Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063702.1 Olea europaea HOM05D003684 ORTHO05D004428 0.0e+00 1614.0 823 100.0
Migut.M00001 Erythranthe guttata HOM05D003684 ORTHO05D004428 1.6e-309 1065.8 835 68.6
SGA_v2.0_scaffold12G06270 Striga asiatica HOM05D003684 ORTHO05D004428 2.2e-298 1028.9 840 67.4
MSTRG.23231 Avicennia marina HOM05D003684 ORTHO05D004428 1.9e-294 1015.8 826 66.6
Dinv26831 Davidia involucrata HOM05D003684 ORTHO05D004428 2.5e-294 1015.4 791 68.0
Sopen05g034730 Solanum pennellii HOM05D003684 ORTHO05D004428 8.6e-287 990.3 827 64.8
Solyc05g056340.3 Solanum lycopersicum HOM05D003684 ORTHO05D004428 9.6e-286 986.9 828 64.6
CAN.G1156.25 Capsicum annuum HOM05D003684 ORTHO05D004428 8.9e-284 980.3 874 61.4
Duzib213G0690 Durio zibethinus HOM05D003684 ORTHO05D004428 1.4e-281 973.0 835 63.8
TAR381G1133 Trochodendron aralioides HOM05D003684 ORTHO05D004428 1.9e-278 962.6 828 62.2
Gorai.002G106900 Gossypium raimondii HOM05D003684 ORTHO05D004428 2.0e-275 952.6 833 63.3
Thecc.07G170900 Theobroma cacao HOM05D003684 ORTHO05D004428 9.9e-275 950.3 833 63.4
Cfa020930 Carpinus fangiana HOM05D003684 ORTHO05D004428 3.2e-273 945.3 827 62.0
RcHm_v2.0_Chr3g0485021 Rosa chinensis HOM05D003684 ORTHO05D004428 4.2e-273 944.9 827 62.4
COL.COLO4_36995 Corchorus olitorius HOM05D003684 ORTHO05D004428 1.6e-272 943.0 834 62.5
Manes.13G154400 Manihot esculenta HOM05D003684 ORTHO05D004428 2.7e-272 942.2 841 62.3
Potri.018G145560 Populus trichocarpa HOM05D003684 ORTHO05D004428 3.5e-272 941.8 834 60.9
Peaxi162Scf00819g00027 Petunia axillaris HOM05D003684 ORTHO05D004428 5.1e-271 937.9 848 62.0
Potri.T044700 Populus trichocarpa HOM05D003684 ORTHO05D004428 5.1e-271 937.9 834 60.8
Duzib187G1616 Durio zibethinus HOM05D003684 ORTHO05D004428 4.0e-268 928.3 833 62.3
Potri.004G135800 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.5e-267 926.4 836 61.4
PGR119G1631 Punica granatum HOM05D003684 ORTHO05D004428 1.1e-265 920.2 831 61.0
Sed0026164 Sechium edule HOM05D003684 ORTHO05D004428 5.4e-265 917.9 825 61.2
Phvul.007G114500 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 7.1e-265 917.5 827 60.9
Lj5g0014818 Lotus japonicus HOM05D003684 ORTHO05D004428 6.0e-264 914.4 806 61.5
CsaV3_2G019660 Cucumis sativus L. HOM05D003684 ORTHO05D004428 5.1e-263 911.4 829 60.1
FvH4_1g25880 Fragaria vesca HOM05D003684 ORTHO05D004428 1.9e-262 909.4 827 60.5
VMungo0720G1706 Vigna mungo HOM05D003684 ORTHO05D004428 2.5e-262 909.1 803 61.8
CiPaw.16G119400 Carya illinoinensis HOM05D003684 ORTHO05D004428 3.3e-262 908.7 826 60.3
Sabra04G0082300 Salix brachista HOM05D003684 ORTHO05D004428 9.6e-262 907.1 853 59.6
