Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400015284 Solanum tuberosum HOM05D004426 ORTHO05D005417 4.9e-174 614.4 314 100.0
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 4.2e-149 531.6 277 97.8
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 1.2e-148 530.0 277 97.5
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 1.4e-139 500.0 277 91.7
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 2.8e-137 492.3 277 89.9
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 8.2e-137 490.7 277 89.2
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 3.1e-112 409.1 278 71.6
Dinv31767 Davidia involucrata HOM05D004426 ORTHO05D005417 8.8e-107 391.0 279 71.0
Lj1A1205T55 Lonicera japonica HOM05D004426 ORTHO05D005417 2.6e-106 389.4 278 70.1
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 9.8e-106 387.5 278 69.1
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.6e-103 380.2 278 66.9
CSS0006601 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 4.5e-103 378.6 278 67.3
CSS0032246 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 4.5e-103 378.6 278 67.3
Oeu036110.1 Olea europaea HOM05D004426 ORTHO05D005417 3.8e-102 375.6 278 68.0
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 1.6e-100 370.2 278 68.0
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 3.6e-100 369.0 285 64.9
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 1.4e-99 367.1 278 66.5
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 1.8e-99 366.7 285 62.8
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 3.0e-99 365.9 280 65.0
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 6.8e-99 364.8 280 63.6
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 1.2e-98 364.0 280 64.6
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 1.5e-98 363.6 278 64.0
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 3.4e-98 362.5 280 63.9
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 4.4e-98 362.1 280 65.4
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 7.5e-98 361.3 278 63.3
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 9.8e-98 360.9 275 64.4
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 9.8e-98 360.9 279 64.2
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 2.2e-97 359.8 277 65.7
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 2.9e-97 359.4 293 62.5
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 1.8e-96 356.7 281 62.6
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 7.0e-96 354.8 280 63.6
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 9.2e-96 354.4 280 62.9
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 2.3e-94 349.7 285 62.1
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 5.0e-94 348.6 276 62.3
MD12G1041400 Malus domestica HOM05D004426 ORTHO05D005417 5.0e-94 348.6 279 62.0
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 6.6e-94 348.2 280 61.4
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 8.6e-94 347.8 280 61.1
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 2.5e-93 346.3 283 60.4
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 3.3e-93 345.9 280 61.8
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 4.3e-93 345.5 288 60.1
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 9.5e-93 344.4 288 60.4
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.2e-92 344.0 288 60.1
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.2e-92 344.0 288 60.1
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 2.8e-92 342.8 280 61.4
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 3.6e-92 342.4 283 60.1
Sc22g0002960 Simmondsia chinensis HOM05D004426 ORTHO05D005417 3.6e-92 342.4 279 58.8
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 4.7e-92 342.0 283 61.5
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 8.0e-92 341.3 279 62.0
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 1.4e-91 340.5 283 60.1
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 1.8e-91 340.1 280 61.8
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 2.3e-91 339.7 280 61.4
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 8.9e-91 337.8 280 61.4
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 1.2e-90 337.4 280 60.7
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 1.5e-90 337.0 282 63.5
Haze_20160 Corylus avellana HOM05D004426 ORTHO05D005417 2.0e-90 336.7 280 62.1
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 5.8e-90 335.1 280 60.4
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 7.5e-90 334.7 279 59.9
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 9.8e-90 334.3 280 58.2
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 1.3e-89 334.0 280 59.6
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 1.3e-89 334.0 280 59.6
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 2.2e-89 333.2 280 60.4
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 2.2e-89 333.2 278 60.8
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 2.2e-89 333.2 280 60.0
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 2.9e-89 332.8 280 61.1
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 2.9e-89 332.8 275 59.6
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 4.9e-89 332.0 276 60.9
ATR0665G194 Amborella trichopoda HOM05D004426 ORTHO05D005417 6.4e-89 331.6 280 58.9
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 1.4e-88 330.5 280 58.2
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 1.4e-88 330.5 284 59.5
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 2.4e-88 329.7 280 60.0
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 3.5e-87 325.9 280 58.9
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 1.1e-85 320.9 280 57.9
AUR62027347 Chenopodium quinoa HOM05D004426 ORTHO05D005417 5.6e-85 318.5 280 56.1
AUR62040133 Chenopodium quinoa HOM05D004426 ORTHO05D005417 1.2e-84 317.4 280 55.7
HPP92_005908 Vanilla planifolia HOM05D004426 ORTHO05D005417 2.1e-84 316.6 278 54.7
CDE04G2905 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.4e-83 313.9 280 55.4
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 6.4e-81 305.1 279 56.3
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 8.3e-81 304.7 279 55.9
SEGI_03524 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 4.1e-80 302.4 283 52.7
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 9.2e-80 301.2 279 55.6
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 1.6e-79 300.4 280 56.8
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 1.7e-78 297.0 278 53.6
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 3.0e-78 296.2 284 54.2
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 8.6e-78 294.7 266 55.6
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 5.6e-77 292.0 281 54.8
RcHm_v2.0_Chr3g0476171 Rosa chinensis HOM05D004426 ORTHO05D005417 5.6e-77 292.0 215 66.0
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 4.7e-76 288.9 281 53.4
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 6.2e-76 288.5 281 52.7
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 6.2e-76 288.5 281 52.3
Duzib093G0602 Durio zibethinus HOM05D004426 ORTHO05D005417 1.1e-75 287.7 254 56.7
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 1.1e-75 287.7 281 52.3
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 8.9e-75 284.6 281 51.6
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 1.5e-74 283.9 281 52.3
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 1.3e-73 280.8 284 51.4
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 1.3e-73 280.8 284 51.4
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 1.3e-73 280.8 284 51.4
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 1.3e-73 280.8 284 51.4
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 1.3e-73 280.8 284 51.4
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 9.3e-56 221.5 276 44.9
SHI25008 Sapria himalayana HOM05D004426 ORTHO05D000002 2.9e-49 199.9 258 44.2
Cpa.g.sc104.20 Carica papaya HOM05D004426 ORTHO05D005417 2.1e-47 193.7 157 63.7
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 7.4e-45 185.3 142 59.9
Mapoly0014s0197 Marchantia polymorpha HOM05D004426 ORTHO05D005417 4.9e-41 172.6 280 34.3
Rhsim04G0099300 Rhododendron simsii HOM05D004426 ORTHO05D005417 6.5e-41 172.2 278 38.5
AagrBONN_evm.TU.Sc2ySwM_368.1933 Anthoceros agrestis HOM05D004426 ORTHO05D005417 1.1e-35 154.8 275 34.5
Pp3c22_17700 Physcomitrium patens HOM05D004426 ORTHO05D005417 2.2e-28 130.6 255 32.2
Rhsim04G0136900 Rhododendron simsii HOM05D004426 ORTHO05D005417 3.1e-27 126.7 251 34.7
CBR_g906 Chara braunii HOM05D004426 ORTHO05D005417 1.6e-15 87.8 315 24.8
Os03g0554950 Oryza sativa ssp. japonica HOM05D004426 ORTHO05D005417 6.7e-14 82.4 86 46.5
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.3e-12 78.2 71 54.9


User provided reference genes

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