Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006794 Solanum tuberosum HOM05D003531 ORTHO05D004354 2.9e-140 501.9 252 100.0
Sopen01g034360 Solanum pennellii HOM05D003531 ORTHO05D004354 2.5e-128 462.2 252 91.7
Solyc01g087430.3 Solanum lycopersicum HOM05D003531 ORTHO05D004354 1.7e-124 449.5 252 90.1
Sopen01g034370 Solanum pennellii HOM05D003531 ORTHO05D004354 6.4e-124 447.6 252 90.1
Solyc01g087400.4 Solanum lycopersicum HOM05D003531 ORTHO05D004354 1.5e-120 436.4 250 89.6
CAN.G219.38 Capsicum annuum HOM05D003531 ORTHO05D004354 2.1e-119 432.6 252 88.5
Sopen01g034460 Solanum pennellii HOM05D003531 ORTHO05D004354 4.7e-119 431.4 250 88.4
Nitab4.5_0008353g0020 Nicotiana tabacum HOM05D003957 ORTHO05D004833 7.8e-114 414.1 245 84.9
Nitab4.5_0002918g0090 Nicotiana tabacum HOM05D003531 ORTHO05D004833 2.3e-113 412.5 248 83.9
Solyc01g087420.4 Solanum lycopersicum HOM05D003531 ORTHO05D004354 9.3e-107 390.6 252 81.0
Peaxi162Scf00953g00513 Petunia axillaris HOM05D003531 ORTHO05D004354 1.0e-105 387.1 252 79.4
Sopen01g034350 Solanum pennellii HOM05D003531 ORTHO05D004354 7.6e-85 317.8 237 69.2
Solyc01g087320.3 Solanum lycopersicum HOM05D003531 ORTHO05D004354 3.2e-83 312.4 237 68.4
Dinv09345 Davidia involucrata HOM05D003531 ORTHO05D004354 6.1e-66 255.0 253 55.3
Dinv43430 Davidia involucrata HOM05D003531 ORTHO05D004354 3.3e-64 249.2 253 54.2
Lj9C634G4 Lonicera japonica HOM05D003531 ORTHO05D004354 1.4e-59 233.8 253 54.2
Cc02_g28130 Coffea canephora HOM05D003531 ORTHO05D004354 3.2e-59 232.6 252 54.0
vmacro21192 Vaccinium macrocarpon HOM05D003531 ORTHO05D004354 3.6e-58 229.2 251 51.4
Rhsim01G0128500 Rhododendron simsii HOM05D003531 ORTHO05D004354 4.7e-58 228.8 251 51.0
Actinidia20660 Actinidia chinensis HOM05D003531 ORTHO05D004354 2.2e-55 219.9 252 49.6
Hma1.2p1_0495F.1_g165700 Hydrangea macrophylla HOM05D003531 ORTHO05D004354 1.0e-52 211.1 251 50.2
DCAR_029680 Daucus carota HOM05D003531 ORTHO05D004354 2.9e-52 209.5 255 49.8
CSS0044266 Camellia sinensis var. sinensis HOM05D003531 ORTHO05D004354 1.6e-50 203.8 253 49.0
RcHm_v2.0_Chr1g0316671 Rosa chinensis HOM05D003531 ORTHO05D004354 4.7e-50 202.2 249 48.6
PGR031G1295 Punica granatum HOM05D003531 ORTHO05D004354 1.8e-49 200.3 255 47.5
CANSAT80G0550 Cannabis sativa HOM05D003531 ORTHO05D004354 5.2e-49 198.7 243 48.1
FAN03G2678 Fragaria x ananassa HOM05D003531 ORTHO05D004354 1.5e-48 197.2 248 46.8
Prupe.2G016600 Prunus persica HOM05D003531 ORTHO05D004354 1.3e-47 194.1 249 47.0
MSTRG.5029 Avicennia marina HOM05D003531 ORTHO05D004354 1.8e-46 190.3 264 44.7
TWI09G1532 Tripterygium wilfordii HOM05D003531 ORTHO05D004354 1.8e-46 190.3 250 45.2