Glyma.10G175900 Glycine max HOM05D003684 ORTHO05D004428 2.8e-261 905.6 828 60.4
TWI31G1361 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 3.7e-261 905.2 831 59.7
Actinidia19941 Actinidia chinensis HOM05D003684 ORTHO05D004428 8.1e-261 904.0 838 61.6
Ciclev10024915m.g Citrus clementina HOM05D003684 ORTHO05D004428 6.9e-260 901.0 831 60.3
Atru.chr3.1442 Acer truncatum HOM05D003684 ORTHO05D004428 4.5e-259 898.3 828 60.0
Gohir.D01G081800 Gossypium hirsutum HOM05D003684 ORTHO05D004428 4.5e-259 898.3 725 66.1
FAN28G1615 Fragaria x ananassa HOM05D003684 ORTHO05D004428 2.2e-258 896.0 827 60.1
Gohir.A01G097200 Gossypium hirsutum HOM05D003684 ORTHO05D004428 9.3e-257 890.6 833 60.5
FAN19G3168 Fragaria x ananassa HOM05D003684 ORTHO05D004428 8.7e-255 884.0 823 59.5
Glyma.09G157300 Glycine max HOM05D003684 ORTHO05D004428 5.7e-254 881.3 832 59.4
Lalb_Chr06g0168741 Lupinus albus HOM05D003684 ORTHO05D004428 8.2e-253 877.5 839 59.5
Glyma.20G214600 Glycine max HOM05D003684 ORTHO05D004428 6.9e-252 874.4 827 58.8
Phvul.004G132300 Phaseolus vulgaris HOM05D003684 ORTHO05D004428 1.5e-251 873.2 838 58.4
FAN26G1029 Fragaria x ananassa HOM05D003684 ORTHO05D004428 1.4e-249 866.7 819 58.9
FAN23G1204 Fragaria x ananassa HOM05D003684 ORTHO05D004428 6.7e-247 857.8 827 58.4
Psat6g111880 Pisum sativum HOM05D003684 ORTHO05D004428 1.5e-246 856.7 859 57.3
Ca_09907_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 4.3e-246 855.1 849 57.4
Rhsim10G0125000 Rhododendron simsii HOM05D003684 ORTHO05D004428 6.3e-245 851.3 990 52.1
arahy.Tifrunner.gnm1.ann1.88FPG1 Arachis hypogaea HOM05D003684 ORTHO05D004428 1.4e-244 850.1 839 57.1
Glyma.16G207900 Glycine max HOM05D003684 ORTHO05D004428 2.4e-244 849.4 833 57.3
arahy.Tifrunner.gnm1.ann1.554WMS Arachis hypogaea HOM05D003684 ORTHO05D004428 2.0e-243 846.3 841 56.8
Aqoxy5G02639 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 2.5e-241 839.3 803 57.8
unitig_736.g22645 Utricularia gibba HOM05D003684 ORTHO05D004428 1.4e-239 833.6 825 57.0
MD15G1140800 Malus domestica HOM05D003684 ORTHO05D004428 3.0e-239 832.4 864 55.2
Ah.06g188290 Amaranthus hybridus HOM05D003684 ORTHO05D004428 5.1e-239 831.6 828 57.1
Lalb_Chr02g0149761 Lupinus albus HOM05D003684 ORTHO05D004428 1.1e-238 830.5 838 56.6
EL10Ac4g09714 Beta vulgaris HOM05D003684 ORTHO05D004428 3.3e-238 828.9 832 56.7
unitig_899.g14642 Utricularia gibba HOM05D003684 ORTHO05D004428 3.3e-238 828.9 825 57.8
Peaxi162Scf00353g00740 Petunia axillaris HOM05D003684 ORTHO05D004428 9.7e-238 827.4 790 61.3
Prupe.4G280600 Prunus persica HOM05D003684 ORTHO05D004428 2.4e-236 822.8 729 62.1
