Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os01g0533450 Oryza sativa ssp. japonica HOM05D003445 ORTHO05D004114 1.1e-72 276.6 139 100.0
Zm00001eb259230 Zea mays HOM05D003445 ORTHO05D004114 9.5e-29 130.6 86 79.1
Zm00001eb191030 Zea mays HOM05D003445 ORTHO05D004114 6.2e-28 127.9 86 76.7
Os02g0822300 Oryza sativa ssp. japonica HOM05D003445 ORTHO05D004114 2.3e-27 125.9 94 72.3
TAR623G1080 Trochodendron aralioides HOM05D003445 ORTHO05D004114 9.6e-13 77.4 74 59.5
GSVIVG01016165001 Vitis vinifera HOM05D003445 ORTHO05D004114 9.6e-13 77.4 74 58.1
Aqoxy1G01069 Aquilegia oxysepala HOM05D003445 ORTHO05D004114 1.3e-12 77.0 87 52.9
Ciclev10032050m.g Citrus clementina HOM05D003445 ORTHO05D004114 1.3e-12 77.0 81 51.9
Lsat_1_v5_gn_8_17860 Lactuca sativa HOM05D003445 ORTHO05D004114 1.6e-12 76.6 77 53.2
TAR633G1158 Trochodendron aralioides HOM05D003445 ORTHO05D004114 3.6e-12 75.5 78 53.8
Nn6g35202 Nelumbo nucifera HOM05D003445 ORTHO05D004114 4.8e-12 75.1 74 54.1
Phvul.007G141100 Phaseolus vulgaris HOM05D003445 ORTHO05D004114 4.8e-12 75.1 84 53.6
Glyma.10G198300 Glycine max HOM05D003445 ORTHO05D004114 6.2e-12 74.7 85 56.5
Hma1.2p1_1009F.1_g247280 Hydrangea macrophylla HOM05D003445 ORTHO05D004114 6.2e-12 74.7 77 54.5
Manes.11G087166 Manihot esculenta HOM05D003445 ORTHO05D004114 6.2e-12 74.7 74 55.4
HPP92_020767 Vanilla planifolia HOM05D003445 ORTHO05D004114 6.2e-12 74.7 86 51.2
VMungo0720G0843 Vigna mungo HOM05D003445 ORTHO05D004114 6.2e-12 74.7 84 53.6
CSS0030750 Camellia sinensis var. sinensis HOM05D003445 ORTHO05D004114 8.1e-12 74.3 83 47.0
Eucgr.G02737 Eucalyptus grandis HOM05D003445 ORTHO05D004114 8.1e-12 74.3 74 58.1
PSO339G4614 Papaver somniferum HOM05D003445 ORTHO05D004114 8.1e-12 74.3 77 54.5
SalBow4G0167 Salvia bowleyana HOM05D003445 ORTHO05D004114 1.1e-11 73.9 75 53.3
ATR0043G023 Amborella trichopoda HOM05D003445 ORTHO05D004114 1.4e-11 73.6 84 46.4
CANSAT56G2777 Cannabis sativa HOM05D003445 ORTHO05D004114 1.4e-11 73.6 71 59.2
vmacro10262 Vaccinium macrocarpon HOM05D003445 ORTHO05D004114 1.4e-11 73.6 77 53.2
DCAR_019061 Daucus carota HOM05D003445 ORTHO05D004114 1.8e-11 73.2 76 50.0
Glyma.20G191700 Glycine max HOM05D003445 ORTHO05D004114 1.8e-11 73.2 85 55.3
Lsat_1_v5_gn_2_103201 Lactuca sativa HOM05D003445 ORTHO05D004114 1.8e-11 73.2 77 50.6
Sc09g0005840 Simmondsia chinensis HOM05D003445 ORTHO05D004114 1.8e-11 73.2 74 59.5
HPP92_014722 Vanilla planifolia HOM05D003445 ORTHO05D004114 1.8e-11 73.2 85 45.9
EL10As9g23938 Beta vulgaris HOM05D003445 ORTHO05D004114 2.4e-11 72.8 71 57.7
