Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 0.0e+00 1145.2 604 100.0
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 7.6e-256 887.1 604 75.5
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 6.9e-233 810.8 604 67.7
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 4.0e-225 785.0 604 66.1
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 3.4e-224 781.9 604 66.1
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 2.5e-222 775.8 605 65.6
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 2.5e-219 765.8 604 65.2
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 2.2e-218 762.7 605 64.3
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 2.4e-217 759.2 604 63.9
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 7.6e-216 754.2 604 63.2
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 1.4e-214 750.0 619 62.7
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 1.9e-214 749.6 609 63.9
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 1.2e-213 746.9 604 63.1
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 3.6e-213 745.3 611 61.9
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 7.9e-213 744.2 605 64.3
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 6.9e-209 731.1 606 61.7
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 6.5e-207 724.5 602 61.5
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 7.9e-205 717.6 603 62.5
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 1.1e-203 713.8 606 60.6
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 4.4e-203 711.8 613 61.5
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 9.7e-203 710.7 597 60.8
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 2.2e-202 709.5 602 60.5
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 4.8e-202 708.4 604 60.3
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 4.8e-202 708.4 604 59.8
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 6.3e-202 708.0 606 62.9
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.8e-201 706.4 604 59.8
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 2.6e-200 702.6 599 61.4
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 1.0e-199 700.7 605 59.2
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 2.9e-199 699.1 604 59.1
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 6.5e-199 698.0 604 59.3
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 1.1e-198 697.2 569 63.6
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 5.5e-198 694.9 600 60.2
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 5.5e-198 694.9 604 58.9
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 1.2e-197 693.7 601 59.2
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 2.1e-197 693.0 576 61.8
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 2.7e-197 692.6 601 61.1
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 3.6e-197 692.2 556 63.7
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 4.7e-197 691.8 636 57.5
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 4.7e-197 691.8 605 59.0
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 2.3e-196 689.5 738 52.2
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 3.0e-196 689.1 601 60.7
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 2.6e-195 686.0 607 59.3
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.7e-194 683.3 624 58.7
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 4.8e-194 681.8 606 59.7
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 8.2e-194 681.0 606 59.9
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 7.0e-193 677.9 605 59.3
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 2.6e-192 676.0 596 61.2
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 2.6e-192 676.0 606 58.6
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 4.5e-192 675.2 606 59.2
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 5.9e-192 674.9 606 57.8
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 5.5e-190 668.3 600 59.2
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 5.5e-190 668.3 606 57.4
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 7.2e-190 667.9 610 59.5
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 9.4e-190 667.5 604 57.5
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 9.4e-190 667.5 601 57.9
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 2.1e-189 666.4 600 57.5
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 8.0e-189 664.5 606 58.3
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 1.4e-188 663.7 606 57.3
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 1.4e-188 663.7 600 57.8
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 4.0e-188 662.1 613 59.2
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 5.2e-188 661.8 723 50.5
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 5.2e-188 661.8 603 57.2
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 5.7e-187 658.3 600 58.0
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 9.7e-187 657.5 584 59.2