Lalb_Chr21g0311771 Lupinus albus HOM05D003684 ORTHO05D004428 1.5e-235 820.1 843 56.1
arahy.Tifrunner.gnm1.ann1.XFQ1DZ Arachis hypogaea HOM05D003684 ORTHO05D004428 8.5e-234 814.3 824 56.2
TWI79G1581 Tripterygium wilfordii HOM05D003684 ORTHO05D004428 7.2e-233 811.2 829 55.9
Nitab4.5_0000496g0270 Nicotiana tabacum HOM05D003684 ORTHO05D004428 6.1e-232 808.1 827 57.6
Hund21769 Selenicereus undatus HOM05D003684 ORTHO05D004428 5.1e-231 805.1 777 59.5
VMungo0464G0733 Vigna mungo HOM05D003684 ORTHO05D004428 3.7e-229 798.9 830 55.2
THA.LOC104800528 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 2.9e-226 789.3 872 53.6
Medtr1g077090 Medicago truncatula HOM05D003684 ORTHO05D004428 1.5e-225 786.9 841 54.3
AUR62000586 Chenopodium quinoa HOM05D003684 ORTHO05D004428 5.7e-222 775.0 842 53.9
Medtr6g065070 Medicago truncatula HOM05D003684 ORTHO05D004428 1.7e-221 773.5 772 57.1
Ca_25251_v3 Cicer arietinum L. HOM05D003684 ORTHO05D004428 4.8e-221 771.9 828 53.7
Aa31LG3G18080 Aethionema arabicum HOM05D003684 ORTHO05D004428 1.2e-219 767.3 879 51.9
vmacro12735 Vaccinium macrocarpon HOM05D003684 ORTHO05D004428 3.8e-218 762.3 1054 46.5
CARHR204550 Cardamine hirsuta HOM05D003684 ORTHO05D004428 4.2e-217 758.8 826 53.6
Lj2g0008338 Lotus japonicus HOM05D003684 ORTHO05D004428 4.7e-216 755.4 829 53.7
AL6G18920 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 5.2e-215 751.9 673 60.9
Nitab4.5_0006957g0020 Nicotiana tabacum HOM05D003684 ORTHO05D004428 5.2e-215 751.9 810 55.7
Thhalv10012626m.g Eutrema salsugineum HOM05D003684 ORTHO05D004428 4.1e-212 742.3 923 49.3
Carub.0006s0737 Capsella rubella HOM05D003684 ORTHO05D004428 3.5e-211 739.2 833 52.8
CANSAT54G1806 Cannabis sativa HOM05D003684 ORTHO05D004428 7.7e-211 738.0 674 61.9
HanXRQChr11g0336971 Helianthus annuus HOM05D003684 ORTHO05D004428 1.2e-208 730.7 758 55.4
ClCG02G000160 Citrullus lanatus HOM05D003684 ORTHO05D004428 6.1e-208 728.4 819 52.4
AUR62006943 Chenopodium quinoa HOM05D003684 ORTHO05D004428 3.0e-207 726.1 835 52.1
THA.LOC104818396 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 6.8e-207 724.9 839 52.7
TPR.G40356 Trifolium pratense HOM05D003684 ORTHO05D004428 9.8e-206 721.1 816 52.5
Os07g0477500 Oryza sativa ssp. japonica HOM05D003684 ORTHO05D004428 4.9e-205 718.8 828 51.4
Oeu034403.1 Olea europaea HOM05D003684 ORTHO05D004428 4.5e-203 712.2 469 80.8
MSTRG.2470 Avicennia marina HOM05D003684 ORTHO05D004428 3.8e-202 709.1 612 63.7
BcaB01g05594 Brassica carinata HOM05D003684 ORTHO05D004428 6.6e-202 708.4 810 52.7
AT5G08450 Arabidopsis thaliana HOM05D003684 ORTHO05D004428 4.3e-201 705.7 835 51.3
