Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os06g0106100 Oryza sativa ssp. japonica HOM05D003885 ORTHO05D004623 3.6e-113 411.8 231 100.0
Zm00001eb119790 Zea mays HOM05D003885 ORTHO05D004623 2.3e-104 382.5 232 94.4
Zm00001eb338740 Zea mays HOM05D003885 ORTHO05D004623 2.6e-100 369.0 232 92.7
Ah.06g181560 Amaranthus hybridus HOM05D003885 ORTHO05D004623 1.0e-91 340.5 233 82.0
Ah.13g073470 Amaranthus hybridus HOM05D003885 ORTHO05D004623 2.2e-91 339.3 235 82.6
QL08p003216 Quercus lobata HOM05D003885 ORTHO05D004623 1.2e-89 333.6 230 81.3
TAR629G2602 Trochodendron aralioides HOM05D003885 ORTHO05D004623 1.6e-89 333.2 231 81.8
Haze_09860 Corylus avellana HOM05D003885 ORTHO05D004623 8.0e-89 330.9 232 81.0
Cfa016929 Carpinus fangiana HOM05D003885 ORTHO05D004623 3.0e-88 328.9 232 81.0
Actinidia30379 Actinidia chinensis HOM05D003885 ORTHO05D004623 4.0e-88 328.6 232 80.6
Nn1g07757 Nelumbo nucifera HOM05D003885 ORTHO05D004623 8.8e-88 327.4 232 81.5
HPP92_015188 Vanilla planifolia HOM05D003885 ORTHO05D004623 8.8e-88 327.4 234 80.8
Rhsim06G0232400 Rhododendron simsii HOM05D003885 ORTHO05D004623 1.5e-87 326.6 248 75.4
COL.COLO4_07729 Corchorus olitorius HOM05D003885 ORTHO05D004623 2.0e-87 326.2 232 81.5
CSS0008032 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.6e-87 325.9 233 79.0
CSS0014433 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 2.6e-87 325.9 233 79.0
Prupe.6G027200 Prunus persica HOM05D003885 ORTHO05D004623 3.4e-87 325.5 231 80.5
CANSAT56G2895 Cannabis sativa HOM05D003885 ORTHO05D004623 5.7e-87 324.7 231 78.8
Thhalv10021450m.g Eutrema salsugineum HOM05D003885 ORTHO05D004623 5.7e-87 324.7 233 79.4
Aa31LG8G410 Aethionema arabicum HOM05D003885 ORTHO05D004623 7.5e-87 324.3 233 78.5
MD03G1032500 Malus domestica HOM05D003885 ORTHO05D004623 9.8e-87 323.9 232 80.6
MD11G1036400 Malus domestica HOM05D003885 ORTHO05D004623 9.8e-87 323.9 232 80.6
TWI39G1241 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 9.8e-87 323.9 231 79.2
AL3G24950 Arabidopsis lyrata HOM05D003885 ORTHO05D004623 4.8e-86 321.6 233 78.1
DCAR_019010 Daucus carota HOM05D003885 ORTHO05D004623 8.3e-86 320.9 231 80.5
Potri.001G370366 Populus trichocarpa HOM05D003885 ORTHO05D004623 8.3e-86 320.9 232 79.3
Atru.chr2.3832 Acer truncatum HOM05D003885 ORTHO05D004623 1.1e-85 320.5 232 79.7
Lj4g0022976 Lotus japonicus HOM05D003885 ORTHO05D004623 1.1e-85 320.5 231 77.9
BcaB06g25479 Brassica carinata HOM05D003885 ORTHO05D004623 2.4e-85 319.3 233 77.7
A05p36370 Brassica napus HOM05D003885 ORTHO05D004623 2.4e-85 319.3 233 77.7
BraA05t22437Z Brassica rapa HOM05D003885 ORTHO05D004623 2.4e-85 319.3 233 77.7
TPR.G2621 Trifolium pratense HOM05D003885 ORTHO05D004623 3.1e-85 318.9 231 78.4
Carub.0003s1256 Capsella rubella HOM05D003885 ORTHO05D004623 5.4e-85 318.2 233 77.3
Ciclev10009386m.g Citrus clementina HOM05D003885 ORTHO05D004623 5.4e-85 318.2 232 80.2
TAR627G0008 Trochodendron aralioides HOM05D003885 ORTHO05D004623 9.1e-85 317.4 232 78.0
