Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400002302 Solanum tuberosum HOM05D004198 ORTHO05D015220 3.5e-112 408.3 205 100.0
Sopen07g006460 Solanum pennellii HOM05D004198 ORTHO05D006470 3.8e-98 361.7 205 90.2
Solyc07g017610.3 Solanum lycopersicum HOM05D004198 ORTHO05D006470 1.4e-97 359.8 205 89.8
Nitab4.5_0000055g0100 Nicotiana tabacum HOM05D004198 ORTHO05D006470 1.7e-95 352.8 205 86.8
Nitab4.5_0001114g0030 Nicotiana tabacum HOM05D004198 ORTHO05D006470 2.4e-92 342.4 205 84.9
Peaxi162Scf00452g00120 Petunia axillaris HOM05D004198 ORTHO05D006470 5.8e-91 337.8 205 81.5
PGSC0003DMG402015935 Solanum tuberosum HOM05D004198 ORTHO05D006470 8.4e-90 334.0 187 90.9
CAN.G86.10 Capsicum annuum HOM05D004198 ORTHO05D006470 1.6e-85 319.7 191 83.8
QL11p003422 Quercus lobata HOM05D004198 ORTHO05D006470 1.1e-68 263.8 204 66.7
Cfa002929 Carpinus fangiana HOM05D004198 ORTHO05D006470 6.9e-68 261.2 206 66.5
CSS0027728 Camellia sinensis var. sinensis HOM05D004198 ORTHO05D006470 5.8e-67 258.1 204 65.2
TAR624G1053 Trochodendron aralioides HOM05D004198 ORTHO05D006470 8.4e-66 254.2 208 66.3
Sabra06G0105400 Salix brachista HOM05D004198 ORTHO05D006470 3.2e-65 252.3 206 61.2
CiPaw.03G199300 Carya illinoinensis HOM05D004198 ORTHO05D006470 7.1e-65 251.1 206 64.6
Migut.J00870 Erythranthe guttata HOM05D004198 ORTHO05D006470 1.6e-64 250.0 207 63.8
TWI63G0842 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 2.1e-64 249.6 206 62.1
Actinidia39606 Actinidia chinensis HOM05D004198 ORTHO05D006470 4.6e-64 248.4 206 63.6
Lj4C923T7 Lonicera japonica HOM05D004198 ORTHO05D006470 6.0e-64 248.1 208 63.0
Potri.006G134300 Populus trichocarpa HOM05D004198 ORTHO05D006470 6.0e-64 248.1 206 61.7
Ciclev10007313m.g Citrus clementina HOM05D004198 ORTHO05D006470 1.0e-63 247.3 202 61.9
Manes.16G088900 Manihot esculenta HOM05D004198 ORTHO05D006470 1.8e-63 246.5 206 61.7
SalBow6G6057 Salvia bowleyana HOM05D004198 ORTHO05D006470 1.8e-63 246.5 206 60.2
Cc00_g13780 Coffea canephora HOM05D004198 ORTHO05D015220 2.3e-63 246.1 206 64.1
Duzib150G0139 Durio zibethinus HOM05D004198 ORTHO05D006470 3.0e-63 245.7 206 63.1
Atru.chr7.1797 Acer truncatum HOM05D004198 ORTHO05D006470 3.9e-63 245.4 206 61.7
MSTRG.5977 Avicennia marina HOM05D004198 ORTHO05D006470 8.7e-63 244.2 206 60.7
Thecc.09G068000 Theobroma cacao HOM05D004198 ORTHO05D006470 8.7e-63 244.2 206 61.2
CsaV3_1G041440 Cucumis sativus L. HOM05D004198 ORTHO05D006470 1.1e-62 243.8 205 63.4
Hma1.2p1_0179F.1_g079100 Hydrangea macrophylla HOM05D004198 ORTHO05D006470 2.5e-62 242.7 206 61.7
Rhsim05G0001300 Rhododendron simsii HOM05D004198 ORTHO05D006470 3.3e-62 242.3 206 62.1
CANSAT56G1757 Cannabis sativa HOM05D004198 ORTHO05D006470 9.6e-62 240.7 209 63.6
ClCG03G014720 Citrullus lanatus HOM05D004198 ORTHO05D006470 9.6e-62 240.7 205 62.4
Ca_21348_v3 Cicer arietinum L. HOM05D004198 ORTHO05D006470 1.3e-61 240.4 206 60.2
Hund08916 Selenicereus undatus HOM05D004198 ORTHO05D006470 1.3e-61 240.4 206 57.8
vmacro17070 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 2.1e-61 239.6 206 61.7
DCAR_011904 Daucus carota HOM05D004198 ORTHO05D006470 3.7e-61 238.8 206 60.2
Prupe.7G189800 Prunus persica HOM05D004198 ORTHO05D006470 3.7e-61 238.8 205 58.0