Sp6g34450 Schrenkiella parvula HOM05D003684 ORTHO05D004428 1.2e-200 704.1 822 51.1
HPP92_003712 Vanilla planifolia HOM05D003684 ORTHO05D004428 1.6e-200 703.7 827 50.2
ECA248G2431 Erigeron canadensis HOM05D003684 ORTHO05D004428 4.7e-200 702.2 828 51.2
TPR.G16631 Trifolium pratense HOM05D003684 ORTHO05D004428 7.0e-196 688.3 557 65.5
CiPaw.15G185900 Carya illinoinensis HOM05D003684 ORTHO05D004428 1.6e-195 687.2 541 66.9
Lsat_1_v5_gn_1_130380 Lactuca sativa HOM05D003684 ORTHO05D004428 2.7e-195 686.4 840 51.5
GSVIVG01000253001 Vitis vinifera HOM05D003684 ORTHO05D004428 1.1e-193 681.0 466 74.5
C03p04350 Brassica napus HOM05D003684 ORTHO05D004428 6.2e-192 675.2 918 48.1
BraA03t09733Z Brassica rapa HOM05D003684 ORTHO05D004428 1.8e-191 673.7 830 50.6
BolC3t12968H Brassica oleracea HOM05D003684 ORTHO05D004428 3.1e-191 672.9 915 48.2
A03p03860 Brassica napus HOM05D003684 ORTHO05D004428 6.8e-191 671.8 816 51.1
CDE08G0027 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 7.5e-190 668.3 812 48.0
Zm00001eb178520 Zea mays HOM05D003684 ORTHO05D004428 1.0e-186 657.9 809 48.9
Zm00001eb108610 Zea mays HOM05D003684 ORTHO05D004428 2.8e-184 649.8 829 48.9
PSO170G2972 Papaver somniferum HOM05D003684 ORTHO05D004428 2.0e-182 643.7 924 44.9
PSO782G3749 Papaver somniferum HOM05D003684 ORTHO05D004428 4.9e-181 639.0 924 44.7
Potri.T044400 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.4e-180 637.5 649 56.4
DCAR_009623 Daucus carota HOM05D003684 ORTHO05D004428 1.1e-177 627.9 414 76.1
Psat0s3859g0040 Pisum sativum HOM05D003684 ORTHO05D004428 1.2e-171 607.8 798 47.6
SalBow8G3946 Salvia bowleyana HOM05D003684 ORTHO05D004428 1.3e-165 587.8 405 72.8
Nn1g08436 Nelumbo nucifera HOM05D003684 ORTHO05D004428 5.8e-158 562.4 674 51.0
Cpa.g.sc138.52 Carica papaya HOM05D003684 ORTHO05D004428 7.6e-158 562.0 389 72.5
Sabra19G0000700 Salix brachista HOM05D003684 ORTHO05D004428 2.1e-155 553.9 359 74.9
Oeu034404.1 Olea europaea HOM05D003684 ORTHO05D004428 6.0e-155 552.4 298 91.6
Sc09g0001960 Simmondsia chinensis HOM05D003684 ORTHO05D004428 1.1e-153 548.1 342 78.1
AL6G19100 Arabidopsis lyrata HOM05D003684 ORTHO05D004428 4.8e-152 542.7 1094 37.8
Sabra19G0012100 Salix brachista HOM05D003684 ORTHO05D004428 2.4e-151 540.4 359 74.1
Cc07_g19760 Coffea canephora HOM05D003684 ORTHO05D004428 8.4e-149 531.9 343 76.7
BcaB08g37259 Brassica carinata HOM05D003684 ORTHO05D004428 2.3e-146 523.9 448 61.6
BraA10t44878Z Brassica rapa HOM05D003684 ORTHO05D004428 2.8e-144 516.9 361 70.9
C09p68560 Brassica napus HOM05D003684 ORTHO05D004428 1.5e-142 511.1 383 67.1
