Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3202 Punica granatum HOM05D005082 ORTHO05D006474 1.1e-63 246.5 124 100.0
PGR004G1860 Punica granatum HOM05D005082 ORTHO05D006474 1.0e-61 240.0 124 97.6
PGR042G3506 Punica granatum HOM05D005082 ORTHO05D006474 1.5e-57 226.1 124 91.9
Eucgr.H05005 Eucalyptus grandis HOM05D005082 ORTHO05D006474 4.8e-48 194.5 124 75.0
Thecc.02G148100 Theobroma cacao HOM05D005082 ORTHO05D006474 9.0e-47 190.3 124 74.2
Duzib132G0508 Durio zibethinus HOM05D005082 ORTHO05D006474 1.3e-45 186.4 124 72.6
Cfa005396 Carpinus fangiana HOM05D005082 ORTHO05D006474 1.7e-45 186.0 124 74.2
Duzib248G1564 Durio zibethinus HOM05D005082 ORTHO05D006474 1.7e-45 186.0 124 70.2
Gohir.A01G011600 Gossypium hirsutum HOM05D005082 ORTHO05D006474 6.5e-45 184.1 124 70.2
QL11p056821 Quercus lobata HOM05D005082 ORTHO05D006474 1.1e-44 183.3 123 72.4
MD10G1011800 Malus domestica HOM05D005082 ORTHO05D006474 1.9e-44 182.6 124 71.0
CiPaw.05G095000 Carya illinoinensis HOM05D005082 ORTHO05D006474 3.2e-44 181.8 124 71.0
Gohir.D01G012800 Gossypium hirsutum HOM05D005082 ORTHO05D006474 9.4e-44 180.3 124 68.5
Gorai.002G014600 Gossypium raimondii HOM05D005082 ORTHO05D006474 1.2e-43 179.9 121 70.2
MD05G1011800 Malus domestica HOM05D005082 ORTHO05D006474 1.6e-43 179.5 124 67.7
COL.COLO4_03850 Corchorus olitorius HOM05D005082 ORTHO05D006474 2.1e-43 179.1 124 69.4
GSVIVG01023855001 Vitis vinifera HOM05D005082 ORTHO05D006474 2.7e-43 178.7 119 72.3
Glyma.03G097900 Glycine max HOM05D005082 ORTHO05D006474 4.6e-43 177.9 119 71.4
VMungo0331G1808 Vigna mungo HOM05D005082 ORTHO05D006474 1.0e-42 176.8 121 68.6
Ciclev10028098m.g Citrus clementina HOM05D005082 ORTHO05D006474 1.4e-42 176.4 124 67.7
RcHm_v2.0_Chr6g0277491 Rosa chinensis HOM05D005082 ORTHO05D006474 1.4e-42 176.4 124 67.7
Dinv14185 Davidia involucrata HOM05D005082 ORTHO05D006474 1.8e-42 176.0 122 68.0
Phvul.010G038400 Phaseolus vulgaris HOM05D005082 ORTHO05D006474 1.8e-42 176.0 119 68.9
CSS0018221 Camellia sinensis var. sinensis HOM05D005082 ORTHO05D006474 2.3e-42 175.6 119 71.4
SalBow1G4726 Salvia bowleyana HOM05D005082 ORTHO05D006474 3.0e-42 175.3 119 69.7
TWI59G1375 Tripterygium wilfordii HOM05D005082 ORTHO05D006474 5.1e-42 174.5 121 71.1
TAR628G0288 Trochodendron aralioides HOM05D005082 ORTHO05D006474 5.1e-42 174.5 113 70.8
MBI01_g28404_MAGBIO Magnolia biondii HOM05D005082 ORTHO05D006474 6.7e-42 174.1 122 69.7
arahy.Tifrunner.gnm1.ann1.44ERQ5 Arachis hypogaea HOM05D005082 ORTHO05D006474 1.1e-41 173.3 124 64.5