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 2.2e-186 656.4 632 54.7
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 2.8e-186 656.0 593 58.9
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 1.8e-185 653.3 590 58.6
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 1.8e-185 653.3 590 58.6
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 1.8e-185 653.3 590 58.6
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 4.5e-184 648.7 590 58.5
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 4.5e-184 648.7 709 51.2
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 5.9e-184 648.3 591 58.7
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 1.3e-183 647.1 602 56.8
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 8.5e-183 644.4 698 51.6
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 1.1e-182 644.0 594 55.4
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 1.9e-182 643.3 587 57.6
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 2.7e-181 639.4 602 57.6
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 8.0e-181 637.9 608 55.4
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 1.2e-179 634.0 553 60.9
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 1.2e-179 634.0 535 60.0
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 1.5e-179 633.6 587 57.8
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 7.5e-179 631.3 672 51.9
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 9.8e-179 630.9 606 56.6
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 3.1e-177 625.9 552 59.8
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 5.4e-177 625.2 621 54.4
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 2.0e-176 623.2 601 55.1
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 2.5e-174 616.3 608 55.3
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 2.5e-174 616.3 617 54.5
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 6.8e-172 608.2 606 54.3
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 4.4e-171 605.5 616 55.0
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 1.7e-170 603.6 602 54.0
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.2e-168 597.4 609 53.9
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 2.7e-168 596.3 541 57.7
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 6.6e-167 591.7 613 55.3
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 1.2e-163 580.9 609 53.0
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.5e-163 580.5 542 56.3
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 1.4e-161 573.9 602 53.8
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 4.6e-160 568.9 593 51.4
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 1.3e-159 567.4 485 60.6
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 1.9e-158 563.5 673 48.1
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 4.6e-152 542.3 610 50.5
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 7.3e-150 535.0 604 50.2
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 4.7e-149 532.3 427 64.2
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 1.1e-148 531.2 614 50.3
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 1.2e-147 527.7 599 48.6
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 3.2e-145 519.6 489 55.2
Gohir.A07G114448 Gossypium hirsutum HOM05D003810 ORTHO05D004416 5.6e-142 508.8 361 70.9
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 4.6e-136 489.2 452 58.2
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 9.6e-134 481.5 609 46.0
TAR627G1185 Trochodendron aralioides HOM05D003810 ORTHO05D004416 6.2e-133 478.8 370 66.8
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 2.4e-132 476.9 408 60.8
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 1.7e-130 470.7 610 43.6
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 3.8e-130 469.5 474 55.5
FvH4_6g25000 Fragaria vesca HOM05D003810 ORTHO05D004416 1.6e-128 464.2 415 59.0
Lalb_Chr06g0169751 Lupinus albus HOM05D003810 ORTHO05D004416 3.5e-128 463.0 396 60.1
AagrBONN_evm.TU.Sc2ySwM_117.3105 Anthoceros agrestis HOM05D003810 ORTHO05D004416 1.3e-125 454.5 606 44.1
Prupe.5G213500 Prunus persica HOM05D003810 ORTHO05D004416 9.0e-124 448.4 477 53.5
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 2.6e-123 446.8 578 47.1
Potri.005G061432 Populus trichocarpa HOM05D003810 ORTHO05D004416 5.3e-116 422.5 367 60.8
CiPaw.14G066900 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.4e-113 414.5 351 60.7
Prupe.5G046900 Prunus persica HOM05D003810 ORTHO05D004416 1.8e-111 407.5 478 49.8
Thhalv10011448m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 2.5e-105 387.1 553 44.5
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 2.3e-103 380.6 448 51.3
CARHR219980 Cardamine hirsuta HOM05D003810 ORTHO05D004416 9.0e-100 368.6 374 54.3
BcaC08g42928 Brassica carinata HOM05D003810 ORTHO05D004416 3.3e-94 350.1 499 44.3
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 1.3e-93 348.2 589 37.9