Sc06g0005260 Simmondsia chinensis HOM05D003684 ORTHO05D004428 2.6e-142 510.4 527 52.8
SHI11408 Sapria himalayana HOM05D003684 ORTHO05D004428 3.3e-137 493.4 824 43.2
Actinidia36575 Actinidia chinensis HOM05D003684 ORTHO05D004428 1.8e-135 487.6 412 63.6
ATR1136G078 Amborella trichopoda HOM05D003684 ORTHO05D004428 4.1e-135 486.5 352 67.6
A10p28300 Brassica napus HOM05D003684 ORTHO05D004428 6.9e-135 485.7 386 64.8
DCAR_019948 Daucus carota HOM05D003684 ORTHO05D004428 5.0e-133 479.6 421 59.1
HPP92_003711 Vanilla planifolia HOM05D003684 ORTHO05D004428 3.7e-128 463.4 661 45.8
BolC9t59599H Brassica oleracea HOM05D003684 ORTHO05D004428 1.0e-125 455.3 374 64.2
Lj2C616G3 Lonicera japonica HOM05D003684 ORTHO05D004428 1.1e-121 441.8 319 70.2
PGSC0003DMG400023330 Solanum tuberosum HOM05D003684 ORTHO05D004428 5.7e-121 439.5 468 55.6
SMO356G0426 Selaginella moellendorffii HOM05D003684 ORTHO05D004428 3.4e-118 430.3 404 56.7
Pp3c3_32800 Physcomitrium patens HOM05D003684 ORTHO05D004428 4.5e-118 429.9 430 52.3
MBI03_g18673_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 7.2e-116 422.5 277 73.6
HPP92_007640 Vanilla planifolia HOM05D003684 ORTHO05D004428 8.2e-112 409.1 734 38.1
Pp3c8_5360 Physcomitrium patens HOM05D003684 ORTHO05D004428 2.4e-111 407.5 545 44.8
Lj2C616T2 Lonicera japonica HOM05D003684 ORTHO05D004428 8.5e-109 399.1 584 48.8
Pp3c3_30960 Physcomitrium patens HOM05D003684 ORTHO05D004428 1.1e-108 398.7 436 48.6
Potri.018G145546 Populus trichocarpa HOM05D003684 ORTHO05D004428 5.9e-102 376.3 241 77.2
CSS0015943 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 7.7e-102 375.9 486 50.6
Haze_19362 Corylus avellana HOM05D003684 ORTHO05D004428 2.2e-101 374.4 480 48.5
AagrBONN_evm.TU.Sc2ySwM_228.5259 Anthoceros agrestis HOM05D003684 ORTHO05D004428 4.7e-99 366.7 439 48.1
Mapoly0050s0019 Marchantia polymorpha HOM05D003684 ORTHO05D004428 4.8e-96 356.7 749 35.6
SGA_v2.0_scaffold51G18855 Striga asiatica HOM05D003684 ORTHO05D004428 1.1e-95 355.5 432 48.6
MELO3C023205.2 Cucumis melo HOM05D003684 ORTHO05D004428 5.2e-90 336.7 467 45.4
DCAR_009622 Daucus carota HOM05D003684 ORTHO05D004428 3.1e-87 327.4 424 47.9
MSTRG.2469 Avicennia marina HOM05D003684 ORTHO05D004428 1.5e-84 318.5 197 79.7
CDE02G3206 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 3.0e-82 310.8 591 37.6
Sabra19G0011700 Salix brachista HOM05D003684 ORTHO05D004428 8.9e-82 309.3 482 44.2
Cpa.g.sc138.51 Carica papaya HOM05D003684 ORTHO05D004428 1.2e-78 298.9 382 49.0
CBR_g645 Chara braunii HOM05D003684 ORTHO05D004428 7.3e-76 289.7 318 47.2
CSS0049380 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 4.0e-74 283.9 264 59.5