Duzib168G0708 Durio zibethinus HOM05D004198 ORTHO05D006470 6.3e-61 238.0 206 59.7
Lj4g0026986 Lotus japonicus HOM05D004198 ORTHO05D006470 6.3e-61 238.0 205 59.0
MD02G1105300 Malus domestica HOM05D004198 ORTHO05D006470 8.2e-61 237.7 205 59.0
arahy.Tifrunner.gnm1.ann1.Q7P4IG Arachis hypogaea HOM05D004198 ORTHO05D006470 1.4e-60 236.9 206 59.2
Lalb_Chr12g0200381 Lupinus albus HOM05D004198 ORTHO05D006470 1.8e-60 236.5 206 60.2
Gohir.D06G081400 Gossypium hirsutum HOM05D004198 ORTHO05D006470 2.4e-60 236.1 206 59.7
GSVIVG01014998001 Vitis vinifera HOM05D004198 ORTHO05D006470 2.4e-60 236.1 206 62.1
arahy.Tifrunner.gnm1.ann1.54PPAU Arachis hypogaea HOM05D004198 ORTHO05D006470 3.1e-60 235.7 206 58.7
AUR62025328 Chenopodium quinoa HOM05D004198 ORTHO05D006470 3.1e-60 235.7 206 59.2
Medtr4g124470 Medicago truncatula HOM05D004198 ORTHO05D006470 3.1e-60 235.7 206 59.7
PGR044G0871 Punica granatum HOM05D004198 ORTHO05D006470 3.1e-60 235.7 207 59.9
Gorai.010G094700 Gossypium raimondii HOM05D004198 ORTHO05D006470 4.1e-60 235.3 206 59.7
MELO3C015556.2 Cucumis melo HOM05D004198 ORTHO05D006470 5.3e-60 235.0 205 61.5
TPR.G12649 Trifolium pratense HOM05D004198 ORTHO05D006470 5.3e-60 235.0 206 60.2
MD02G1105000 Malus domestica HOM05D004198 ORTHO05D006470 6.9e-60 234.6 205 58.5
ECA240G2250 Erigeron canadensis HOM05D004198 ORTHO05D006470 9.0e-60 234.2 206 59.7
Gohir.A06G082000 Gossypium hirsutum HOM05D004198 ORTHO05D006470 1.2e-59 233.8 206 59.7
EL10Ac8g18953 Beta vulgaris HOM05D004198 ORTHO05D006470 1.5e-59 233.4 206 59.2
Glyma.13G115500 Glycine max HOM05D004198 ORTHO05D006470 1.5e-59 233.4 206 59.7
HanXRQChr03g0060011 Helianthus annuus HOM05D004198 ORTHO05D006470 5.9e-59 231.5 210 59.0
Nn8g38508 Nelumbo nucifera HOM05D004198 ORTHO05D006470 7.6e-59 231.1 207 58.5
Oeu021231.1 Olea europaea HOM05D004198 ORTHO05D006470 1.3e-58 230.3 193 61.1
RcHm_v2.0_Chr2g0096481 Rosa chinensis HOM05D004198 ORTHO05D006470 5.0e-58 228.4 206 57.3
VMungo1215G1653 Vigna mungo HOM05D004198 ORTHO05D006470 5.0e-58 228.4 206 58.7
Aqoxy7G04190 Aquilegia oxysepala HOM05D004198 ORTHO05D006470 6.5e-58 228.0 206 59.2
Phvul.003G126300 Phaseolus vulgaris HOM05D004198 ORTHO05D006470 6.5e-58 228.0 206 58.7
Cpa.g.sc82.44 Carica papaya HOM05D004198 ORTHO05D006470 1.4e-57 226.9 205 57.1
AUR62028335 Chenopodium quinoa HOM05D004198 ORTHO05D006470 3.2e-57 225.7 206 58.7
FvH4_1g09640 Fragaria vesca HOM05D004198 ORTHO05D006470 5.5e-57 224.9 206 56.3
FAN19G0627 Fragaria x ananassa HOM05D004198 ORTHO05D006470 5.5e-57 224.9 206 56.3
FAN26G2565 Fragaria x ananassa HOM05D004198 ORTHO05D006470 5.5e-57 224.9 206 56.3
PSO135G0314 Papaver somniferum HOM05D004198 ORTHO05D006470 7.2e-57 224.6 206 59.2
PSO724G0393 Papaver somniferum HOM05D004198 ORTHO05D006470 1.2e-56 223.8 206 58.7
FAN28G0237 Fragaria x ananassa HOM05D004198 ORTHO05D006470 2.1e-56 223.0 206 54.9
Lsat_1_v5_gn_5_138341 Lactuca sativa HOM05D004198 ORTHO05D006470 2.1e-56 223.0 203 59.1
Sed0024058 Sechium edule HOM05D004198 ORTHO05D006470 2.1e-56 223.0 209 57.9
MBI13_g01654_MAGBIO Magnolia biondii HOM05D004198 ORTHO05D006470 1.3e-55 220.3 212 56.6
