Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR142G3151 Punica granatum HOM05D000319 ORTHO05D336444 2.0e-141 505.8 250 100.0
Psat4g028040 Pisum sativum HOM05D000319 ORTHO05D000903 1.2e-08 64.7 111 32.4
SGA_v2.0_scaffold428G51519 Striga asiatica HOM05D000319 ORTHO05D000903 1.5e-08 64.3 151 29.1
Duzib211G0471 Durio zibethinus HOM05D000319 ORTHO05D000903 2.0e-08 63.9 151 27.8
Duzib138G0518 Durio zibethinus HOM05D000319 ORTHO05D000903 2.6e-08 63.5 151 27.2
Ca_21532_v3 Cicer arietinum L. HOM05D000319 ORTHO05D000903 3.4e-08 63.2 111 31.5
Medtr4g119413 Medicago truncatula HOM05D000319 ORTHO05D000903 3.4e-08 63.2 111 31.5
CSS0026292 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D000903 9.8e-08 61.6 111 31.5
Lalb_Chr12g0196521 Lupinus albus HOM05D000319 ORTHO05D000903 9.8e-08 61.6 111 32.4
Actinidia00040 Actinidia chinensis HOM05D000319 ORTHO05D000903 1.3e-07 61.2 111 32.4
CSS0025504 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D000903 1.3e-07 61.2 111 31.5
COL.COLO4_13896 Corchorus olitorius HOM05D000319 ORTHO05D000903 1.3e-07 61.2 111 31.5
arahy.Tifrunner.gnm1.ann1.A4TJW4 Arachis hypogaea HOM05D000319 ORTHO05D000903 1.7e-07 60.8 111 32.4
arahy.Tifrunner.gnm1.ann1.C5NHEB Arachis hypogaea HOM05D000319 ORTHO05D000903 1.7e-07 60.8 111 32.4
MSTRG.10084 Avicennia marina HOM05D000319 ORTHO05D000903 1.7e-07 60.8 111 31.5
CAN.G556.9 Capsicum annuum HOM05D000319 ORTHO05D000903 1.7e-07 60.8 151 28.5
Duzib211G0021 Durio zibethinus HOM05D000319 ORTHO05D000903 1.7e-07 60.8 108 32.4
Lj6g0024853 Lotus japonicus HOM05D000319 ORTHO05D000903 1.7e-07 60.8 111 31.5
Lalb_Chr07g0177651 Lupinus albus HOM05D000319 ORTHO05D000903 1.7e-07 60.8 111 32.4
SGA_v2.0_scaffold86G26892 Striga asiatica HOM05D000319 ORTHO05D000903 1.7e-07 60.8 111 31.5
THA.LOC104815935 Tarenaya hassleriana HOM05D000319 ORTHO05D000903 1.7e-07 60.8 111 30.6
TAR633G1636 Trochodendron aralioides HOM05D000319 ORTHO05D000903 1.7e-07 60.8 111 31.5
GSVIVG01017738001 Vitis vinifera HOM05D000319 ORTHO05D000903 1.7e-07 60.8 111 31.5
ClCG06G005250 Citrullus lanatus HOM05D000319 ORTHO05D000903 2.2e-07 60.5 111 31.5
MELO3C021345.2 Cucumis melo HOM05D000319 ORTHO05D000903 2.2e-07 60.5 111 31.5
CsaV3_6G017300 Cucumis sativus L. HOM05D000319 ORTHO05D000903 2.2e-07 60.5 111 31.5
Duzib151G0035 Durio zibethinus HOM05D000319 ORTHO05D000903 2.2e-07 60.5 111 31.5
vmacro02488 Vaccinium macrocarpon HOM05D000319 ORTHO05D000903 2.2e-07 60.5 113 32.7
Dinv38301 Davidia involucrata HOM05D000319 ORTHO05D000903 2.8e-07 60.1 111 31.5
Nitab4.5_0003256g0030 Nicotiana tabacum HOM05D000319 ORTHO05D000903 2.8e-07 60.1 111 31.5
Nitab4.5_0005595g0010 Nicotiana tabacum HOM05D000319 ORTHO05D000903 2.8e-07 60.1 111 31.5
Oeu021107.1 Olea europaea HOM05D000319 ORTHO05D000903 2.8e-07 60.1 111 31.5
Oeu023293.3 Olea europaea HOM05D000319 ORTHO05D000903 2.8e-07 60.1 111 32.4
Sed0015748 Sechium edule HOM05D000319 ORTHO05D000903 2.8e-07 60.1 111 31.5
CANSAT78G1438 Cannabis sativa HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
Dinv44395 Davidia involucrata HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
Glyma.09G046500 Glycine max HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
Glyma.15G154000 Glycine max HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
Glyma.17G025200 Glycine max HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