TAR633G0763 Trochodendron aralioides HOM05D003531 ORTHO05D004354 5.3e-46 188.7 255 46.7
RcHm_v2.0_Chr6g0268071 Rosa chinensis HOM05D003531 ORTHO05D004354 7.0e-46 188.3 185 57.3
FAN10G4005 Fragaria x ananassa HOM05D003531 ORTHO05D004354 9.1e-46 188.0 248 46.4
FvH4_7g01200 Fragaria vesca HOM05D003531 ORTHO05D004354 1.2e-45 187.6 248 47.2
FAN06G4268 Fragaria x ananassa HOM05D003531 ORTHO05D004354 1.2e-45 187.6 248 47.2
MBI04_g44436_MAGBIO Magnolia biondii HOM05D003531 ORTHO05D004354 2.7e-45 186.4 252 44.0
QL04p008498 Quercus lobata HOM05D003531 ORTHO05D004354 2.7e-45 186.4 251 46.6
Oeu048992.1 Olea europaea HOM05D003531 ORTHO05D004354 5.9e-45 185.3 242 45.9
Eucgr.G03370 Eucalyptus grandis HOM05D003531 ORTHO05D004354 1.0e-44 184.5 242 45.9
TWI73G0346 Tripterygium wilfordii HOM05D003531 ORTHO05D004354 1.3e-44 184.1 254 44.9
FAN01G0774 Fragaria x ananassa HOM05D003531 ORTHO05D004354 2.2e-44 183.3 248 46.4
Nn2g15298 Nelumbo nucifera HOM05D003531 ORTHO05D004354 3.2e-43 179.5 243 43.2
Nn7g36242 Nelumbo nucifera HOM05D003531 ORTHO05D004354 3.2e-43 179.5 247 42.5
COL.COLO4_04865 Corchorus olitorius HOM05D003531 ORTHO05D004354 9.4e-43 177.9 245 45.7
Oeu063180.2 Olea europaea HOM05D003531 ORTHO05D004354 2.1e-42 176.8 252 43.7
Cpa.g.sc125.24 Carica papaya HOM05D003531 ORTHO05D004354 4.7e-42 175.6 234 44.0
Gohir.D08G164500 Gossypium hirsutum HOM05D003531 ORTHO05D004354 6.1e-42 175.3 251 43.8
Gorai.004G171500 Gossypium raimondii HOM05D003531 ORTHO05D004354 6.1e-42 175.3 251 43.8
Sed0002980 Sechium edule HOM05D003531 ORTHO05D004354 6.1e-42 175.3 232 47.0
MD07G1013100 Malus domestica HOM05D003531 ORTHO05D004354 8.0e-42 174.9 243 46.9
Thecc.01G409300 Theobroma cacao HOM05D003531 ORTHO05D004354 8.0e-42 174.9 245 45.3
Lj3g0024838 Lotus japonicus HOM05D003531 ORTHO05D004354 1.4e-41 174.1 242 44.6
Ciclev10030635m.g Citrus clementina HOM05D003531 ORTHO05D004354 2.3e-41 173.3 253 43.5
Glyma.09G228600 Glycine max HOM05D003531 ORTHO05D004354 2.3e-41 173.3 242 45.9
Sed0001045 Sechium edule HOM05D003531 ORTHO05D004354 2.3e-41 173.3 233 44.6
arahy.Tifrunner.gnm1.ann1.L35I2V Arachis hypogaea HOM05D003531 ORTHO05D004354 4.0e-41 172.6 242 45.9
arahy.Tifrunner.gnm1.ann1.V60VE2 Arachis hypogaea HOM05D003531 ORTHO05D004354 4.0e-41 172.6 242 45.9
Gohir.A08G143500 Gossypium hirsutum HOM05D003531 ORTHO05D004354 6.8e-41 171.8 251 43.0
Sabra09G0043900 Salix brachista HOM05D003531 ORTHO05D004354 8.8e-41 171.4 243 43.2
Sc11g0009100 Simmondsia chinensis HOM05D003531 ORTHO05D004354 8.8e-41 171.4 240 41.7
Migut.N01607 Erythranthe guttata HOM05D003531 ORTHO05D004354 1.2e-40 171.0 263 43.0
MD02G1308700 Malus domestica HOM05D003531 ORTHO05D004354 1.2e-40 171.0 242 46.7