Prupe.8G016800 Prunus persica HOM05D005082 ORTHO05D006474 1.1e-41 173.3 124 66.1
MSTRG.16959 Avicennia marina HOM05D005082 ORTHO05D006474 2.0e-41 172.6 121 68.6
Oeu006114.1 Olea europaea HOM05D005082 ORTHO05D006474 2.5e-41 172.2 122 65.6
ATR0605G166 Amborella trichopoda HOM05D005082 ORTHO05D006474 3.3e-41 171.8 122 68.9
Cc09_g10910 Coffea canephora HOM05D005082 ORTHO05D006474 3.3e-41 171.8 121 66.1
arahy.Tifrunner.gnm1.ann1.M18VWQ Arachis hypogaea HOM05D005082 ORTHO05D006474 7.4e-41 170.6 124 63.7
CDE06G2564 Ceratophyllum demersum HOM05D005082 ORTHO05D006474 9.7e-41 170.2 113 69.9
AUR62010207 Chenopodium quinoa HOM05D005082 ORTHO05D006474 9.7e-41 170.2 120 67.5
Potri.009G169700 Populus trichocarpa HOM05D005082 ORTHO05D006474 9.7e-41 170.2 119 66.4
Cpa.g.c29182.1 Carica papaya HOM05D005082 ORTHO05D006474 1.7e-40 169.5 113 69.9
Sabra04G0140300 Salix brachista HOM05D005082 ORTHO05D006474 2.8e-40 168.7 119 66.4
CsaV3_7G002150 Cucumis sativus L. HOM05D005082 ORTHO05D006474 3.7e-40 168.3 122 66.4
AUR62013197 Chenopodium quinoa HOM05D005082 ORTHO05D006474 4.8e-40 167.9 120 66.7
FAN20G1299 Fragaria x ananassa HOM05D005082 ORTHO05D006474 4.8e-40 167.9 120 65.8
Hund06352 Selenicereus undatus HOM05D005082 ORTHO05D006474 4.8e-40 167.9 120 67.5
Manes.02G091600 Manihot esculenta HOM05D005082 ORTHO05D006474 6.3e-40 167.5 124 66.1
Migut.B00003 Erythranthe guttata HOM05D005082 ORTHO05D006474 8.2e-40 167.2 113 73.5
FAN15G2332 Fragaria x ananassa HOM05D005082 ORTHO05D006474 8.2e-40 167.2 120 65.8
FAN24G2999 Fragaria x ananassa HOM05D005082 ORTHO05D006474 8.2e-40 167.2 120 65.8
FAN27G0598 Fragaria x ananassa HOM05D005082 ORTHO05D006474 8.2e-40 167.2 120 66.7
Lj5C170T16 Lonicera japonica HOM05D005082 ORTHO05D006474 1.1e-39 166.8 122 65.6
SGA_v2.0_scaffold5G02667 Striga asiatica HOM05D005082 ORTHO05D006474 1.4e-39 166.4 109 71.6
ClCG02G003240 Citrullus lanatus HOM05D005082 ORTHO05D006474 1.8e-39 166.0 122 66.4
Glyma.07G124000 Glycine max HOM05D005082 ORTHO05D006474 1.8e-39 166.0 118 65.3
Lj3g0023171 Lotus japonicus HOM05D005082 ORTHO05D006474 1.8e-39 166.0 121 62.8
PSO210G0895 Papaver somniferum HOM05D005082 ORTHO05D006474 2.4e-39 165.6 125 65.6
MELO3C015693.2 Cucumis melo HOM05D005082 ORTHO05D006474 5.3e-39 164.5 122 64.8
Ca_25889_v3 Cicer arietinum L. HOM05D005082 ORTHO05D006474 6.9e-39 164.1 121 61.2
PSO675G0919 Papaver somniferum HOM05D005082 ORTHO05D006474 6.9e-39 164.1 125 64.8
Sed0020521 Sechium edule HOM05D005082 ORTHO05D006474 6.9e-39 164.1 122 64.8
Atru.BG.54.p Acer truncatum HOM05D005082 ORTHO05D006474 9.1e-39 163.7 112 67.0