Cfa001777 Carpinus fangiana HOM05D003445 ORTHO05D004114 3.1e-11 72.4 75 56.0
Haze_16775 Corylus avellana HOM05D003445 ORTHO05D004114 3.1e-11 72.4 75 56.0
Dinv36360 Davidia involucrata HOM05D003445 ORTHO05D004114 3.1e-11 72.4 77 51.9
Migut.F01911 Erythranthe guttata HOM05D003445 ORTHO05D004114 3.1e-11 72.4 81 51.9
Lj3C935G7 Lonicera japonica HOM05D003445 ORTHO05D004114 3.1e-11 72.4 74 52.7
PSO801G0704 Papaver somniferum HOM05D003445 ORTHO05D004114 3.1e-11 72.4 77 53.2
QL08p053096 Quercus lobata HOM05D003445 ORTHO05D004114 3.1e-11 72.4 75 54.7
Ca_10454_v3 Cicer arietinum L. HOM05D003445 ORTHO05D004114 4.0e-11 72.0 84 51.2
Dinv31260 Davidia involucrata HOM05D003445 ORTHO05D004114 4.0e-11 72.0 73 53.4
AL6G14070 Arabidopsis lyrata HOM05D003445 ORTHO05D004114 5.3e-11 71.6 74 51.4
AT5G04430 Arabidopsis thaliana HOM05D003445 ORTHO05D004114 5.3e-11 71.6 74 51.4
Hund22304 Selenicereus undatus HOM05D003445 ORTHO05D004114 5.3e-11 71.6 76 55.3
Medtr1g090773 Medicago truncatula HOM05D003445 ORTHO05D004114 6.9e-11 71.2 84 50.0
SalBow6G4419 Salvia bowleyana HOM05D003445 ORTHO05D004114 6.9e-11 71.2 75 53.3
THA.LOC104816445 Tarenaya hassleriana HOM05D003445 ORTHO05D004114 6.9e-11 71.2 86 46.5
Carub.0006s0337 Capsella rubella HOM05D003445 ORTHO05D004114 9.0e-11 70.9 106 41.5
Cpa.g.sc53.166 Carica papaya HOM05D003445 ORTHO05D004114 9.0e-11 70.9 77 55.8
AUR62041269 Chenopodium quinoa HOM05D003445 ORTHO05D004114 9.0e-11 70.9 71 56.3
AUR62041795 Chenopodium quinoa HOM05D003445 ORTHO05D004114 9.0e-11 70.9 71 56.3
HanXRQChr08g0218311 Helianthus annuus HOM05D003445 ORTHO05D004114 9.0e-11 70.9 85 47.1
Atru.chr12.903 Acer truncatum HOM05D003445 ORTHO05D004114 1.2e-10 70.5 86 47.7
Actinidia34789 Actinidia chinensis HOM05D003445 ORTHO05D004114 1.2e-10 70.5 74 51.4
Actinidia38891 Actinidia chinensis HOM05D003445 ORTHO05D004114 1.2e-10 70.5 74 51.4
MSTRG.27501 Avicennia marina HOM05D003445 ORTHO05D004114 1.2e-10 70.5 75 50.7
BcaB05g21762 Brassica carinata HOM05D003445 ORTHO05D004114 1.2e-10 70.5 74 50.0
C02p01930 Brassica napus HOM05D003445 ORTHO05D004114 1.2e-10 70.5 74 50.0
BolC2t06150H Brassica oleracea HOM05D003445 ORTHO05D004114 1.2e-10 70.5 74 50.0
Psat6g173360 Pisum sativum HOM05D003445 ORTHO05D004114 1.2e-10 70.5 84 50.0
Sp6g38310 Schrenkiella parvula HOM05D003445 ORTHO05D004114 1.2e-10 70.5 74 50.0
Sed0007053 Sechium edule HOM05D003445 ORTHO05D004114 1.2e-10 70.5 75 57.3
Aa31LG11G5300 Aethionema arabicum HOM05D003445 ORTHO05D004114 1.5e-10 70.1 108 38.9
MSTRG.8120 Avicennia marina HOM05D003445 ORTHO05D004114 1.5e-10 70.1 75 53.3