MD08G1246300 Malus domestica HOM05D003810 ORTHO05D004416 2.6e-86 323.9 224 73.7
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 5.3e-84 316.2 467 42.4
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.1e-80 302.8 441 42.2
Gohir.A07G114432 Gossypium hirsutum HOM05D003810 ORTHO05D004416 1.2e-70 271.9 218 63.3
BolC6t35297H Brassica oleracea HOM05D003810 ORTHO05D004416 3.1e-68 263.8 321 46.4
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 4.1e-68 263.5 326 48.8
FAN05G0299 Fragaria x ananassa HOM05D003810 ORTHO05D010162 7.0e-68 262.7 203 68.0
RcHm_v2.0_Chr2g0090241 Rosa chinensis HOM05D003810 ORTHO05D004416 3.6e-64 250.4 513 37.6
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 4.7e-64 250.0 197 62.4
FAN09G2262 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.4e-60 237.7 327 42.5
CBR_g28523 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-60 237.3 249 51.0
SHI21694 Sapria himalayana HOM05D003810 ORTHO05D004416 1.2e-59 235.3 221 55.2
Lalb_Chr06g0169761 Lupinus albus HOM05D003810 ORTHO05D004416 3.5e-59 233.8 212 54.7
Lj3g0026478 Lotus japonicus HOM05D003810 ORTHO05D004416 4.5e-59 233.4 300 44.3
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 6.1e-56 223.0 187 58.3
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.0e-55 222.2 206 55.3
CiPaw.14G066700 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.4e-55 221.9 213 52.1
Hma1.2p1_2995F.1_g331440 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.6e-48 198.4 344 40.1
MD08G1246400 Malus domestica HOM05D003810 ORTHO05D004416 1.6e-48 198.4 165 58.2
CAN.G306.2 Capsicum annuum HOM05D003810 ORTHO05D004416 4.7e-48 196.8 175 60.6
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 4.7e-48 196.8 286 43.7
CAN.G306.3 Capsicum annuum HOM05D003810 ORTHO05D004416 6.1e-48 196.4 175 60.6
HPP92_016056 Vanilla planifolia HOM05D003810 ORTHO05D004416 7.0e-44 183.0 120 74.2
Hma1.2p1_2995F.1_g331430 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 2.7e-43 181.0 199 52.3
Hund17709 Selenicereus undatus HOM05D003810 ORTHO05D004416 1.4e-39 168.7 228 45.2
ECA233G1945 Erigeron canadensis HOM05D000449 ORTHO05D003939 2.0e-38 164.9 313 35.8
Actinidia03659 Actinidia chinensis HOM05D003810 ORTHO05D004416 7.3e-33 146.4 144 52.1
Oeu005536.2 Olea europaea HOM05D003810 ORTHO05D004416 1.6e-27 128.6 166 45.8
CAN.G790.44 Capsicum annuum HOM05D000872 ORTHO05D000777 2.3e-26 124.8 196 41.8
SGA_v2.0_scaffold126G33829 Striga asiatica HOM05D003810 ORTHO05D004416 1.4e-23 115.5 179 41.3
CAN.G312.5 Capsicum annuum HOM05D003810 ORTHO05D000001 3.4e-22 110.9 193 39.9
MCO14G434 Micromonas commoda HOM05D003810 ORTHO05D004416 3.4e-22 110.9 742 21.8
PRCOL_00004489 Prasinoderma coloniale HOM05D003810 ORTHO05D004416 4.4e-22 110.5 535 24.3
SMO031G0001 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 4.4e-22 110.5 122 42.6
QL12p013194 Quercus lobata HOM05D003810 ORTHO05D004416 4.9e-21 107.1 184 38.0
TPR.G30194 Trifolium pratense HOM05D003810 ORTHO05D004416 8.4e-21 106.3 198 37.9
CAN.G1328.7 Capsicum annuum HOM05D003810 ORTHO05D004416 7.8e-19 99.8 76 64.5
SHI21692 Sapria himalayana HOM05D003810 ORTHO05D004416 5.1e-18 97.1 105 47.6
SalBow3G3831 Salvia bowleyana HOM05D003810 ORTHO05D004416 1.9e-17 95.1 121 46.3
CAN.G289.45 Capsicum annuum HOM05D002177 ORTHO05D004416 2.5e-17 94.7 80 57.5
CAN.G1057.19 Capsicum annuum HOM05D000222 ORTHO05D004416 4.3e-17 94.0 157 40.8
TAR629G2180 Trochodendron aralioides HOM05D003810 ORTHO05D004416 2.8e-16 91.3 65 66.2
Sabra05G0051600 Salix brachista HOM05D003810 ORTHO05D004416 3.6e-16 90.9 207 33.8
SHI21696 Sapria himalayana HOM05D003810 ORTHO05D004416 1.4e-15 89.0 108 48.1
Hund08475 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.4e-15 88.2 58 74.1
ClCG09G022970 Citrullus lanatus HOM05D003810 ORTHO05D004416 6.9e-15 86.7 69 65.2
SalBow3G0229 Salvia bowleyana HOM05D003810 ORTHO05D004416 9.3e-12 76.3 74 52.7
CDE07G1690 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 2.7e-11 74.7 139 40.3
CAN.G11.19 Capsicum annuum HOM05D003810 ORTHO05D004416 1.0e-10 72.8 56 58.9
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 1.7e-10 72.0 53 62.3
Cre10.g466550 Chlamydomonas reinhardtii HOM05D003810 ORTHO05D004416 5.1e-10 70.5 276 26.4
CAN.G1034.2 Capsicum annuum HOM05D000222 ORTHO05D011077 6.6e-10 70.1 232 29.3
CAN.G1077.9 Capsicum annuum HOM05D000222 ORTHO05D012343 2.5e-09 68.2 156 34.0
TPR.G30768 Trifolium pratense HOM05D003810 ORTHO05D004416 1.3e-08 65.9 66 56.1
MD08G1246200 Malus domestica HOM05D003810 ORTHO05D004416 1.6e-08 65.5 71 46.5
Mapoly0063s0044 Marchantia polymorpha HOM05D003810 ORTHO05D004416 2.8e-08 64.7 84 44.0
Nitab4.5_0001303g0160 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.8e-07 62.0 247 26.3
Lsat_1_v5_gn_2_75840 Lactuca sativa HOM05D001134 ORTHO05D004416 2.0e-06 58.5 121 37.2
CAN.G523.5 Capsicum annuum HOM05D000222 ORTHO05D012343 3.4e-06 57.8 63 47.6


User provided reference genes

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