AL8G41310 Arabidopsis lyrata HOM05D005082 ORTHO05D006474 9.1e-39 163.7 124 62.1
AT5G64050 Arabidopsis thaliana HOM05D005082 ORTHO05D006474 9.1e-39 163.7 124 62.1
EL10Ac9g21557 Beta vulgaris HOM05D005082 ORTHO05D006474 9.1e-39 163.7 116 66.4
Lalb_Chr12g0210191 Lupinus albus HOM05D005082 ORTHO05D006474 1.2e-38 163.3 122 64.8
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 1.5e-38 162.9 116 66.4
vmacro16288 Vaccinium macrocarpon HOM05D005082 ORTHO05D006474 1.5e-38 162.9 124 63.7
HanXRQChr14g0455171 Helianthus annuus HOM05D005082 ORTHO05D006474 3.4e-38 161.8 113 66.4
Aa31LG1G17860 Aethionema arabicum HOM05D005082 ORTHO05D006474 4.5e-38 161.4 119 62.2
Ah.01g017700 Amaranthus hybridus HOM05D005082 ORTHO05D006474 7.7e-38 160.6 122 61.5
CARHR277960 Cardamine hirsuta HOM05D005082 ORTHO05D006474 2.9e-37 158.7 124 62.1
Rhsim04G0008200 Rhododendron simsii HOM05D005082 ORTHO05D006474 3.8e-37 158.3 121 62.8
TPR.G17355 Trifolium pratense HOM05D005082 ORTHO05D006474 3.8e-37 158.3 121 58.7
Aqoxy6G02995 Aquilegia oxysepala HOM05D005082 ORTHO05D006474 5.0e-37 157.9 122 63.9
BcaB02g09792 Brassica carinata HOM05D005082 ORTHO05D006474 6.5e-37 157.5 122 59.8
Lalb_Chr07g0194811 Lupinus albus HOM05D005082 ORTHO05D006474 8.5e-37 157.1 121 62.0
THA.LOC104800058 Tarenaya hassleriana HOM05D005082 ORTHO05D006474 8.5e-37 157.1 109 67.9
Thhalv10003868m.g Eutrema salsugineum HOM05D005082 ORTHO05D006474 1.1e-36 156.8 122 59.0
Zm00001eb208250 Zea mays HOM05D005082 ORTHO05D006474 1.1e-36 156.8 119 61.3
Actinidia20586 Actinidia chinensis HOM05D005082 ORTHO05D006474 1.4e-36 156.4 123 60.2
A06p30760 Brassica napus HOM05D005082 ORTHO05D006474 2.5e-36 155.6 122 59.8
BraA06t26018Z Brassica rapa HOM05D005082 ORTHO05D006474 2.5e-36 155.6 122 59.8
Carub.0008s2483 Capsella rubella HOM05D005082 ORTHO05D006474 2.5e-36 155.6 124 59.7
Os02g0121000 Oryza sativa ssp. japonica HOM05D005082 ORTHO05D006474 4.2e-36 154.8 119 61.3
Sp2g27120 Schrenkiella parvula HOM05D005082 ORTHO05D006474 4.2e-36 154.8 114 62.3
Nitab4.5_0010601g0010 Nicotiana tabacum HOM05D005082 ORTHO05D006474 5.5e-36 154.5 113 65.5
BcaC01g02661 Brassica carinata HOM05D005082 ORTHO05D006474 9.4e-36 153.7 122 59.0
C03p62220 Brassica napus HOM05D005082 ORTHO05D006474 9.4e-36 153.7 122 59.0
Nitab4.5_0001220g0040 Nicotiana tabacum HOM05D005082 ORTHO05D006474 1.6e-35 152.9 113 64.6
Zm00001eb230310 Zea mays HOM05D005082 ORTHO05D006474 1.6e-35 152.9 122 61.5
Medtr8g009900 Medicago truncatula HOM05D005082 ORTHO05D006474 2.1e-35 152.5 120 57.5
