Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 3.3e-175 618.2 308 100.0
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 3.3e-167 591.7 308 95.5
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 1.3e-91 340.5 226 71.2
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 1.5e-90 337.0 225 72.4
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 3.3e-90 335.9 231 70.1
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 4.3e-90 335.5 226 71.2
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 5.6e-90 335.1 221 73.3
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 1.3e-89 334.0 226 70.8
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 1.3e-89 334.0 221 73.3
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 2.1e-89 333.2 231 69.7
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 1.4e-88 330.5 221 71.5
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 2.4e-88 329.7 231 71.0
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 4.0e-88 328.9 224 68.8
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 2.6e-87 326.2 224 70.1
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 4.5e-87 325.5 225 69.3
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 5.8e-87 325.1 224 69.2
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 7.6e-87 324.7 230 71.3
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 1.3e-86 323.9 226 71.2
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 1.3e-86 323.9 226 69.9
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 3.8e-86 322.4 231 67.5
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 4.9e-86 322.0 224 69.2
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 4.9e-86 322.0 224 69.2
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 6.5e-86 321.6 224 71.4
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 8.4e-86 321.2 242 67.8
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 3.2e-85 319.3 229 68.6
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 4.2e-85 318.9 231 67.1
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 4.2e-85 318.9 229 68.6
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 4.2e-85 318.9 225 68.4
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 7.1e-85 318.2 226 67.7
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 9.3e-85 317.8 231 68.4
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 1.2e-84 317.4 224 67.9
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 1.2e-84 317.4 226 67.3
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 1.2e-84 317.4 224 67.9
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 2.1e-84 316.6 226 67.3
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 4.6e-84 315.5 226 66.8
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 1.0e-83 314.3 225 67.6
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 2.3e-83 313.2 225 68.0
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 3.9e-83 312.4 225 65.8
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 6.7e-83 311.6 225 68.9
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 1.1e-82 310.8 225 67.1
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 1.5e-82 310.5 224 66.5
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 1.9e-82 310.1 236 65.3
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 1.9e-82 310.1 224 68.8
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 1.9e-82 310.1 224 68.8
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 3.3e-82 309.3 225 65.8
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 3.3e-82 309.3 225 66.2
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 1.3e-81 307.4 226 65.0
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 3.7e-81 305.8 221 67.0
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 4.8e-81 305.4 224 67.4
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 4.8e-81 305.4 224 65.6
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 4.8e-81 305.4 225 65.8
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 1.4e-80 303.9 232 66.4
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 3.1e-80 302.8 221 67.0
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 3.1e-80 302.8 225 65.3
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 6.9e-80 301.6 225 67.1
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 1.2e-79 300.8 225 67.6
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 1.2e-79 300.8 224 66.5
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 1.5e-79 300.4 227 61.7
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 1.3e-78 297.4 225 64.9
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 1.3e-78 297.4 235 64.3
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 1.7e-78 297.0 225 61.3
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 2.2e-78 296.6 227 61.7
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 5.0e-78 295.4 225 65.8
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 6.5e-78 295.0 225 64.4
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 1.1e-77 294.3 226 65.0
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 1.9e-77 293.5 225 64.4
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 2.5e-77 293.1 225 64.9
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 4.2e-77 292.4 226 65.5
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 4.2e-77 292.4 279 55.6
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 5.5e-77 292.0 224 64.7
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 7.2e-77 291.6 223 62.8
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 9.4e-77 291.2 224 64.7
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 1.2e-76 290.8 212 68.9
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 6.1e-76 288.5 236 63.6
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 1.8e-75 287.0 221 62.4
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.3e-73 280.8 262 58.0
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 3.7e-73 279.3 226 61.5
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 4.8e-73 278.9 219 63.9
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 6.3e-73 278.5 226 61.5
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 1.5e-71 273.9 221 61.5
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 2.0e-71 273.5 210 63.8
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 3.4e-71 272.7 221 62.0
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 1.3e-70 270.8 222 63.1
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 1.3e-70 270.8 224 62.1
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 6.5e-70 268.5 226 59.3
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 4.2e-69 265.8 226 60.6
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 7.9e-68 261.5 242 55.0
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 1.7e-65 253.8 211 61.6
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 1.7e-65 253.8 211 61.6
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 8.2e-65 251.5 207 62.3
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 1.8e-64 250.4 215 60.9
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 3.1e-64 249.6 180 67.2
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 7.7e-63 245.0 202 61.9
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 6.5e-62 241.9 176 63.1
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 3.2e-61 239.6 177 64.4
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.4e-59 234.2 210 59.5
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 2.3e-59 233.4 197 57.9
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 2.3e-59 233.4 159 72.3
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 2.3e-59 233.4 279 50.9
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 8.8e-59 231.5 211 59.2
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 8.8e-59 231.5 264 50.0
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 7.4e-58 228.4 232 52.2
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 1.7e-57 227.3 155 68.4
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 5.9e-55 218.8 183 59.0
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 6.7e-51 205.3 169 58.0
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 1.1e-48 198.0 229 50.2
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 1.1e-48 198.0 132 67.4
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 2.2e-46 190.3 224 49.6
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 1.6e-44 184.1 162 61.1
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 3.1e-40 169.9 121 69.4
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 7.0e-40 168.7 172 53.5
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 8.6e-38 161.8 123 65.0
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 1.6e-36 157.5 146 56.8
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 1.0e-35 154.8 123 65.9
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 3.7e-33 146.4 131 57.3
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 5.9e-31 139.0 218 34.9
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 8.9e-27 125.2 221 31.7
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 1.7e-22 110.9 110 50.0
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 1.2e-18 98.2 66 69.7
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 1.4e-16 91.3 79 57.0
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 2.9e-09 67.0 43 74.4
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 2.9e-09 67.0 87 41.4


User provided reference genes

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