Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 0.0e+00 1374.8 686 100.0
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 0.0e+00 1107.0 651 82.9
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 1.2e-310 1069.3 691 77.4
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 4.3e-308 1060.8 691 77.0
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 1.1e-306 1056.2 690 76.4
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.4e-303 1045.8 690 76.5
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 1.9e-303 1045.4 694 75.9
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 5.1e-301 1037.3 689 74.7
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 6.7e-301 1036.9 689 75.0
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 3.7e-299 1031.2 690 75.5
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 3.1e-298 1028.1 690 74.1
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 2.6e-297 1025.0 698 73.9
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 1.0e-296 1023.1 683 73.6
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 5.0e-296 1020.8 698 74.2
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 6.5e-296 1020.4 690 72.9
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 1.1e-295 1019.6 691 74.8
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 1.9e-295 1018.8 693 74.9
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 7.2e-295 1016.9 692 74.7
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 3.0e-293 1011.5 664 75.8
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 9.7e-292 1006.5 685 73.6
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 1.3e-291 1006.1 690 73.0
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 1.3e-291 1006.1 687 73.4
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 1.7e-291 1005.7 629 76.6
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 4.8e-291 1004.2 695 72.7
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 7.0e-290 1000.3 686 71.1
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 4.5e-289 997.7 689 73.0
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 4.5e-289 997.7 688 74.0
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 5.9e-289 997.3 686 73.6
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.8e-288 994.6 686 70.8
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.1e-287 993.0 686 72.2
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 3.2e-287 991.5 690 73.2
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.2e-287 991.1 686 71.3
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 2.1e-286 988.8 688 72.7
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 2.1e-286 988.8 692 72.7
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 2.7e-286 988.4 692 71.7
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 2.7e-286 988.4 686 70.3
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 2.6e-284 981.9 691 71.8
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 5.7e-284 980.7 696 70.5
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.7e-283 979.2 686 70.0
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 2.4e-282 975.3 696 68.4
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 2.4e-282 975.3 693 71.0
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 2.4e-282 975.3 686 70.7
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 4.5e-281 971.1 686 71.1
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 5.9e-281 970.7 680 71.2
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 7.7e-281 970.3 685 71.4
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 2.2e-280 968.8 692 71.7
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 2.9e-280 968.4 678 71.1
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 2.9e-280 968.4 678 72.0
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 2.9e-280 968.4 700 71.1
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 6.5e-280 967.2 678 70.9
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 8.5e-280 966.8 640 73.9
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 8.5e-280 966.8 689 71.7
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 1.9e-279 965.7 678 70.8
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 2.5e-279 965.3 695 69.1
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 3.2e-279 964.9 678 70.6
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 4.2e-279 964.5 694 71.2
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 1.6e-278 962.6 678 70.5
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 2.1e-278 962.2 635 74.2
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 2.7e-278 961.8 678 70.6
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 6.1e-278 960.7 641 75.4
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 8.0e-278 960.3 704 70.9
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 8.0e-278 960.3 704 70.5
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 1.8e-277 959.1 635 73.4
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 6.8e-277 957.2 678 70.5
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 2.0e-276 955.7 677 70.5
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 1.3e-275 953.0 695 68.6
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 4.8e-275 951.0 684 69.9
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 9.1e-274 946.8 696 69.1
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 1.6e-273 946.0 696 69.3
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 8.5e-272 940.3 713 68.2
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 9.4e-271 936.8 669 71.3
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.2e-270 936.4 669 70.9
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 2.1e-270 935.6 640 70.9
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 8.0e-270 933.7 620 71.0
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 1.5e-268 929.5 641 71.3
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 4.9e-267 924.5 695 67.3
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 3.3e-263 911.8 681 68.0
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 1.2e-262 909.8 637 68.8
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 3.0e-261 905.2 654 68.8
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 4.0e-261 904.8 620 68.9
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 8.3e-259 897.1 565 78.9
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 2.2e-251 872.5 672 67.3
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 2.9e-251 872.1 572 71.2
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 2.3e-248 862.4 700 64.3
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 6.6e-248 860.9 782 59.5
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 1.1e-245 853.6 566 75.3
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 7.5e-244 847.4 566 75.4
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.1e-242 843.6 687 62.2
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.6e-238 829.7 565 70.3
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 9.2e-234 813.9 768 55.9
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 1.7e-232 809.7 612 63.9
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 2.8e-230 802.4 690 61.0
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 1.7e-219 766.5 474 80.8
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 1.6e-217 760.0 554 68.8
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 9.6e-207 724.2 606 59.1
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 5.1e-192 675.2 788 48.9
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 3.8e-163 579.3 439 65.4
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 3.7e-150 536.2 384 71.1
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 8.6e-147 525.0 422 60.4
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 4.4e-127 459.5 524 47.7
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 6.4e-118 429.1 355 63.9
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 1.1e-117 428.3 636 41.0
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.8e-104 384.4 277 67.9
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.1e-99 366.3 329 56.8
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.1e-99 366.3 329 56.8
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 5.8e-95 352.8 289 61.9
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 2.0e-87 327.8 555 36.9
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 3.9e-83 313.5 235 68.9
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 4.5e-79 300.1 228 60.5
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 7.9e-68 262.7 566 31.6
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 3.8e-54 217.2 251 52.6
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 2.6e-50 204.5 255 45.5
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.1e-40 172.6 152 62.5
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 2.0e-39 168.3 181 47.5
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 4.9e-33 147.1 142 54.2
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 3.8e-30 137.5 124 53.2
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 1.3e-09 69.3 322 26.1
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 2.1e-07 62.0 166 27.1


User provided reference genes

Program Settings