Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os04g0692100 Oryza sativa ssp. japonica HOM05D005979 ORTHO05D007848 4.0e-139 498.0 247 100.0
Zm00001eb076570 Zea mays HOM05D005979 ORTHO05D007848 1.7e-108 396.4 281 70.8
HanXRQChr05g0144951 Helianthus annuus HOM05D005979 ORTHO05D007848 1.6e-95 353.2 247 69.2
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 7.5e-93 344.4 242 69.0
Dinv35473 Davidia involucrata HOM05D005979 ORTHO05D007848 9.8e-93 344.0 243 69.1
Cpa.g.sc5.208 Carica papaya HOM05D005979 ORTHO05D007848 1.3e-92 343.6 244 67.6
Lsat_1_v5_gn_0_460 Lactuca sativa HOM05D005979 ORTHO05D007848 3.7e-92 342.0 241 67.6
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 2.4e-91 339.3 243 66.7
BraA05t22680Z Brassica rapa HOM05D005979 ORTHO05D007848 2.4e-91 339.3 244 65.2
ECA232G1805 Erigeron canadensis HOM05D005979 ORTHO05D007848 2.4e-91 339.3 243 68.3
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 4.1e-91 338.6 247 68.4
MBI09_g07121_MAGBIO Magnolia biondii HOM05D005979 ORTHO05D007848 7.0e-91 337.8 242 67.4
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 9.1e-91 337.4 243 67.5
FvH4_4g13730 Fragaria vesca HOM05D005979 ORTHO05D007848 1.2e-90 337.0 238 69.3
FAN12G2831 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.2e-90 337.0 238 69.3
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 1.2e-90 337.0 243 67.5
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 1.6e-90 336.7 233 69.1
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 1.6e-90 336.7 243 68.7
Cc02_g19250 Coffea canephora HOM05D005979 ORTHO05D007848 2.7e-90 335.9 244 68.4
C05p57920 Brassica napus HOM05D005979 ORTHO05D007848 3.5e-90 335.5 244 64.8
FAN17G0168 Fragaria x ananassa HOM05D005979 ORTHO05D007848 4.5e-90 335.1 238 69.7
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 4.5e-90 335.1 243 67.1
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 5.9e-90 334.7 243 67.5
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 7.7e-90 334.3 244 66.8
Eucgr.K01638 Eucalyptus grandis HOM05D005979 ORTHO05D007848 7.7e-90 334.3 235 68.5
Sopen03g028870 Solanum pennellii HOM05D005979 ORTHO05D007848 7.7e-90 334.3 243 65.4
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 1.0e-89 334.0 243 64.2
A05p38880 Brassica napus HOM05D005979 ORTHO05D007848 1.0e-89 334.0 244 63.9
BcaNung05525 Brassica carinata HOM05D005979 ORTHO05D007848 1.3e-89 333.6 244 63.9
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.3e-89 333.6 243 67.5
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 1.7e-89 333.2 244 65.6
BolC5t34447H Brassica oleracea HOM05D005979 ORTHO05D007848 2.2e-89 332.8 244 64.8
CANSAT64G2596 Cannabis sativa HOM05D005979 ORTHO05D007848 2.2e-89 332.8 235 68.1
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 2.2e-89 332.8 244 66.0
RcHm_v2.0_Chr4g0414381 Rosa chinensis HOM05D005979 ORTHO05D007848 2.2e-89 332.8 238 68.5
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 2.2e-89 332.8 243 65.4
MD04G1012500 Malus domestica HOM05D005979 ORTHO05D007848 2.9e-89 332.4 247 66.4
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 2.9e-89 332.4 244 65.6
Sp3g08500 Schrenkiella parvula HOM05D005979 ORTHO05D007848 3.8e-89 332.0 244 64.8
Sed0017937 Sechium edule HOM05D005979 ORTHO05D007848 5.0e-89 331.6 236 68.6
TWI77G1019 Tripterygium wilfordii HOM05D005979 ORTHO05D007848 5.0e-89 331.6 241 65.6
CDE08G1123 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 6.5e-89 331.3 242 66.1
TPR.G19644 Trifolium pratense HOM05D005979 ORTHO05D007848 8.5e-89 330.9 247 67.2
VMungo0251G0166 Vigna mungo HOM05D005979 ORTHO05D007848 8.5e-89 330.9 244 67.2
Actinidia40001 Actinidia chinensis HOM05D005979 ORTHO05D007848 1.1e-88 330.5 242 66.5
CDE06G1795 Ceratophyllum demersum HOM05D005979 ORTHO05D007848 1.1e-88 330.5 242 66.1
Thhalv10021412m.g Eutrema salsugineum HOM05D005979 ORTHO05D007848 1.1e-88 330.5 244 64.8
Nn7g36654 Nelumbo nucifera HOM05D005979 ORTHO05D007848 1.1e-88 330.5 243 66.7
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 1.5e-88 330.1 244 68.0
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 1.5e-88 330.1 244 63.9