BcaC03g12945 Brassica carinata HOM05D003445 ORTHO05D004114 1.5e-10 70.1 74 48.6
CiPaw.02G170100 Carya illinoinensis HOM05D003445 ORTHO05D004114 1.5e-10 70.1 74 51.4
ECA233G3917 Erigeron canadensis HOM05D003445 ORTHO05D004114 1.5e-10 70.1 109 41.3
TAR369G0057 Trochodendron aralioides HOM05D003445 ORTHO05D004114 1.5e-10 70.1 74 51.4
MELO3C012385.2 Cucumis melo HOM05D003445 ORTHO05D004114 2.0e-10 69.7 75 56.0
Thhalv10014068m.g Eutrema salsugineum HOM05D003445 ORTHO05D004114 2.0e-10 69.7 74 52.7
Rhsim09G0145400 Rhododendron simsii HOM05D003445 ORTHO05D004114 2.0e-10 69.7 74 51.4
BcaC06g32151 Brassica carinata HOM05D003445 ORTHO05D004114 2.6e-10 69.3 75 50.7
BraA02t04812Z Brassica rapa HOM05D003445 ORTHO05D004114 2.6e-10 69.3 74 48.6
CsaV3_5G035820 Cucumis sativus L. HOM05D003445 ORTHO05D004114 2.6e-10 69.3 76 55.3
THA.LOC104826969 Tarenaya hassleriana HOM05D003445 ORTHO05D004114 2.6e-10 69.3 74 47.3
Prupe.2G093900 Prunus persica HOM05D003445 ORTHO05D004114 3.4e-10 68.9 75 56.0
COL.COLO4_02905 Corchorus olitorius HOM05D003445 ORTHO05D004114 5.8e-10 68.2 74 52.7
Lalb_Chr06g0170031 Lupinus albus HOM05D003445 ORTHO05D004114 5.8e-10 68.2 84 47.6
Cc02_g10580 Coffea canephora HOM05D003445 ORTHO05D004114 7.6e-10 67.8 80 48.8
Lj5g0011720 Lotus japonicus HOM05D003445 ORTHO05D004114 7.6e-10 67.8 84 48.8
PSO339G2738 Papaver somniferum HOM05D003445 ORTHO05D004114 9.9e-10 67.4 87 49.4
arahy.Tifrunner.gnm1.ann1.2WVS1U Arachis hypogaea HOM05D003445 ORTHO05D004114 1.3e-09 67.0 82 52.4
arahy.Tifrunner.gnm1.ann1.68AZQV Arachis hypogaea HOM05D003445 ORTHO05D004114 1.3e-09 67.0 82 52.4
Duzib114G0852 Durio zibethinus HOM05D003445 ORTHO05D004114 1.3e-09 67.0 74 51.4
Lalb_Chr02g0151111 Lupinus albus HOM05D003445 ORTHO05D004114 1.3e-09 67.0 83 47.0
Nitab4.5_0002692g0090 Nicotiana tabacum HOM05D003445 ORTHO05D004114 1.3e-09 67.0 73 52.1
THA.LOC104823197 Tarenaya hassleriana HOM05D003445 ORTHO05D004114 1.3e-09 67.0 74 44.6
Nitab4.5_0010505g0010 Nicotiana tabacum HOM05D003445 ORTHO05D004114 2.2e-09 66.2 74 52.7
Potri.010G230500 Populus trichocarpa HOM05D003445 ORTHO05D004114 2.2e-09 66.2 74 48.6
BcaB01g05898 Brassica carinata HOM05D003445 ORTHO05D004114 2.9e-09 65.9 74 48.6
A03p01680 Brassica napus HOM05D003445 ORTHO05D004114 2.9e-09 65.9 74 48.6
C03p02050 Brassica napus HOM05D003445 ORTHO05D004114 2.9e-09 65.9 74 48.6
BolC3t12758H Brassica oleracea HOM05D003445 ORTHO05D004114 2.9e-09 65.9 74 48.6
BraA03t09543Z Brassica rapa HOM05D003445 ORTHO05D004114 2.9e-09 65.9 74 48.6