Potri.018G145542 Populus trichocarpa HOM05D003684 ORTHO05D004428 2.4e-71 274.6 372 47.0
Ciclev10026566m.g Citrus clementina HOM05D003684 ORTHO05D004428 4.6e-70 270.4 189 72.5
CDE02G3840 Ceratophyllum demersum HOM05D003684 ORTHO05D004428 1.7e-64 251.9 183 65.6
Cre03.g182600 Chlamydomonas reinhardtii HOM05D003684 ORTHO05D004428 1.7e-61 241.9 311 42.1
Sc09g0001970 Simmondsia chinensis HOM05D003684 ORTHO05D004428 3.9e-61 240.7 471 42.9
MCO05G109 Micromonas commoda HOM05D003684 ORTHO05D004428 7.3e-60 236.5 430 35.1
Cc07_g19750 Coffea canephora HOM05D003684 ORTHO05D004428 2.6e-57 228.0 185 64.3
HanXRQChr01g0009441 Helianthus annuus HOM05D003684 ORTHO05D004428 7.6e-57 226.5 178 63.5
ATR1136G068 Amborella trichopoda HOM05D003684 ORTHO05D004428 8.4e-56 223.0 431 39.0
MBI01_g42406_MAGBIO Magnolia biondii HOM05D003684 ORTHO05D004428 7.8e-54 216.5 151 67.5
Cc07_g19740 Coffea canephora HOM05D003684 ORTHO05D004428 2.4e-47 194.9 148 66.9
Mapoly0024s0027 Marchantia polymorpha HOM05D003684 ORTHO05D004428 7.8e-46 189.9 456 32.9
Aqoxy391s001 Aquilegia oxysepala HOM05D003684 ORTHO05D004428 2.3e-45 188.3 101 90.1
PRCOL_00004531 Prasinoderma coloniale HOM05D003684 ORTHO05D028742 1.6e-43 182.2 318 35.8
Cc00_g24540 Coffea canephora HOM05D003684 ORTHO05D004428 2.1e-35 155.2 85 84.7
HanXRQChr17g0567611 Helianthus annuus HOM05D003684 ORTHO05D004428 1.6e-22 112.5 63 82.5
Lsat_1_v5_gn_6_89680 Lactuca sativa HOM05D003684 ORTHO05D004428 7.9e-22 110.2 216 38.0
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 1.0e-21 109.8 168 44.6
TPR.G16635 Trifolium pratense HOM05D003684 ORTHO05D004428 1.8e-21 109.0 237 38.4
Sabra01G0044800 Salix brachista HOM05D003684 ORTHO05D004428 8.7e-21 106.7 65 78.5
SEGI_34739 Sequoiadendron giganteum HOM05D003684 ORTHO05D004428 9.7e-20 103.2 96 57.3
CSS0003103 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 3.7e-19 101.3 66 74.2
CSS0033146 Camellia sinensis var. sinensis HOM05D003684 ORTHO05D004428 5.0e-16 90.9 58 69.0
arahy.Tifrunner.gnm1.ann1.32AA53 Arachis hypogaea HOM05D003684 ORTHO05D001254 3.1e-10 71.6 52 67.3
EL10Ac2g03383 Beta vulgaris HOM05D000039 ORTHO05D001729 1.2e-09 69.7 59 61.0
EL10Ac9g22716 Beta vulgaris HOM05D003684 ORTHO05D004428 2.0e-09 68.9 50 66.0
Ciclev10003442m.g Citrus clementina HOM05D003684 ORTHO05D004428 5.9e-09 67.4 47 74.5
Potri.018G145552 Populus trichocarpa HOM05D003684 ORTHO05D004428 1.0e-08 66.6 47 74.5
Ciclev10003579m.g Citrus clementina HOM05D003684 ORTHO05D004428 5.0e-08 64.3 56 62.5


User provided reference genes

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