Duzib138G1641 Durio zibethinus HOM05D003531 ORTHO05D004354 2.6e-40 169.9 246 43.9
Sabra16G0162700 Salix brachista HOM05D003531 ORTHO05D004354 4.4e-40 169.1 242 43.0
ClCG09G004050 Citrullus lanatus HOM05D003531 ORTHO05D004354 7.5e-40 168.3 242 45.5
Lj3g0012564 Lotus japonicus HOM05D003531 ORTHO05D004354 9.8e-40 167.9 242 43.8
Glyma.12G007900 Glycine max HOM05D003531 ORTHO05D004354 1.3e-39 167.5 242 44.6
Hund19803 Selenicereus undatus HOM05D003531 ORTHO05D004354 1.7e-39 167.2 240 40.4
Sc23g0005960 Simmondsia chinensis HOM05D003531 ORTHO05D004354 2.2e-39 166.8 240 40.8
arahy.Tifrunner.gnm1.ann1.T4LWN5 Arachis hypogaea HOM05D003531 ORTHO05D004354 2.8e-39 166.4 249 42.6
TPR.G3645 Trifolium pratense HOM05D003531 ORTHO05D004354 3.7e-39 166.0 242 44.6
ECA248G0343 Erigeron canadensis HOM05D003531 ORTHO05D004354 4.8e-39 165.6 164 54.9
Phvul.011G010000 Phaseolus vulgaris HOM05D003531 ORTHO05D004354 4.8e-39 165.6 242 43.8
Atru.chr11.2606 Acer truncatum HOM05D003531 ORTHO05D004354 8.3e-39 164.9 249 44.2
HanXRQChr17g0563011 Helianthus annuus HOM05D003531 ORTHO05D004354 1.4e-38 164.1 172 54.7
Potri.009G059700 Populus trichocarpa HOM05D003531 ORTHO05D004354 2.4e-38 163.3 243 43.6
VMungo1127G0476 Vigna mungo HOM05D003531 ORTHO05D004354 4.1e-38 162.5 242 43.0
CDE05G3403 Ceratophyllum demersum HOM05D003531 ORTHO05D004354 5.4e-38 162.2 150 56.7
Manes.07G007000 Manihot esculenta HOM05D003531 ORTHO05D004354 5.4e-38 162.2 251 43.0
AUR62023077 Chenopodium quinoa HOM05D003531 ORTHO05D004354 7.0e-38 161.8 185 47.0
MBI02_g05670_MAGBIO Magnolia biondii HOM05D003531 ORTHO05D004354 7.0e-38 161.8 151 53.6
arahy.Tifrunner.gnm1.ann1.2BQ2P0 Arachis hypogaea HOM05D003531 ORTHO05D004354 9.1e-38 161.4 249 42.6
CsaV3_7G030950 Cucumis sativus L. HOM05D003531 ORTHO05D004354 1.2e-37 161.0 218 46.3
Gohir.A08G028300 Gossypium hirsutum HOM05D003531 ORTHO05D004354 1.2e-37 161.0 245 43.7
Potri.001G264800 Populus trichocarpa HOM05D003531 ORTHO05D004354 1.2e-37 161.0 243 41.6
AUR62009395 Chenopodium quinoa HOM05D003531 ORTHO05D004354 1.6e-37 160.6 185 46.5
Ca_19577_v3 Cicer arietinum L. HOM05D003531 ORTHO05D004354 2.0e-37 160.2 243 42.8
Potri.009G059500 Populus trichocarpa HOM05D003531 ORTHO05D004354 2.0e-37 160.2 243 43.2
CDE05G0662 Ceratophyllum demersum HOM05D003531 ORTHO05D004354 4.5e-37 159.1 242 41.3
AUR62043479 Chenopodium quinoa HOM05D003531 ORTHO05D004354 4.5e-37 159.1 150 54.7
MELO3C023561.2 Cucumis melo HOM05D003531 ORTHO05D004354 5.9e-37 158.7 244 43.9
Solyc01g087360.3 Solanum lycopersicum HOM05D003531 ORTHO05D004354 2.3e-36 156.8 239 41.8
Psat0s1245g0040 Pisum sativum HOM05D003531 ORTHO05D004354 2.9e-36 156.4 251 41.8