Thecc.07G008300 Theobroma cacao HOM05D003885 ORTHO05D004623 1.2e-84 317.0 231 79.2
ClCG10G004480 Citrullus lanatus HOM05D003885 ORTHO05D004623 1.6e-84 316.6 232 78.4
THA.LOC104822723 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 1.6e-84 316.6 233 78.1
Sp3g11380 Schrenkiella parvula HOM05D003885 ORTHO05D004623 2.0e-84 316.2 233 77.3
BolC1t05136H Brassica oleracea HOM05D003885 ORTHO05D004623 4.5e-84 315.1 233 76.8
Lj1g0011673 Lotus japonicus HOM05D003885 ORTHO05D004623 4.5e-84 315.1 232 77.6
AT3G13200 Arabidopsis thaliana HOM05D003885 ORTHO05D004623 5.9e-84 314.7 233 76.8
BcaB04g18746 Brassica carinata HOM05D003885 ORTHO05D004623 5.9e-84 314.7 231 77.5
C05p54750 Brassica napus HOM05D003885 ORTHO05D004623 5.9e-84 314.7 234 76.9
BolC5t34149H Brassica oleracea HOM05D003885 ORTHO05D004623 5.9e-84 314.7 234 76.9
CARHR087790 Cardamine hirsuta HOM05D003885 ORTHO05D004623 1.3e-83 313.5 233 76.8
Cc05_g15250 Coffea canephora HOM05D003885 ORTHO05D004623 1.3e-83 313.5 232 79.3
Duzib213G0370 Durio zibethinus HOM05D003885 ORTHO05D004623 1.3e-83 313.5 232 78.9
Gohir.D13G134400 Gossypium hirsutum HOM05D003885 ORTHO05D004623 1.3e-83 313.5 233 78.5
Manes.03G143400 Manihot esculenta HOM05D003885 ORTHO05D004623 1.7e-83 313.2 233 77.3
DCAR_003369 Daucus carota HOM05D003885 ORTHO05D004623 2.3e-83 312.8 231 79.7
Hund01874 Selenicereus undatus HOM05D003885 ORTHO05D004623 2.3e-83 312.8 232 78.4
VMungo0251G1810 Vigna mungo HOM05D003885 ORTHO05D004623 2.3e-83 312.8 231 78.8
Hund01875 Selenicereus undatus HOM05D003885 ORTHO05D004623 2.9e-83 312.4 231 78.4
Gorai.013G150700 Gossypium raimondii HOM05D003885 ORTHO05D004623 3.8e-83 312.0 234 77.8
ATR1153G045 Amborella trichopoda HOM05D003885 ORTHO05D004623 5.0e-83 311.6 234 78.2
A01p40350 Brassica napus HOM05D003885 ORTHO05D004623 6.5e-83 311.2 233 76.4
A03p38080 Brassica napus HOM05D003885 ORTHO05D004623 6.5e-83 311.2 233 76.4
BolC3t16892H Brassica oleracea HOM05D003885 ORTHO05D004623 6.5e-83 311.2 233 76.4
BraA01t04070Z Brassica rapa HOM05D003885 ORTHO05D004623 6.5e-83 311.2 233 76.4
BraA03t12961Z Brassica rapa HOM05D003885 ORTHO05D004623 6.5e-83 311.2 233 76.4
Gohir.A13G131100 Gossypium hirsutum HOM05D003885 ORTHO05D004623 1.1e-82 310.5 233 77.7
FAN14G2004 Fragaria x ananassa HOM05D003885 ORTHO05D004623 1.5e-82 310.1 233 76.0
Glyma.17G141500 Glycine max HOM05D003885 ORTHO05D004623 1.5e-82 310.1 231 77.5
Aqoxy3G02916 Aquilegia oxysepala HOM05D003885 ORTHO05D004623 2.5e-82 309.3 234 77.4
C01p51880 Brassica napus HOM05D003885 ORTHO05D004623 3.3e-82 308.9 233 76.0
THA.LOC104815689 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 9.5e-82 307.4 237 75.9
Lalb_Chr16g0386671 Lupinus albus HOM05D003885 ORTHO05D004623 1.6e-81 306.6 231 76.2
Psat0s1834g0040 Pisum sativum HOM05D003885 ORTHO05D004623 1.6e-81 306.6 231 76.6
arahy.Tifrunner.gnm1.ann1.JC0UDE Arachis hypogaea HOM05D003885 ORTHO05D004623 4.7e-81 305.1 233 76.8
EL10Ac4g07536 Beta vulgaris HOM05D003885 ORTHO05D004623 4.7e-81 305.1 243 74.1
Glyma.05G059200 Glycine max HOM05D003885 ORTHO05D004623 8.0e-81 304.3 231 76.2