Lalb_Chr20g0114481 Lupinus albus HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
Manes.03G193200 Manihot esculenta HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
Manes.15G013800 Manihot esculenta HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
Phvul.009G246300 Phaseolus vulgaris HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
Potri.008G217300 Populus trichocarpa HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
PGR031G1855 Punica granatum HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 30.6
Sabra08G0154600 Salix brachista HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
SalBow2G1315 Salvia bowleyana HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
Solyc01g067100.4 Solanum lycopersicum HOM05D000319 ORTHO05D000903 3.7e-07 59.7 151 28.5
Sopen01g028890 Solanum pennellii HOM05D000319 ORTHO05D000903 3.7e-07 59.7 151 28.5
SGA_v2.0_scaffold57G20224 Striga asiatica HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 30.6
VMungo1309G1220 Vigna mungo HOM05D000319 ORTHO05D000903 3.7e-07 59.7 111 31.5
DCAR_027084 Daucus carota HOM05D000319 ORTHO05D000903 4.9e-07 59.3 111 31.5
Gohir.A09G062400 Gossypium hirsutum HOM05D000319 ORTHO05D000903 4.9e-07 59.3 111 31.5
Gohir.D09G061300 Gossypium hirsutum HOM05D000319 ORTHO05D000903 4.9e-07 59.3 111 31.5
Gohir.D10G169400 Gossypium hirsutum HOM05D000319 ORTHO05D000903 4.9e-07 59.3 111 31.5
Gorai.006G075900 Gossypium raimondii HOM05D000319 ORTHO05D000903 4.9e-07 59.3 111 31.5
Gorai.011G188900 Gossypium raimondii HOM05D000319 ORTHO05D000903 4.9e-07 59.3 111 31.5
CSS0003266 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D000903 6.3e-07 58.9 111 31.5
CSS0007353 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D000903 6.3e-07 58.9 111 31.5
CSS0022272 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D000903 6.3e-07 58.9 111 31.5
CiPaw.02G084200 Carya illinoinensis HOM05D000319 ORTHO05D000903 6.3e-07 58.9 151 27.2
MD13G1170300 Malus domestica HOM05D000319 ORTHO05D000903 6.3e-07 58.9 111 31.5
Potri.010G023800 Populus trichocarpa HOM05D000319 ORTHO05D000903 6.3e-07 58.9 111 31.5
Prupe.1G138700 Prunus persica HOM05D000319 ORTHO05D000903 6.3e-07 58.9 111 31.5
RcHm_v2.0_Chr4g0421701 Rosa chinensis HOM05D000319 ORTHO05D000903 6.3e-07 58.9 111 31.5
TWI73G0907 Tripterygium wilfordii HOM05D000319 ORTHO05D000903 6.3e-07 58.9 111 32.4
Aa31LG5G2200 Aethionema arabicum HOM05D000319 ORTHO05D000903 8.3e-07 58.5 113 30.1
arahy.Tifrunner.gnm1.ann1.18U4K7 Arachis hypogaea HOM05D000319 ORTHO05D000903 8.3e-07 58.5 111 31.5
arahy.Tifrunner.gnm1.ann1.D3FQJ1 Arachis hypogaea HOM05D000319 ORTHO05D000903 8.3e-07 58.5 111 31.5
Carub.0006s3457 Capsella rubella HOM05D000319 ORTHO05D000903 8.3e-07 58.5 111 30.6
MELO3C006647.2 Cucumis melo HOM05D000319 ORTHO05D000903 8.3e-07 58.5 111 32.4
Peaxi162Scf00386g00004 Petunia axillaris HOM05D000319 ORTHO05D000903 8.3e-07 58.5 111 31.5
QL06p008427 Quercus lobata HOM05D000319 ORTHO05D000903 8.3e-07 58.5 111 30.6
Rhsim02G0011800 Rhododendron simsii HOM05D000319 ORTHO05D000903 8.3e-07 58.5 111 31.5
AL6G50480 Arabidopsis lyrata HOM05D000319 ORTHO05D000903 1.1e-06 58.2 111 30.6
BcaC04g23998 Brassica carinata HOM05D000319 ORTHO05D000903 1.1e-06 58.2 111 30.6
A09p02000 Brassica napus HOM05D000319 ORTHO05D000903 1.1e-06 58.2 111 30.6