Gohir.D08G039066 Gossypium hirsutum HOM05D003531 ORTHO05D004354 6.6e-36 155.2 245 42.0
Sopen01g034440 Solanum pennellii HOM05D003531 ORTHO05D004354 6.6e-36 155.2 239 41.8
Manes.10G140700 Manihot esculenta HOM05D003531 ORTHO05D004354 2.5e-35 153.3 237 43.5
Gorai.004G037700 Gossypium raimondii HOM05D003531 ORTHO05D004354 5.5e-35 152.1 245 41.6
Lalb_Chr19g0140301 Lupinus albus HOM05D003531 ORTHO05D004354 9.5e-35 151.4 242 41.3
EL10Ac2g04341 Beta vulgaris HOM05D003531 ORTHO05D004354 2.1e-34 150.2 234 39.3
Haze_03181 Corylus avellana HOM05D003531 ORTHO05D004354 3.6e-34 149.4 230 43.5
Lalb_Chr01g0000391 Lupinus albus HOM05D003531 ORTHO05D004354 8.0e-34 148.3 242 40.9
HanXRQChr09g0251321 Helianthus annuus HOM05D003531 ORTHO05D004354 3.0e-33 146.4 143 55.9
Aqoxy2G00174 Aquilegia oxysepala HOM05D003531 ORTHO05D004354 4.0e-33 146.0 258 38.4
HPP92_009589 Vanilla planifolia HOM05D003531 ORTHO05D004354 4.0e-33 146.0 255 37.3
ECA234G4456 Erigeron canadensis HOM05D003531 ORTHO05D004354 5.2e-33 145.6 209 43.1
Lsat_1_v5_gn_4_31500 Lactuca sativa HOM05D003531 ORTHO05D004354 6.8e-33 145.2 150 53.3
Hund21485 Selenicereus undatus HOM05D003531 ORTHO05D004354 8.9e-33 144.8 241 39.0
PSO339G4096 Papaver somniferum HOM05D003531 ORTHO05D004354 4.4e-32 142.5 152 50.7
PSO384G4091 Papaver somniferum HOM05D003531 ORTHO05D004354 5.7e-32 142.1 150 52.7
Medtr4g037745 Medicago truncatula HOM05D003531 ORTHO05D004354 9.8e-32 141.4 261 40.6
Lalb_Chr25g0282961 Lupinus albus HOM05D003531 ORTHO05D004354 2.8e-31 139.8 242 38.0
unitig_8.g3623 Utricularia gibba HOM05D003531 ORTHO05D004354 4.9e-31 139.0 263 39.9
Aa31LG10G7170 Aethionema arabicum HOM05D003531 ORTHO05D004354 1.1e-30 137.9 188 45.7
CiPaw.14G001000 Carya illinoinensis HOM05D003531 ORTHO05D004354 1.4e-30 137.5 241 40.2
ATR0332G091 Amborella trichopoda HOM05D003531 ORTHO05D004354 1.8e-30 137.1 155 49.0
Carub.0005s1842 Capsella rubella HOM05D003531 ORTHO05D004354 4.5e-29 132.5 251 40.6
THA.LOC104827429 Tarenaya hassleriana HOM05D003531 ORTHO05D004354 1.7e-28 130.6 167 44.9
SGA_v2.0_scaffold24G10668 Striga asiatica HOM05D003531 ORTHO05D004354 2.3e-28 130.2 237 39.2
Thhalv10010234m.g Eutrema salsugineum HOM05D003531 ORTHO05D004354 5.0e-28 129.0 148 51.4
BcaB01g00446 Brassica carinata HOM05D003531 ORTHO05D004354 1.1e-27 127.9 257 40.1
BolC8t50353H Brassica oleracea HOM05D003531 ORTHO05D004354 2.5e-27 126.7 192 45.3
BcaNung06091 Brassica carinata HOM05D003531 ORTHO05D004354 3.3e-27 126.3 191 45.0
C08p27360 Brassica napus HOM05D003531 ORTHO05D004354 3.3e-27 126.3 191 45.0
Carub.0003s0760 Capsella rubella HOM05D003531 ORTHO05D004354 4.3e-27 125.9 223 38.6
Lsat_1_v5_gn_1_106281 Lactuca sativa HOM05D003531 ORTHO05D004354 5.6e-27 125.6 152 48.0