Sed0017804 Sechium edule HOM05D003885 ORTHO05D004623 1.8e-80 303.1 231 75.8
CsaV3_3G004310 Cucumis sativus L. HOM05D003885 ORTHO05D004623 3.0e-80 302.4 231 74.9
BcaC05g29203 Brassica carinata HOM05D003885 ORTHO05D004623 4.0e-80 302.0 234 74.4
TWI38G2335 Tripterygium wilfordii HOM05D003885 ORTHO05D004623 4.0e-80 302.0 232 75.0
PGR083G1050 Punica granatum HOM05D003885 ORTHO05D004623 1.2e-79 300.4 233 77.7
THA.LOC104810295 Tarenaya hassleriana HOM05D003885 ORTHO05D004623 1.5e-79 300.1 233 75.1
Ca_21964_v3 Cicer arietinum L. HOM05D003885 ORTHO05D004623 4.4e-79 298.5 232 75.0
Lj1C893G21 Lonicera japonica HOM05D003885 ORTHO05D004623 7.5e-79 297.7 231 72.7
Phvul.003G220300 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 7.5e-79 297.7 231 75.3
RcHm_v2.0_Chr3g0480061 Rosa chinensis HOM05D003885 ORTHO05D004623 7.5e-79 297.7 234 74.8
FvH4_6g22570 Fragaria vesca HOM05D003885 ORTHO05D004623 1.3e-78 297.0 233 73.8
FAN14G0574 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.7e-78 295.4 233 73.4
MELO3C014122.2 Cucumis melo HOM05D003885 ORTHO05D004623 4.9e-78 295.0 232 74.1
Dinv40883 Davidia involucrata HOM05D003885 ORTHO05D004623 6.3e-78 294.7 231 69.7
FAN09G2902 Fragaria x ananassa HOM05D003885 ORTHO05D004623 6.3e-78 294.7 234 74.8
Medtr4g100970 Medicago truncatula HOM05D003885 ORTHO05D004623 8.3e-78 294.3 231 74.0
vmacro11612 Vaccinium macrocarpon HOM05D003885 ORTHO05D004623 8.3e-78 294.3 231 70.6
FAN05G2176 Fragaria x ananassa HOM05D003885 ORTHO05D004623 1.1e-77 293.9 234 73.5
Lsat_1_v5_gn_5_188801 Lactuca sativa HOM05D003885 ORTHO05D004623 1.1e-77 293.9 232 73.7
ECA246G5298 Erigeron canadensis HOM05D003885 ORTHO05D004623 1.4e-77 293.5 231 74.9
Sc03g0011570 Simmondsia chinensis HOM05D003885 ORTHO05D004623 1.4e-77 293.5 233 74.7
AUR62017134 Chenopodium quinoa HOM05D003885 ORTHO05D004623 1.8e-77 293.1 238 69.7
CiPaw.12G140300 Carya illinoinensis HOM05D003885 ORTHO05D004623 9.2e-77 290.8 231 73.2
Sabra16G0243800 Salix brachista HOM05D003885 ORTHO05D004623 2.0e-76 289.7 253 66.0
PSO210G1946 Papaver somniferum HOM05D003885 ORTHO05D004623 4.5e-76 288.5 231 73.6
PSO210G5551 Papaver somniferum HOM05D003885 ORTHO05D004623 4.5e-76 288.5 231 73.6
Sed0004751 Sechium edule HOM05D003885 ORTHO05D004623 5.0e-75 285.0 232 74.1
MBI11_g04749_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 6.6e-75 284.6 236 72.5
AUR62035674 Chenopodium quinoa HOM05D003885 ORTHO05D004623 8.6e-75 284.3 232 68.1
Hma1.2p1_0193F.1_g083890 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 1.6e-73 280.0 286 59.1
CAN.G492.53 Capsicum annuum HOM05D003885 ORTHO05D004623 3.6e-73 278.9 231 71.4
Nitab4.5_0010643g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 3.6e-73 278.9 231 71.9
GSVIVG01014735001 Vitis vinifera HOM05D003885 ORTHO05D004623 6.1e-73 278.1 233 72.1
Phvul.008G217400 Phaseolus vulgaris HOM05D003885 ORTHO05D004623 8.0e-73 277.7 231 68.0
Sopen07g033990 Solanum pennellii HOM05D003885 ORTHO05D004623 8.0e-73 277.7 232 72.8