Eucgr.C03183 Eucalyptus grandis HOM05D004198 ORTHO05D006470 1.8e-55 219.9 190 60.0
unitig_22.g6576 Utricularia gibba HOM05D004198 ORTHO05D006470 8.7e-55 217.6 205 54.6
Sc14g0000910 Simmondsia chinensis HOM05D004198 ORTHO05D006470 4.3e-54 215.3 204 53.4
Glyma.17G044300 Glycine max HOM05D004198 ORTHO05D006470 7.4e-54 214.5 190 58.9
Os02g0783700 Oryza sativa ssp. japonica HOM05D004198 ORTHO05D006470 8.2e-53 211.1 212 52.8
Zm00001eb192910 Zea mays HOM05D004198 ORTHO05D006470 6.9e-52 208.0 210 52.4
THA.LOC104804447 Tarenaya hassleriana HOM05D004198 ORTHO05D006470 2.6e-51 206.1 206 54.4
AL7G18400 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 1.0e-50 204.1 206 54.9
Sp7g30900 Schrenkiella parvula HOM05D004198 ORTHO05D006470 1.7e-50 203.4 207 54.1
Carub.0007s0730 Capsella rubella HOM05D004198 ORTHO05D006470 3.8e-50 202.2 206 54.4
Thhalv10024287m.g Eutrema salsugineum HOM05D004198 ORTHO05D006470 5.0e-50 201.8 206 53.9
AT4G33150 Arabidopsis thaliana HOM05D004198 ORTHO05D006470 1.1e-49 200.7 206 53.9
HPP92_009326 Vanilla planifolia HOM05D004198 ORTHO05D006470 1.9e-49 199.9 210 52.4
BcaC09g52122 Brassica carinata HOM05D004198 ORTHO05D006470 3.2e-49 199.1 207 53.6
C01p05470 Brassica napus HOM05D004198 ORTHO05D006470 4.2e-49 198.7 206 53.9
BolC1t00527H Brassica oleracea HOM05D004198 ORTHO05D006470 5.5e-49 198.4 206 53.4
ATR0099G092 Amborella trichopoda HOM05D004198 ORTHO05D006470 2.1e-48 196.4 213 49.8
Aa31sc786G10 Aethionema arabicum HOM05D004198 ORTHO05D006470 4.6e-48 195.3 206 53.9
SEGI_08338 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 5.0e-42 175.3 219 47.0
A01p05020 Brassica napus HOM05D004198 ORTHO05D006470 8.5e-42 174.5 208 49.0
BraA01t00484Z Brassica rapa HOM05D004198 ORTHO05D006470 1.6e-40 170.2 206 48.5
vmacro12815 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 2.3e-39 166.4 287 40.1
COL.COLO4_21183 Corchorus olitorius HOM05D004198 ORTHO05D006470 3.9e-39 165.6 132 64.4
Zm00001eb257190 Zea mays HOM05D004198 ORTHO05D030652 7.7e-35 151.4 163 49.7
Prupe.6G271300 Prunus persica HOM05D004198 ORTHO05D015220 1.4e-31 140.6 110 63.6
Solyc07g017675.1 Solanum lycopersicum HOM05D004198 ORTHO05D015220 1.4e-31 140.6 89 77.5
Sopen07g006500 Solanum pennellii HOM05D004198 ORTHO05D015220 3.0e-31 139.4 85 81.2
CDE05G0275 Ceratophyllum demersum HOM05D004198 ORTHO05D015220 4.4e-30 135.6 105 64.8
Dinv25493 Davidia involucrata HOM05D004198 ORTHO05D006470 4.4e-30 135.6 111 64.9
Pp3c27_7000 Physcomitrium patens HOM05D004198 ORTHO05D006470 7.5e-30 134.8 221 39.4
SMO145G0289 Selaginella moellendorffii HOM05D004198 ORTHO05D006470 1.1e-28 131.0 210 37.1
Mapoly0072s0092 Marchantia polymorpha HOM05D004198 ORTHO05D006470 1.4e-28 130.6 160 43.8
Prupe.6G271400 Prunus persica HOM05D004198 ORTHO05D015220 1.9e-25 120.2 97 61.9
SGA_v2.0_scaffold31G12701 Striga asiatica HOM05D004198 ORTHO05D006470 7.2e-25 118.2 111 54.1
Actinidia33514 Actinidia chinensis HOM05D004198 ORTHO05D015220 5.9e-11 72.0 78 52.6
Zm00001eb129630 Zea mays HOM05D004198 ORTHO05D015220 6.6e-10 68.6 53 67.9
Zm00001eb048040 Zea mays HOM05D004198 ORTHO05D015220 9.8e-06 54.7 44 63.6


User provided reference genes

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