C09p02100 Brassica napus HOM05D000319 ORTHO05D000903 1.1e-06 58.2 111 30.6
BolC9t53139H Brassica oleracea HOM05D000319 ORTHO05D000903 1.1e-06 58.2 111 30.6
BraA09t35850Z Brassica rapa HOM05D000319 ORTHO05D000903 1.1e-06 58.2 111 30.6
CARHR250860 Cardamine hirsuta HOM05D000319 ORTHO05D000903 1.1e-06 58.2 111 30.6
DCAR_024561 Daucus carota HOM05D000319 ORTHO05D000903 1.1e-06 58.2 151 27.8
Eucgr.H03886 Eucalyptus grandis HOM05D000319 ORTHO05D000903 1.1e-06 58.2 111 31.5
Thecc.04G282500 Theobroma cacao HOM05D000319 ORTHO05D000903 1.1e-06 58.2 108 32.4
CiPaw.01G150100 Carya illinoinensis HOM05D000319 ORTHO05D000903 1.4e-06 57.8 111 31.5
CsaV3_3G014450 Cucumis sativus L. HOM05D000319 ORTHO05D000903 1.4e-06 57.8 111 32.4
Eucgr.B01285 Eucalyptus grandis HOM05D000319 ORTHO05D000903 1.4e-06 57.8 111 31.5
Gohir.A10G163000 Gossypium hirsutum HOM05D000319 ORTHO05D000903 1.4e-06 57.8 111 31.5
Hma1.2p1_0078F.1_g040680 Hydrangea macrophylla HOM05D000319 ORTHO05D000903 1.4e-06 57.8 111 30.6
THA.LOC104801259 Tarenaya hassleriana HOM05D000319 ORTHO05D000903 1.4e-06 57.8 136 28.7
Atru.chr4.2808 Acer truncatum HOM05D000319 ORTHO05D000903 1.8e-06 57.4 111 30.6
Aqoxy2G03046 Aquilegia oxysepala HOM05D000319 ORTHO05D000903 1.8e-06 57.4 111 29.7
AT4G02570 Arabidopsis thaliana HOM05D000319 ORTHO05D000903 1.8e-06 57.4 111 30.6
MSTRG.21800 Avicennia marina HOM05D000319 ORTHO05D000903 1.8e-06 57.4 108 32.4
MD16G1171700 Malus domestica HOM05D000319 ORTHO05D000903 1.8e-06 57.4 111 31.5
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 2.4e-06 57.0 111 30.6
Lalb_Chr13g0303721 Lupinus albus HOM05D000319 ORTHO05D000903 2.4e-06 57.0 111 31.5
Sabra10G0015100 Salix brachista HOM05D000319 ORTHO05D000903 2.4e-06 57.0 111 30.6
Cfa015371 Carpinus fangiana HOM05D000319 ORTHO05D000903 3.1e-06 56.6 111 29.7
Haze_01230 Corylus avellana HOM05D000319 ORTHO05D000903 3.1e-06 56.6 111 29.7
Glyma.03G211400 Glycine max HOM05D000319 ORTHO05D000903 3.1e-06 56.6 151 27.2
Lsat_1_v5_gn_3_24140 Lactuca sativa HOM05D000319 ORTHO05D000903 5.4e-06 55.8 79 36.7
Medtr4g119930 Medicago truncatula HOM05D000319 ORTHO05D000903 5.4e-06 55.8 108 30.6
RcHm_v2.0_Chr7g0204411 Rosa chinensis HOM05D000319 ORTHO05D000903 5.4e-06 55.8 112 30.4
TWI09G0531 Tripterygium wilfordii HOM05D000319 ORTHO05D000903 5.4e-06 55.8 111 30.6
arahy.Tifrunner.gnm1.ann1.LN6NXX Arachis hypogaea HOM05D000319 ORTHO05D000903 7.0e-06 55.5 151 25.8
arahy.Tifrunner.gnm1.ann1.RGHX4L Arachis hypogaea HOM05D000319 ORTHO05D000903 7.0e-06 55.5 151 25.8
BcaC01g06747 Brassica carinata HOM05D000319 ORTHO05D000903 7.0e-06 55.5 111 29.7
A03p30990 Brassica napus HOM05D000319 ORTHO05D000903 7.0e-06 55.5 111 29.7
C03p37760 Brassica napus HOM05D000319 ORTHO05D005616 7.0e-06 55.5 111 29.7
BolC3t16067H Brassica oleracea HOM05D000319 ORTHO05D000903 7.0e-06 55.5 111 29.7
BraA03t12276Z Brassica rapa HOM05D000319 ORTHO05D000903 7.0e-06 55.5 111 29.7
CiPaw.07G103500 Carya illinoinensis HOM05D000319 ORTHO05D000903 7.0e-06 55.5 111 28.8
Duzib151G0191 Durio zibethinus HOM05D000319 ORTHO05D000903 7.0e-06 55.5 110 31.8
QL06p008391 Quercus lobata HOM05D000319 ORTHO05D000903 9.2e-06 55.1 151 25.8
Hund16707 Selenicereus undatus HOM05D000319 ORTHO05D000903 9.2e-06 55.1 120 30.0


User provided reference genes

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