C03p46210 Brassica napus HOM05D003885 ORTHO05D004623 1.0e-72 277.3 233 71.7
Eucgr.F02030 Eucalyptus grandis HOM05D003885 ORTHO05D004623 1.4e-72 276.9 234 71.4
Nitab4.5_0005478g0040 Nicotiana tabacum HOM05D003885 ORTHO05D004623 3.0e-72 275.8 232 67.2
MSTRG.14500 Avicennia marina HOM05D003885 ORTHO05D004623 2.6e-71 272.7 232 70.7
PGSC0003DMG400008684 Solanum tuberosum HOM05D003885 ORTHO05D004623 3.4e-71 272.3 233 69.5
PGSC0003DMG400022160 Solanum tuberosum HOM05D003885 ORTHO05D004623 1.7e-70 270.0 239 70.7
Solyc10g005800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 2.2e-70 269.6 234 69.2
Sopen10g001770 Solanum pennellii HOM05D003885 ORTHO05D004623 2.2e-70 269.6 234 69.2
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 4.9e-70 268.5 227 70.5
Pp3c5_15120 Physcomitrium patens HOM05D003885 ORTHO05D004623 4.9e-70 268.5 235 68.9
Lalb_Chr05g0221281 Lupinus albus HOM05D003885 ORTHO05D004623 4.1e-69 265.4 231 68.4
Peaxi162Scf00139g01026 Petunia axillaris HOM05D003885 ORTHO05D004623 4.1e-69 265.4 231 64.5
AagrBONN_evm.TU.Sc2ySwM_228.690 Anthoceros agrestis HOM05D003885 ORTHO05D004623 9.2e-69 264.2 231 69.7
FAN02G3468 Fragaria x ananassa HOM05D003885 ORTHO05D004623 3.5e-68 262.3 217 73.3
Mapoly0072s0064 Marchantia polymorpha HOM05D003885 ORTHO05D004623 1.7e-67 260.0 234 68.8
Duzib170G0277 Durio zibethinus HOM05D003885 ORTHO05D004623 6.6e-67 258.1 231 66.7
SalBow2G3065 Salvia bowleyana HOM05D003885 ORTHO05D004623 8.6e-67 257.7 231 64.5
MSTRG.13030 Avicennia marina HOM05D003885 ORTHO05D004623 1.5e-66 256.9 233 67.4
unitig_61.g26133 Utricularia gibba HOM05D003885 ORTHO05D004623 9.5e-66 254.2 234 66.2
Lsat_1_v5_gn_5_2000 Lactuca sativa HOM05D003885 ORTHO05D004623 1.1e-64 250.8 271 59.0
SalBow2G0786 Salvia bowleyana HOM05D003885 ORTHO05D004623 1.2e-63 247.3 231 67.1
HanXRQChr08g0233271 Helianthus annuus HOM05D003885 ORTHO05D004623 2.6e-63 246.1 231 65.8
HanXRQChr05g0160321 Helianthus annuus HOM05D003885 ORTHO05D004623 5.8e-63 245.0 231 65.8
CBR_g58788 Chara braunii HOM05D003885 ORTHO05D004623 7.5e-63 244.6 233 66.5
SalBow2G1425 Salvia bowleyana HOM05D003885 ORTHO05D004623 7.5e-63 244.6 231 66.7
SalBow8G3434 Salvia bowleyana HOM05D003885 ORTHO05D004623 3.7e-62 242.3 231 66.2
SalBow2G3218 Salvia bowleyana HOM05D003885 ORTHO05D004623 6.4e-62 241.5 231 65.8
Migut.M01631 Erythranthe guttata HOM05D003885 ORTHO05D004623 1.4e-61 240.4 231 66.2
unitig_0.g990 Utricularia gibba HOM05D003885 ORTHO05D004623 3.2e-61 239.2 234 65.0
Nitab4.5_0003328g0110 Nicotiana tabacum HOM05D003885 ORTHO05D004623 1.2e-60 237.3 233 65.7
SHI27704 Sapria himalayana HOM05D003885 ORTHO05D004623 5.2e-56 221.9 190 72.1
Nn1g07559 Nelumbo nucifera HOM05D003885 ORTHO05D004623 2.2e-54 216.5 155 81.9
Actinidia10568 Actinidia chinensis HOM05D003885 ORTHO05D004623 4.9e-54 215.3 186 72.0
SMO356G0623 Selaginella moellendorffii HOM05D003885 ORTHO05D004623 9.2e-53 211.1 238 60.9
Cre24.g755447 Chlamydomonas reinhardtii HOM05D003885 ORTHO05D004623 1.8e-48 196.8 241 55.2