Aa31LG3G2790 Aethionema arabicum HOM05D005979 ORTHO05D007848 1.9e-88 329.7 244 64.3
BcaB04g21222 Brassica carinata HOM05D005979 ORTHO05D007848 1.9e-88 329.7 244 64.3
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 2.5e-88 329.3 243 66.7
Phvul.002G285700 Phaseolus vulgaris HOM05D005979 ORTHO05D007848 3.2e-88 328.9 244 66.8
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 3.2e-88 328.9 243 65.0
AT3G10220 Arabidopsis thaliana HOM05D005979 ORTHO05D007848 4.2e-88 328.6 244 65.2
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 4.2e-88 328.6 243 65.4
Prupe.7G257800 Prunus persica HOM05D005979 ORTHO05D007848 4.2e-88 328.6 238 67.2
Lj5g0020498 Lotus japonicus HOM05D005979 ORTHO05D007848 5.5e-88 328.2 244 66.0
Psat6g123280 Pisum sativum HOM05D005979 ORTHO05D007848 7.2e-88 327.8 247 66.4
Solyc03g098170.3 Solanum lycopersicum HOM05D005979 ORTHO05D007848 9.4e-88 327.4 243 64.2
Ciclev10021922m.g Citrus clementina HOM05D005979 ORTHO05D007848 1.2e-87 327.0 238 65.5
RcHm_v2.0_Chr6g0280571 Rosa chinensis HOM05D005979 ORTHO05D007848 1.2e-87 327.0 238 66.8
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 2.1e-87 326.2 243 66.7
Medtr1g051215 Medicago truncatula HOM05D005979 ORTHO05D007848 2.1e-87 326.2 247 65.6
CsaV3_4G027840 Cucumis sativus L. HOM05D005979 ORTHO05D007848 3.6e-87 325.5 233 67.8
Medtr0004s0600 Medicago truncatula HOM05D005979 ORTHO05D007848 3.6e-87 325.5 247 65.2
unitig_0.g99 Utricularia gibba HOM05D005979 ORTHO05D007848 3.6e-87 325.5 243 65.0
Cfa016688 Carpinus fangiana HOM05D005979 ORTHO05D007848 4.7e-87 325.1 240 66.2
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 1.0e-86 323.9 244 64.3
COL.COLO4_00190 Corchorus olitorius HOM05D005979 ORTHO05D007848 1.4e-86 323.6 238 65.1
QL07p008776 Quercus lobata HOM05D005979 ORTHO05D007848 1.8e-86 323.2 260 61.5
ATR1134G092 Amborella trichopoda HOM05D005979 ORTHO05D007848 2.3e-86 322.8 243 64.2
Ca_23806_v3 Cicer arietinum L. HOM05D005979 ORTHO05D007848 2.3e-86 322.8 247 64.0
vmacro19992 Vaccinium macrocarpon HOM05D005979 ORTHO05D007848 8.8e-86 320.9 273 59.3
DCAR_001099 Daucus carota HOM05D005979 ORTHO05D007848 1.2e-85 320.5 242 62.4
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.2e-85 320.5 243 65.0
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.0e-85 319.7 243 65.0
Hma1.2p1_0075F.1_g039230 Hydrangea macrophylla HOM05D005979 ORTHO05D007848 2.8e-84 315.8 227 66.1
Oeu013750.3 Olea europaea HOM05D005979 ORTHO05D007848 2.8e-84 315.8 282 56.7
arahy.Tifrunner.gnm1.ann1.Y5SS6T Arachis hypogaea HOM05D005979 ORTHO05D007848 4.9e-84 315.1 247 64.8
SGA_v2.0_scaffold32G13036 Striga asiatica HOM05D005979 ORTHO05D007848 4.9e-84 315.1 279 57.7
HPP92_006862 Vanilla planifolia HOM05D005979 ORTHO05D007848 1.4e-83 313.5 243 61.7
HPP92_006880 Vanilla planifolia HOM05D005979 ORTHO05D007848 5.4e-83 311.6 243 61.3
Rhsim05G0172800 Rhododendron simsii HOM05D005979 ORTHO05D007848 7.0e-83 311.2 294 55.1
TAR633G0311 Trochodendron aralioides HOM05D005979 ORTHO05D007848 3.5e-82 308.9 230 64.3
Atru.chr1.1490 Acer truncatum HOM05D005979 ORTHO05D007848 5.0e-81 305.1 230 64.8
MELO3C019044.2 Cucumis melo HOM05D005979 ORTHO05D007848 8.6e-81 304.3 220 67.7
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 3.0e-78 295.8 208 68.3
PSO170G5780 Papaver somniferum HOM05D005979 ORTHO05D007848 3.0e-78 295.8 221 65.6
EL10Ac8g19200 Beta vulgaris HOM05D005979 ORTHO05D007848 4.4e-77 292.0 240 60.0
Hund26899 Selenicereus undatus HOM05D005979 ORTHO05D007848 3.7e-76 288.9 253 57.3
SalBow6G2287 Salvia bowleyana HOM05D005979 ORTHO05D007848 4.9e-76 288.5 327 49.2
Mapoly0016s0206 Marchantia polymorpha HOM05D005979 ORTHO05D007848 2.0e-74 283.1 249 54.6
Pp3c13_18250 Physcomitrium patens HOM05D005979 ORTHO05D007848 3.9e-73 278.9 247 54.3
COL.COLO4_36506 Corchorus olitorius HOM05D005979 ORTHO05D007848 2.3e-70 269.6 204 64.7
Gorai.012G115900 Gossypium raimondii HOM05D005979 ORTHO05D007848 2.9e-68 262.7 208 63.0
Prupe.1G158700 Prunus persica HOM05D005979 ORTHO05D007848 1.9e-67 260.0 199 64.3
Nitab4.5_0003715g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 2.3e-65 253.1 242 55.0
