Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 2.0e-267 925.2 476 100.0
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 1.5e-243 845.9 466 93.8
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 2.3e-239 832.0 458 93.7
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 8.1e-213 743.8 492 80.3
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.5e-198 696.4 454 81.5
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.5e-187 659.8 454 78.4
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 9.5e-137 491.1 482 57.1
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 3.4e-134 482.6 468 59.0
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 1.3e-133 480.7 468 57.3
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 7.1e-132 474.9 482 55.4
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 8.6e-130 468.0 487 55.9
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 1.6e-128 463.8 470 53.2
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 2.4e-124 449.9 482 54.4
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 1.4e-119 434.1 477 52.8
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.2e-118 431.0 491 50.9
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 3.4e-118 429.5 474 51.7
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 5.4e-116 422.2 470 51.9
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 4.6e-115 419.1 473 51.6
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 7.8e-115 418.3 491 51.1
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 6.6e-114 415.2 472 50.8
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 2.5e-113 413.3 480 50.0
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 3.3e-113 412.9 472 50.2
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 4.3e-113 412.5 480 50.4
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 4.3e-113 412.5 479 51.8
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 4.0e-111 406.0 471 50.1
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 4.9e-109 399.1 471 49.3
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 2.1e-107 393.7 476 48.5
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 2.7e-107 393.3 479 47.8
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 7.9e-107 391.7 478 49.0
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 5.1e-106 389.0 475 48.0
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 4.3e-105 386.0 482 47.3
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 5.6e-105 385.6 475 47.8
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 2.8e-104 383.3 469 48.2
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 4.8e-104 382.5 481 46.4
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 3.1e-103 379.8 445 48.8
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 1.2e-102 377.9 463 47.7
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 5.8e-102 375.6 470 47.0
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 4.9e-101 372.5 466 47.6
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 1.9e-100 370.5 473 45.9
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 1.9e-100 370.5 471 48.8
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.7e-99 366.7 476 47.3
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.5e-99 366.3 474 46.8
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 7.9e-99 365.2 471 45.9
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.0e-98 364.8 479 44.1
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 1.5e-97 360.9 444 47.1
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.5e-97 360.9 467 46.7
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 2.5e-97 360.1 472 44.5
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 7.4e-97 358.6 484 45.2
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 7.4e-97 358.6 477 44.9
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 2.1e-96 357.1 487 45.6
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.3e-95 352.4 467 46.3
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 6.9e-95 352.1 483 43.7
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 3.4e-94 349.7 420 48.3
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 7.6e-94 348.6 450 45.8
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 1.7e-93 347.4 470 43.6
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 1.7e-93 347.4 474 43.9
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.7e-93 347.4 473 43.1
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 2.5e-92 343.6 466 43.6
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 4.2e-92 342.8 475 45.9
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 4.2e-92 342.8 470 44.5
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 4.2e-92 342.8 487 43.1
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 7.1e-92 342.0 483 43.1
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 9.3e-92 341.7 486 42.6
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 3.5e-91 339.7 421 48.0
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 4.6e-91 339.3 446 44.8
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 4.6e-91 339.3 470 44.3
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 1.0e-90 338.2 471 44.2
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 1.3e-90 337.8 473 42.5
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 1.8e-90 337.4 470 44.5
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 3.0e-90 336.7 484 42.6
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 5.1e-90 335.9 466 42.7
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 6.7e-90 335.5 471 45.2
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 1.5e-89 334.3 471 43.5
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 2.5e-89 333.6 489 41.5
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 3.3e-89 333.2 451 44.1
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 7.4e-89 332.0 466 42.3
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 9.7e-89 331.6 469 42.2
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 1.3e-88 331.3 477 41.9
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.3e-88 331.3 488 42.0
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.8e-88 330.1 448 45.3
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.4e-87 327.8 440 45.9
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 3.1e-87 326.6 430 44.7
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 9.0e-87 325.1 485 42.9
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 2.0e-86 323.9 483 41.4
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 2.9e-85 320.1 502 41.2
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 5.5e-84 315.8 472 41.9
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 7.9e-83 312.0 341 51.9
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 2.3e-82 310.5 474 39.9
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 4.3e-81 306.2 353 51.3
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 2.2e-80 303.9 464 40.9
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 1.1e-79 301.6 468 41.0
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 7.2e-76 288.9 467 40.0
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 1.1e-68 265.0 346 46.2
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 5.7e-65 252.7 332 44.0
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 7.4e-65 252.3 467 36.8
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 3.1e-63 246.9 310 49.0
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 4.1e-63 246.5 305 46.2
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.5e-52 210.7 335 42.4
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 3.1e-47 193.7 183 56.3
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 9.8e-33 145.6 372 32.5
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 3.5e-30 137.1 150 45.3
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.3e-28 130.2 143 46.9
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.6e-27 127.1 143 46.2
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.6e-27 127.1 143 46.2
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 4.1e-23 113.6 241 35.7
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.6e-22 111.7 118 48.3
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 2.0e-22 111.3 486 26.5
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 5.0e-21 106.7 209 35.9
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 4.3e-20 103.6 173 32.9
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 4.3e-20 103.6 173 32.9
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.6e-19 101.7 127 44.9
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.6e-19 101.7 83 67.5
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 8.9e-18 95.9 418 25.4
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 5.8e-17 93.2 141 41.8
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 6.4e-16 89.7 261 32.2
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 1.2e-14 85.5 78 55.1
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 5.6e-12 76.6 428 25.9
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.1e-10 70.9 116 37.1
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 5.2e-10 70.1 85 40.0
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 3.4e-09 67.4 117 31.6
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 5.8e-09 66.6 67 62.7
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 2.4e-07 61.2 55 50.9
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 5.4e-07 60.1 110 35.5
arahy.Tifrunner.gnm1.ann1.SUI2IU Arachis hypogaea HOM05D006143 ORTHO05D007587 9.2e-07 59.3 48 58.3
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 6.0e-06 56.6 97 35.1


User provided reference genes

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