Gorai.011G234000 Gossypium raimondii HOM05D003445 ORTHO05D004114 2.9e-09 65.9 74 48.6
MD02G1237900 Malus domestica HOM05D003445 ORTHO05D004114 2.9e-09 65.9 75 50.7
MD02G1241800 Malus domestica HOM05D003445 ORTHO05D004114 2.9e-09 65.9 75 50.7
Oeu060277.5 Olea europaea HOM05D003445 ORTHO05D004114 3.8e-09 65.5 76 46.1
PSO063G2817 Papaver somniferum HOM05D003445 ORTHO05D004114 3.8e-09 65.5 87 48.3
PGR142G3968 Punica granatum HOM05D003445 ORTHO05D004114 3.8e-09 65.5 74 54.1
TWI38G0253 Tripterygium wilfordii HOM05D003445 ORTHO05D004114 3.8e-09 65.5 78 46.2
CDE06G1707 Ceratophyllum demersum HOM05D003445 ORTHO05D004114 4.9e-09 65.1 84 45.2
TPR.G37741 Trifolium pratense HOM05D003445 ORTHO05D004114 4.9e-09 65.1 85 49.4
A10p31650 Brassica napus HOM05D003445 ORTHO05D004114 6.4e-09 64.7 75 48.0
C09p72320 Brassica napus HOM05D003445 ORTHO05D004114 6.4e-09 64.7 75 48.0
BolC9t59976H Brassica oleracea HOM05D003445 ORTHO05D004114 6.4e-09 64.7 75 48.0
BraA10t45211Z Brassica rapa HOM05D003445 ORTHO05D004114 6.4e-09 64.7 75 48.0
unitig_736.g22325 Utricularia gibba HOM05D003445 ORTHO05D004114 6.4e-09 64.7 101 40.6
unitig_899.g15058 Utricularia gibba HOM05D003445 ORTHO05D004114 6.4e-09 64.7 75 46.7
CARHR208830 Cardamine hirsuta HOM05D003445 ORTHO05D004114 8.4e-09 64.3 74 47.3
FAN10G3468 Fragaria x ananassa HOM05D003445 ORTHO05D004114 8.4e-09 64.3 81 48.1
Oeu060276.1 Olea europaea HOM05D003445 ORTHO05D004114 8.4e-09 64.3 74 48.6
Potri.008G030700 Populus trichocarpa HOM05D003445 ORTHO05D004114 8.4e-09 64.3 74 50.0
Sabra10G0178800 Salix brachista HOM05D003445 ORTHO05D004114 8.4e-09 64.3 74 48.6
CiPaw.01G265300 Carya illinoinensis HOM05D003445 ORTHO05D004114 1.1e-08 63.9 74 51.4
Nitab4.5_0000096g0210 Nicotiana tabacum HOM05D003445 ORTHO05D004114 1.1e-08 63.9 73 50.7
Sabra08G0020500 Salix brachista HOM05D003445 ORTHO05D004114 1.1e-08 63.9 74 50.0
TWI15G0156 Tripterygium wilfordii HOM05D003445 ORTHO05D004114 1.1e-08 63.9 80 46.2
Gohir.A06G168900 Gossypium hirsutum HOM05D003445 ORTHO05D004114 1.4e-08 63.5 73 49.3
Gohir.D06G176400 Gossypium hirsutum HOM05D003445 ORTHO05D004114 1.4e-08 63.5 73 49.3
Gorai.010G207600 Gossypium raimondii HOM05D003445 ORTHO05D004114 1.4e-08 63.5 73 49.3
HanXRQChr14g0456171 Helianthus annuus HOM05D003445 ORTHO05D004114 1.4e-08 63.5 78 47.4
MD07G1074100 Malus domestica HOM05D003445 ORTHO05D004114 1.4e-08 63.5 75 49.3
Gohir.A10G200400 Gossypium hirsutum HOM05D003445 ORTHO05D004114 1.9e-08 63.2 74 48.6
Solyc09g150121.1 Solanum lycopersicum HOM05D003445 ORTHO05D004114 1.9e-08 63.2 75 49.3