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.9e-64 250.0 298 48.0
AagrBONN_evm.TU.Sc2ySwM_228.4763 Anthoceros agrestis HOM05D005979 ORTHO05D007848 3.6e-63 245.7 312 42.9
Lj2A41G64 Lonicera japonica HOM05D005979 ORTHO05D007848 1.4e-62 243.8 223 55.6
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.9e-60 236.1 245 51.4
CBR_g30186 Chara braunii HOM05D005979 ORTHO05D007848 7.1e-59 231.5 249 48.2
Cre15.g636300 Chlamydomonas reinhardtii HOM05D005979 ORTHO05D007848 4.3e-56 222.2 248 47.2
PRCOL_00000740 Prasinoderma coloniale HOM05D005979 ORTHO05D007848 2.1e-55 219.9 240 47.9
MCO14G471 Micromonas commoda HOM05D005979 ORTHO05D007848 9.9e-53 211.1 254 42.5
Peaxi162Scf00171g00620 Petunia axillaris HOM05D005979 ORTHO05D007848 8.7e-41 171.4 339 35.7
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 2.5e-40 169.9 111 71.2
AUR62032907 Chenopodium quinoa HOM05D005979 ORTHO05D007848 2.8e-39 166.4 251 39.4
Gohir.A04G092832 Gossypium hirsutum HOM05D005979 ORTHO05D007848 1.3e-36 157.5 140 57.9
BcaC09g48108 Brassica carinata HOM05D005979 ORTHO05D007848 8.4e-36 154.8 128 58.6
Nitab4.5_0005200g0020 Nicotiana tabacum HOM05D005979 ORTHO05D007848 4.2e-35 152.5 121 62.8
Nitab4.5_0005200g0030 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.6e-31 140.6 82 75.6
COL.COLO4_00246 Corchorus olitorius HOM05D005979 ORTHO05D007848 4.0e-22 109.4 95 55.8
SEGI_39367 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 2.9e-20 103.2 58 77.6
SEGI_37896 Sequoiadendron giganteum HOM05D005979 ORTHO05D007848 9.6e-16 88.2 94 48.9
FAN03G2583 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.2e-13 81.3 76 56.6
FAN08G3312 Fragaria x ananassa HOM05D005979 ORTHO05D007848 1.2e-13 81.3 76 56.6
FAN25G1846 Fragaria x ananassa HOM05D005979 ORTHO05D007848 3.8e-12 76.3 67 59.7
Glyma.08G011202 Glycine max HOM05D005979 ORTHO05D007848 2.5e-11 73.6 70 58.6
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 9.3e-11 71.6 73 43.8
BraA01t04267Z Brassica rapa HOM05D005979 ORTHO05D041676 6.1e-10 68.9 63 58.7
A01p41990 Brassica napus HOM05D005979 ORTHO05D041676 3.9e-09 66.2 105 41.0
Cfa025444 Carpinus fangiana HOM05D005979 ORTHO05D122864 8.7e-09 65.1 87 40.2
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 2.2e-07 60.5 73 43.8
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 3.7e-07 59.7 65 43.1
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 1.1e-06 58.2 73 38.4
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 1.4e-06 57.8 81 39.5
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 1.4e-06 57.8 76 38.2
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 1.8e-06 57.4 93 37.6
A01p41070 Brassica napus HOM05D005979 ORTHO05D007848 2.4e-06 57.0 50 52.0
BNapus_Darmor_BZH_scaffold_78p00640 Brassica napus HOM05D005979 ORTHO05D007848 2.4e-06 57.0 50 52.0
BraA01t04540Z Brassica rapa HOM05D005979 ORTHO05D007848 2.4e-06 57.0 50 52.0
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 3.1e-06 56.6 81 37.0
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 3.1e-06 56.6 81 37.0
PRCOL_00006618 Prasinoderma coloniale HOM05D000738 ORTHO05D000675 4.1e-06 56.2 70 37.1
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 4.1e-06 56.2 80 37.5
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 4.1e-06 56.2 93 37.6
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 6.9e-06 55.5 76 38.2
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 6.9e-06 55.5 76 35.5
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 6.9e-06 55.5 73 38.4
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 6.9e-06 55.5 77 37.7
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 6.9e-06 55.5 73 43.8
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 9.0e-06 55.1 73 39.7
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 9.0e-06 55.1 73 39.7
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 9.0e-06 55.1 79 35.4
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 9.0e-06 55.1 72 40.3
Nitab4.5_0001155g0010 Nicotiana tabacum HOM05D005625 ORTHO05D007564 9.0e-06 55.1 97 38.1


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