORTHO05D004690 1.3e-51 208.0 188 60.1
Eucgr.B03455 Eucalyptus grandis HOM05D003777 ORTHO05D004690 3.7e-51 206.5 186 60.2
ClCG05G026250 Citrullus lanatus HOM05D003777 ORTHO05D004690 1.8e-50 204.1 188 58.0
MBI11_g31858_MAGBIO Magnolia biondii HOM05D003777 ORTHO05D004690 7.0e-50 202.2 186 59.1
Sed0021346 Sechium edule HOM05D003777 ORTHO05D004690 1.5e-49 201.1 188 58.0
MELO3C011898.2 Cucumis melo HOM05D003777 ORTHO05D004690 2.6e-49 200.3 188 56.9
CsaV3_5G030580 Cucumis sativus L. HOM05D003777 ORTHO05D004690 4.5e-49 199.5 188 56.4
AUR62017138 Chenopodium quinoa HOM05D003777 ORTHO05D004690 5.9e-49 199.1 187 58.8
AUR62017151 Chenopodium quinoa HOM05D003777 ORTHO05D004690 7.7e-49 198.7 187 58.8
A07p34190 Brassica napus HOM05D003777 ORTHO05D004690 1.7e-48 197.6 188 56.9
AUR62035656 Chenopodium quinoa HOM05D003777 ORTHO05D004690 6.5e-48 195.7 187 58.3
EL10Ac9g22111 Beta vulgaris HOM05D003777 ORTHO05D004690 2.5e-47 193.7 185 58.4
SHI17928 Sapria himalayana HOM05D003777 ORTHO05D004690 2.7e-46 190.3 180 57.8
SEGI_14731 Sequoiadendron giganteum HOM05D003777 ORTHO05D004690 4.4e-44 183.0 173 54.3
C06p38540 Brassica napus HOM05D003777 ORTHO05D004690 9.1e-42 175.3 127 70.9
HPP92_012793 Vanilla planifolia HOM05D003777 ORTHO05D004690 2.5e-39 167.2 183 51.4
ATR0824G106 Amborella trichopoda HOM05D003777 ORTHO05D004690 3.2e-39 166.8 175 50.9
AL2G26340 Arabidopsis lyrata HOM05D003777 ORTHO05D004690 3.2e-39 166.8 134 62.7
CDE07G0923 Ceratophyllum demersum HOM05D003777 ORTHO05D004690 7.2e-39 165.6 188 48.9
BcaB03g15368 Brassica carinata HOM05D003777 ORTHO05D004690 1.6e-38 164.5 138 60.1
Oeu007469.1 Olea europaea HOM05D003777 ORTHO05D004690 3.6e-38 163.3 133 67.7
Mapoly0007s0138 Marchantia polymorpha HOM05D003777 ORTHO05D004690 3.1e-34 150.2 173 48.0
C02p23330 Brassica napus HOM05D003777 ORTHO05D004690 9.1e-34 148.7 113 65.5
CBR_g26341 Chara braunii HOM05D003777 ORTHO05D004690 7.7e-33 145.6 174 47.1
Ciclev10030955m.g Citrus clementina HOM05D003777 ORTHO05D004690 1.3e-32 144.8 186 48.9
ECA238G3243 Erigeron canadensis HOM05D003777 ORTHO05D004690 1.5e-31 141.4 104 65.4
Pp3c19_7700 Physcomitrium patens HOM05D003777 ORTHO05D004690 2.1e-30 137.5 174 42.0
SMO356G0370 Selaginella moellendorffii HOM05D003777 ORTHO05D004690 1.2e-28 131.7 171 44.4
Actinidia30683 Actinidia chinensis HOM05D003777 ORTHO05D004690 4.1e-26 123.2 183 48.6
PGSC0003DMG400017991 Solanum tuberosum HOM05D003777 ORTHO05D004690 1.0e-24 118.6 99 66.7
Sopen01g018820 Solanum pennellii HOM05D003777 ORTHO05D004690 1.5e-23 114.8 64 92.2
Hma1.2p1_0075F.1_g039220 Hydrangea macrophylla HOM05D003777 ORTHO05D004690 7.2e-23 112.5 74 75.7
BolC6t38947H Brassica oleracea HOM05D003777 ORTHO05D004690 2.0e-17 94.4 62 75.8
SEGI_18986 Sequoiadendron giganteum HOM05D003777 ORTHO05D000001 1.5e-12 78.2 82 47.6
MCO13G157 Micromonas commoda HOM05D003777 ORTHO05D004690 1.1e-07 62.0 165 31.5
PGSC0003DMG400024126 Solanum tuberosum HOM05D003777 ORTHO05D004690 4.3e-07 60.1 49 69.4
Aqoxy6G02120 Aquilegia oxysepala HOM05D003777 ORTHO05D004690 4.7e-06 56.6 40 67.5


User provided reference genes

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