BolC3t18485H Brassica oleracea HOM05D005082 ORTHO05D006474 4.7e-35 151.4 122 58.2
DCAR_006224 Daucus carota HOM05D005082 ORTHO05D006474 4.7e-35 151.4 112 63.4
Dinv41859 Davidia involucrata HOM05D005082 ORTHO05D006474 6.1e-35 151.0 97 74.2
ECA233G3220 Erigeron canadensis HOM05D005082 ORTHO05D006474 6.1e-35 151.0 113 63.7
Solyc01g112290.4 Solanum lycopersicum HOM05D005082 ORTHO05D006474 7.9e-35 150.6 113 63.7
Sopen01g054400 Solanum pennellii HOM05D005082 ORTHO05D006474 7.9e-35 150.6 113 63.7
DCAR_001519 Daucus carota HOM05D005082 ORTHO05D006474 5.1e-34 147.9 118 58.5
Lj9C409G6 Lonicera japonica HOM05D005082 ORTHO05D006474 6.7e-34 147.5 99 72.7
Peaxi162Scf00362g00137 Petunia axillaris HOM05D005082 ORTHO05D006474 1.1e-33 146.7 113 62.8
CAN.G1645.8 Capsicum annuum HOM05D005082 ORTHO05D006474 1.5e-33 146.4 113 61.1
Lsat_1_v5_gn_8_119500 Lactuca sativa HOM05D005082 ORTHO05D006474 2.6e-33 145.6 114 59.6
SEGI_01300 Sequoiadendron giganteum HOM05D005082 ORTHO05D006474 1.7e-29 132.9 104 60.6
SGA_v2.0_scaffold104G30258 Striga asiatica HOM05D005082 ORTHO05D006474 2.1e-27 125.9 104 60.6
Mapoly0005s0181 Marchantia polymorpha HOM05D005082 ORTHO05D006474 3.3e-25 118.6 110 47.3
Psat6g037120 Pisum sativum HOM05D005082 ORTHO05D006474 3.3e-25 118.6 85 64.7
AagrBONN_evm.TU.Sc2ySwM_117.3203 Anthoceros agrestis HOM05D005082 ORTHO05D006474 5.7e-25 117.9 121 43.0
Psat4g215760 Pisum sativum HOM05D005082 ORTHO05D006474 5.7e-25 117.9 85 64.7
SMO134G0063 Selaginella moellendorffii HOM05D005082 ORTHO05D006474 2.8e-24 115.5 120 47.5
Pp3c1_10010 Physcomitrium patens HOM05D005082 ORTHO05D006474 2.9e-21 105.5 125 40.0
CBR_g25940 Chara braunii HOM05D005082 ORTHO05D006474 1.2e-19 100.1 123 43.1
Nitab4.5_0005317g0010 Nicotiana tabacum HOM05D005082 ORTHO05D006474 4.7e-19 98.2 66 77.3
Haze_01956 Corylus avellana HOM05D005082 ORTHO05D006474 6.1e-19 97.8 124 46.0
Aa31LG6G3290 Aethionema arabicum HOM05D005082 ORTHO05D006474 6.8e-18 94.4 58 79.3
Cre07.g313700 Chlamydomonas reinhardtii HOM05D005082 ORTHO05D006474 3.5e-14 82.0 101 36.6
Sc08g0002050 Simmondsia chinensis HOM05D005082 ORTHO05D006474 8.5e-13 77.4 47 70.2
FAN04G1942 Fragaria x ananassa HOM05D005082 ORTHO05D006474 1.0e-10 70.5 113 36.3
PRCOL_00001874 Prasinoderma coloniale HOM05D005082 ORTHO05D006474 3.0e-10 68.9 100 36.0
Pp3c2_37890 Physcomitrium patens HOM05D005082 ORTHO05D006474 3.7e-08 62.0 90 38.9
MCO11G616 Micromonas commoda HOM05D005082 ORTHO05D006474 1.6e-06 56.6 79 35.4


User provided reference genes

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