Solyc11g007940.2 Solanum lycopersicum HOM05D003445 ORTHO05D004114 1.9e-08 63.2 75 49.3
Sopen11g003810 Solanum pennellii HOM05D003445 ORTHO05D004114 1.9e-08 63.2 75 49.3
Aqoxy2G01633 Aquilegia oxysepala HOM05D003445 ORTHO05D004114 2.4e-08 62.8 84 48.8
Nn3g19092 Nelumbo nucifera HOM05D003445 ORTHO05D004114 2.4e-08 62.8 76 48.7
PGSC0003DMG400023482 Solanum tuberosum HOM05D003445 ORTHO05D004114 2.4e-08 62.8 73 49.3
Thecc.10G089500 Theobroma cacao HOM05D003445 ORTHO05D004114 2.4e-08 62.8 74 50.0
TWI63G1099 Tripterygium wilfordii HOM05D003445 ORTHO05D004114 2.4e-08 62.8 80 45.0
Duzib128G1656 Durio zibethinus HOM05D003445 ORTHO05D004114 3.2e-08 62.4 74 45.9
Gohir.A05G291200 Gossypium hirsutum HOM05D003445 ORTHO05D004114 3.2e-08 62.4 74 45.9
Gohir.D05G292300 Gossypium hirsutum HOM05D003445 ORTHO05D004114 3.2e-08 62.4 74 45.9
Gohir.D10G208300 Gossypium hirsutum HOM05D003445 ORTHO05D004114 3.2e-08 62.4 74 48.6
Gorai.009G308500 Gossypium raimondii HOM05D003445 ORTHO05D004114 3.2e-08 62.4 74 45.9
RcHm_v2.0_Chr1g0335271 Rosa chinensis HOM05D003445 ORTHO05D004114 3.2e-08 62.4 79 48.1
Solyc05g055450.3 Solanum lycopersicum HOM05D003445 ORTHO05D004114 4.2e-08 62.0 74 50.0
CDE03G0484 Ceratophyllum demersum HOM05D003445 ORTHO05D004114 5.4e-08 61.6 95 43.2
Peaxi162Scf00409g00218 Petunia axillaris HOM05D003445 ORTHO05D004114 5.4e-08 61.6 73 49.3
FAN01G0566 Fragaria x ananassa HOM05D003445 ORTHO05D004114 7.1e-08 61.2 81 49.4
FAN06G2771 Fragaria x ananassa HOM05D003445 ORTHO05D004114 7.1e-08 61.2 81 49.4
Sopen05g033900 Solanum pennellii HOM05D003445 ORTHO05D004114 1.2e-07 60.5 74 48.6
PGSC0003DMG400027335 Solanum tuberosum HOM05D003445 ORTHO05D004114 1.2e-07 60.5 75 48.0
CDE08G1488 Ceratophyllum demersum HOM05D003445 ORTHO05D004114 1.6e-07 60.1 91 42.9
FAN03G1234 Fragaria x ananassa HOM05D003445 ORTHO05D004114 2.1e-07 59.7 81 46.9
Lalb_Chr01g0010281 Lupinus albus HOM05D003445 ORTHO05D004114 3.5e-07 58.9 83 45.8
CAN.G1891.4 Capsicum annuum HOM05D003445 ORTHO05D004114 6.0e-07 58.2 86 40.7
ClCG05G021420 Citrullus lanatus HOM05D003445 ORTHO05D004114 6.0e-07 58.2 95 44.2
SEGI_38080 Sequoiadendron giganteum HOM05D003445 ORTHO05D004114 1.0e-06 57.4 82 42.7
Lalb_Chr19g0129371 Lupinus albus HOM05D003445 ORTHO05D004114 2.3e-06 56.2 77 45.5
Peaxi162Scf00253g00318 Petunia axillaris HOM05D003445 ORTHO05D004114 3.9e-06 55.5 40 67.5
Sed0013139 Sechium edule HOM05D003445 ORTHO05D004114 6.6e-06 54.7 63 54.0
BcaNung04621 Brassica carinata HOM05D003445 ORTHO05D004114 8.7e-06 54.3 40 62.5


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