Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 4.0e-41 171.4 113 100.0
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 7.0e-30 134.0 113 77.9
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 3.5e-29 131.7 112 77.7
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 7.8e-29 130.6 113 77.9
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.0e-28 130.2 112 76.8
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 1.0e-28 130.2 113 74.3
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.0e-28 130.2 113 79.6
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 5.0e-28 127.9 113 77.9
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 6.6e-28 127.5 113 67.3
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 6.6e-28 127.5 110 80.0
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 8.6e-28 127.1 114 78.1
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 8.6e-28 127.1 114 78.1
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 1.1e-27 126.7 113 75.2
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 2.5e-27 125.6 113 73.5
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 4.3e-27 124.8 111 78.4
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 5.6e-27 124.4 109 76.1
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 7.3e-27 124.0 113 63.7
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 7.3e-27 124.0 112 72.3
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 1.2e-26 123.2 112 60.7
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.1e-26 122.5 116 74.1
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 2.8e-26 122.1 113 57.5
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 6.1e-26 120.9 112 74.1
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 6.1e-26 120.9 113 66.4
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 6.1e-26 120.9 112 71.4
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 8.0e-26 120.6 112 71.4
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 8.0e-26 120.6 112 69.6
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 8.0e-26 120.6 112 73.2
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 1.0e-25 120.2 113 73.5
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 1.4e-25 119.8 113 66.4
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.4e-25 119.8 115 73.0
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.8e-25 119.4 113 76.1
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.8e-25 119.4 113 76.1
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 2.3e-25 119.0 113 68.1
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.3e-25 119.0 113 63.7
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 3.0e-25 118.6 113 55.8
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 3.0e-25 118.6 113 70.8
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 3.0e-25 118.6 113 70.8
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 3.0e-25 118.6 113 70.8
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 4.0e-25 118.2 109 70.6
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 4.0e-25 118.2 111 75.7
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 4.0e-25 118.2 113 71.7
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 4.0e-25 118.2 113 72.6
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 5.2e-25 117.9 113 55.8
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 5.2e-25 117.9 113 72.6
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 5.2e-25 117.9 112 54.5
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 5.2e-25 117.9 113 77.0
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 5.2e-25 117.9 112 54.5
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 6.8e-25 117.5 113 69.0
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 6.8e-25 117.5 111 69.4
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 8.9e-25 117.1 112 68.8
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 8.9e-25 117.1 115 75.7
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 2.0e-24 115.9 110 62.7
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 2.6e-24 115.5 111 55.9
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 2.6e-24 115.5 112 66.1
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 2.6e-24 115.5 114 72.8
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 3.4e-24 115.2 123 69.1
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 3.4e-24 115.2 113 71.7
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 3.4e-24 115.2 112 75.9
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 3.4e-24 115.2 112 56.2
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 3.4e-24 115.2 113 73.5
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 5.7e-24 114.4 110 67.3
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 7.5e-24 114.0 112 75.9
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 9.8e-24 113.6 113 68.1
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 1.3e-23 113.2 113 71.7
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 3.7e-23 111.7 113 70.8
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 4.9e-23 111.3 113 68.1
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 4.9e-23 111.3 107 67.3
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 6.4e-23 110.9 112 54.5
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 6.4e-23 110.9 109 56.9
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 1.4e-22 109.8 113 68.1
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.8e-22 109.4 113 69.9
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 4.1e-22 108.2 115 54.8
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 4.1e-22 108.2 107 69.2
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 5.4e-22 107.8 113 68.1
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 5.4e-22 107.8 112 71.4
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 5.4e-22 107.8 114 69.3
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 9.2e-22 107.1 111 73.0
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 1.6e-21 106.3 110 64.5
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 4.6e-21 104.8 113 69.0
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 1.0e-20 103.6 116 62.9
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 1.0e-20 103.6 111 49.5
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 2.3e-20 102.4 113 46.0
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 3.9e-20 101.7 115 67.8
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 6.6e-20 100.9 112 51.8
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.5e-19 99.8 95 56.8
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 5.6e-19 97.8 110 50.0
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 9.5e-19 97.1 88 77.3
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 1.6e-18 96.3 107 61.7
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 2.8e-18 95.5 116 66.4
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 3.6e-18 95.1 111 66.7
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 8.0e-18 94.0 116 66.4
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 8.0e-18 94.0 114 66.7
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 1.4e-17 93.2 83 72.3
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 2.3e-17 92.4 113 50.4
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 5.2e-17 91.3 82 58.5
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 1.5e-16 89.7 115 65.2
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 3.4e-16 88.6 87 71.3
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 3.4e-16 88.6 111 69.4
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 1.3e-15 86.7 112 66.1
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 1.3e-15 86.7 112 66.1
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 3.7e-15 85.1 84 67.9
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 3.7e-15 85.1 113 62.8
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 3.7e-15 85.1 88 52.3
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 1.1e-14 83.6 87 51.7
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 1.4e-14 83.2 115 62.6
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 1.4e-14 83.2 87 72.4
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 3.2e-14 82.0 88 59.1
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 4.1e-14 81.6 50 80.0
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 4.1e-14 81.6 89 70.8
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 7.0e-14 80.9 108 52.8
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 2.0e-13 79.3 50 74.0
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 4.6e-13 78.2 88 45.5
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 6.0e-13 77.8 84 47.6
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 6.0e-13 77.8 101 64.4
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 7.8e-13 77.4 86 46.5
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 7.8e-13 77.4 48 77.1
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 1.0e-12 77.0 111 61.3
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 3.0e-12 75.5 86 46.5
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 5.0e-12 74.7 84 70.2
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 8.6e-12 73.9 106 42.5
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 1.1e-11 73.6 104 40.4
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 4.3e-11 71.6 103 62.1
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 2.1e-10 69.3 96 63.5
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 2.8e-10 68.9 88 44.3
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.8e-10 68.9 89 46.1
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 6.2e-10 67.8 73 46.6
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 3.1e-09 65.5 118 51.7
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 3.1e-09 65.5 113 36.3
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 2.6e-08 62.4 82 63.4
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 7.5e-08 60.8 86 37.2
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 4.9e-07 58.2 88 68.2
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 1.9e-06 56.2 57 49.1
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 3.2e-06 55.5 60 46.7


User provided reference genes

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