CARHR161810 Cardamine hirsuta HOM05D003531 ORTHO05D004354 7.3e-27 125.2 159 47.2
AL3G19400 Arabidopsis lyrata HOM05D003531 ORTHO05D004354 9.5e-27 124.8 223 38.1
AL5G32650 Arabidopsis lyrata HOM05D003531 ORTHO05D004354 9.5e-27 124.8 151 51.0
A09p45150 Brassica napus HOM05D003531 ORTHO05D004354 9.5e-27 124.8 192 43.8
BraA09t39978Z Brassica rapa HOM05D003531 ORTHO05D004354 9.5e-27 124.8 192 43.8
Sp5g10200 Schrenkiella parvula HOM05D003531 ORTHO05D004354 9.5e-27 124.8 145 51.0
AT3G08020 Arabidopsis thaliana HOM05D003531 ORTHO05D004354 2.1e-26 123.6 224 38.8
BolC1t05508H Brassica oleracea HOM05D003531 ORTHO05D004354 2.1e-26 123.6 213 39.4
CARHR082750 Cardamine hirsuta HOM05D003531 ORTHO05D004354 6.1e-26 122.1 225 37.3
BcaC09g47972 Brassica carinata HOM05D003531 ORTHO05D004354 1.0e-25 121.3 151 47.7
Thhalv10020119m.g Eutrema salsugineum HOM05D003531 ORTHO05D004354 1.8e-25 120.6 238 37.0
Aa31LG5G18570 Aethionema arabicum HOM05D002263 ORTHO05D003537 6.8e-25 118.6 222 39.2
Sp3g06930 Schrenkiella parvula HOM05D003531 ORTHO05D004354 1.2e-24 117.9 168 44.0
BraA01t04348Z Brassica rapa HOM05D003531 ORTHO05D004354 4.4e-24 115.9 213 39.0
Os12g0527800 Oryza sativa ssp. japonica HOM05D003531 ORTHO05D004354 9.8e-24 114.8 165 41.2
Zm00001eb410840 Zea mays HOM05D003531 ORTHO05D004354 1.3e-23 114.4 146 45.2
unitig_699.g19826 Utricularia gibba HOM05D003531 ORTHO05D004354 2.2e-23 113.6 201 40.3
A03p48680 Brassica napus HOM05D003531 ORTHO05D004354 2.9e-23 113.2 149 47.7
CiPaw.13G006400 Carya illinoinensis HOM05D003531 ORTHO05D004354 6.4e-23 112.1 198 40.9
Zm00001eb137800 Zea mays HOM05D003531 ORTHO05D004354 1.1e-22 111.3 146 45.9
TAR369G0698 Trochodendron aralioides HOM05D003531 ORTHO05D004354 1.9e-22 110.5 88 59.1
BcaC06g33381 Brassica carinata HOM05D003531 ORTHO05D004354 2.4e-22 110.2 147 47.6
C07p46790 Brassica napus HOM05D003531 ORTHO05D004354 2.4e-22 110.2 147 47.6
BolC7t45196H Brassica oleracea HOM05D003531 ORTHO05D004354 2.4e-22 110.2 147 47.6
GSVIVG01032130001 Vitis vinifera HOM05D003531 ORTHO05D004354 3.0e-20 103.2 72 65.3
BraA03t13971Z Brassica rapa HOM05D003531 ORTHO05D004354 1.9e-19 100.5 142 45.8
AT3G52100 Arabidopsis thaliana HOM05D003531 ORTHO05D004354 5.2e-17 92.4 107 49.5
BcaC06g33024 Brassica carinata HOM05D003531 ORTHO05D004354 1.6e-13 80.9 250 32.4
Mapoly0014s0141 Marchantia polymorpha HOM05D003531 ORTHO05D004354 2.1e-10 70.5 245 28.6
SMO203G0227 Selaginella moellendorffii HOM05D003531 ORTHO05D004354 2.3e-09 67.0 164 32.3
Pp3c8_14490 Physcomitrium patens HOM05D003531 ORTHO05D004354 2.9e-07 60.1 166 32.5


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