CSS0035354 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 5.2e-48 195.3 233 57.9
MCO14G028 Micromonas commoda HOM05D003885 ORTHO05D004623 2.6e-47 193.0 234 55.6
SGA_v2.0_scaffold8G04417 Striga asiatica HOM05D003885 ORTHO05D004623 1.7e-46 190.3 167 72.5
Nitab4.5_0000152g0340 Nicotiana tabacum HOM05D003885 ORTHO05D004623 4.9e-46 188.7 256 49.6
Hma1.2p1_0133F.1_g061250 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 3.2e-45 186.0 121 79.3
CSS0032461 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 4.2e-45 185.7 189 65.1
CSS0021051 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 3.0e-43 179.5 121 76.0
TPR.G37597 Trifolium pratense HOM05D003885 ORTHO05D004623 5.1e-43 178.7 122 75.4
SalBow2G2880 Salvia bowleyana HOM05D003885 ORTHO05D004623 5.3e-40 168.7 113 79.6
SalBow2G0143 Salvia bowleyana HOM05D003885 ORTHO05D004623 6.9e-40 168.3 113 78.8
SalBow2G2704 Salvia bowleyana HOM05D003885 ORTHO05D004623 7.6e-39 164.9 113 77.9
Hma1.2p1_0133F.1_g061260 Hydrangea macrophylla HOM05D003885 ORTHO05D004623 2.3e-35 153.3 99 81.8
RcHm_v2.0_Chr1g0318721 Rosa chinensis HOM05D003885 ORTHO05D004623 2.3e-35 153.3 123 68.3
Solyc07g065800.3 Solanum lycopersicum HOM05D003885 ORTHO05D004623 4.3e-34 149.1 157 64.3
arahy.Tifrunner.gnm1.ann1.BGFV7A Arachis hypogaea HOM05D003885 ORTHO05D004623 1.6e-33 147.1 95 82.1
BcaC01g04006 Brassica carinata HOM05D003885 ORTHO05D004623 3.1e-32 142.9 99 76.8
Zm00001eb157240 Zea mays HOM05D003885 ORTHO05D004623 3.1e-32 142.9 78 92.3
CAN.G1427.13 Capsicum annuum HOM05D000822 ORTHO05D004949 3.2e-29 132.9 175 55.4
TPR.G37600 Trifolium pratense HOM05D003885 ORTHO05D004623 1.9e-26 123.6 78 82.1
MCO14G027 Micromonas commoda HOM05D003885 ORTHO05D004623 5.6e-26 122.1 179 50.8
MBI19_g41323_MAGBIO Magnolia biondii HOM05D003885 ORTHO05D004623 7.4e-26 121.7 83 74.7
PRCOL_00003569 Prasinoderma coloniale HOM05D003885 ORTHO05D004623 1.1e-24 117.9 231 41.6
BcaB04g21002 Brassica carinata HOM05D003885 ORTHO05D004623 1.4e-24 117.5 91 69.2
COL.COLO4_09698 Corchorus olitorius HOM05D003885 ORTHO05D004623 2.4e-24 116.7 97 63.9
C05p54720 Brassica napus HOM05D003885 ORTHO05D004623 4.9e-22 109.0 113 65.5
RcHm_v2.0_Chr3g0468911 Rosa chinensis HOM05D003885 ORTHO05D004623 3.3e-18 96.3 228 34.2
ATR0733G199 Amborella trichopoda HOM05D003885 ORTHO05D004623 2.1e-17 93.6 75 73.3
SalBow8G5188 Salvia bowleyana HOM05D003885 ORTHO05D004623 6.2e-17 92.0 175 41.1
ATR0733G138 Amborella trichopoda HOM05D003885 ORTHO05D004623 2.6e-15 86.7 44 90.9
PSO384G2596 Papaver somniferum HOM05D003885 ORTHO05D004623 8.4e-14 81.6 73 64.4
Zm00001eb225910 Zea mays HOM05D003885 ORTHO05D444501 4.6e-12 75.9 49 85.7
Lsat_1_v5_gn_8_106160 Lactuca sativa HOM05D003885 ORTHO05D004623 6.0e-12 75.5 66 60.6
Haze_27574 Corylus avellana HOM05D003885 ORTHO05D164292 5.1e-11 72.4 150 36.7
CSS0038981 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 6.3e-09 65.5 92 51.1
CSS0001317 Camellia sinensis var. sinensis HOM05D003885 ORTHO05D004623 5.9e-07 58.9 89 43.8


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