Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063204.2 Olea europaea HOM05D003334 ORTHO05D004076 3.7e-82 308.1 154 100.0
Oeu044972.2 Olea europaea HOM05D003334 ORTHO05D004076 8.5e-79 297.0 152 96.7
GSVIVG01020576001 Vitis vinifera HOM05D003334 ORTHO05D004076 2.5e-78 295.4 154 93.5
SGA_v2.0_scaffold269G46296 Striga asiatica HOM05D003334 ORTHO05D004076 9.4e-78 293.5 154 93.5
SGA_v2.0_scaffold447G51751 Striga asiatica HOM05D003334 ORTHO05D004076 9.4e-78 293.5 154 93.5
Dinv04743 Davidia involucrata HOM05D003334 ORTHO05D004076 3.6e-77 291.6 154 92.9
Hund21749 Selenicereus undatus HOM05D003334 ORTHO05D004076 3.6e-77 291.6 154 91.6
Dinv27617 Davidia involucrata HOM05D003334 ORTHO05D004076 6.1e-77 290.8 154 92.9
MSTRG.11832 Avicennia marina HOM05D003334 ORTHO05D004076 1.0e-76 290.0 154 91.6
Actinidia29400 Actinidia chinensis HOM05D003334 ORTHO05D004076 2.3e-76 288.9 154 91.6
CSS0022391 Camellia sinensis var. sinensis HOM05D003334 ORTHO05D004076 6.8e-76 287.3 154 91.6
Migut.E01397 Erythranthe guttata HOM05D003334 ORTHO05D004076 3.4e-75 285.0 154 89.0
Rhsim12G0003500 Rhododendron simsii HOM05D003334 ORTHO05D004076 9.8e-75 283.5 154 90.3
unitig_32.g11639 Utricularia gibba HOM05D003334 ORTHO05D004076 9.8e-75 283.5 154 90.3
TAR636G1778 Trochodendron aralioides HOM05D003334 ORTHO05D004076 1.3e-74 283.1 154 89.6
Sc06g0005190 Simmondsia chinensis HOM05D003334 ORTHO05D004076 2.2e-74 282.3 154 89.6
CSS0036286 Camellia sinensis var. sinensis HOM05D003334 ORTHO05D004076 3.7e-74 281.6 154 90.3
Duzib170G0367 Durio zibethinus HOM05D003334 ORTHO05D004076 3.7e-74 281.6 154 88.3
Hma1.2p1_0123F.1_g058080 Hydrangea macrophylla HOM05D003334 ORTHO05D004076 3.7e-74 281.6 154 89.6
CANSAT54G0453 Cannabis sativa HOM05D003334 ORTHO05D004076 1.1e-73 280.0 154 88.3
Nn1g02302 Nelumbo nucifera HOM05D003334 ORTHO05D004076 1.1e-73 280.0 154 89.6
CiPaw.07G196900 Carya illinoinensis HOM05D003334 ORTHO05D004076 1.8e-73 279.3 154 88.3
ClCG09G011880 Citrullus lanatus HOM05D003334 ORTHO05D004076 3.1e-73 278.5 154 89.0
Thecc.09G264900 Theobroma cacao HOM05D003334 ORTHO05D004076 4.1e-73 278.1 154 87.7
QL06p038393 Quercus lobata HOM05D003334 ORTHO05D004076 5.4e-73 277.7 153 88.2
TAR365G0738 Trochodendron aralioides HOM05D003334 ORTHO05D004076 7.0e-73 277.3 151 89.4
Gohir.D09G101200 Gossypium hirsutum HOM05D003334 ORTHO05D004076 9.1e-73 276.9 154 87.0
Gorai.006G118600 Gossypium raimondii HOM05D003334 ORTHO05D004076 9.1e-73 276.9 154 87.0
Solyc08g074410.4 Solanum lycopersicum HOM05D003334 ORTHO05D004076 1.2e-72 276.6 154 85.7
Sopen08g023060 Solanum pennellii HOM05D003334 ORTHO05D004076 1.2e-72 276.6 154 85.7
Sed0023632 Sechium edule HOM05D003334 ORTHO05D004076 1.6e-72 276.2 154 87.7
arahy.Tifrunner.gnm1.ann1.GB3JX0 Arachis hypogaea HOM05D003334 ORTHO05D004076 2.0e-72 275.8 154 86.4
ECA238G1984 Erigeron canadensis HOM05D003334 ORTHO05D004076 4.5e-72 274.6 154 86.4
AUR62009179 Chenopodium quinoa HOM05D003334 ORTHO05D004076 5.9e-72 274.2 154 84.4
Manes.12G077800 Manihot esculenta HOM05D003334 ORTHO05D004076 7.7e-72 273.9 154 86.4
AL3G14620 Arabidopsis lyrata HOM05D003334 ORTHO05D004076 1.3e-71 273.1 154 87.7
Gohir.A09G104500 Gossypium hirsutum HOM05D003334 ORTHO05D004076 1.3e-71 273.1 154 85.7
QL01p002104 Quercus lobata HOM05D003334 ORTHO05D004076 1.3e-71 273.1 153 86.9
AT3G04600 Arabidopsis thaliana HOM05D003334 ORTHO05D004076 1.7e-71 272.7 154 87.0
HanXRQChr17g0559071 Helianthus annuus HOM05D003334 ORTHO05D004076 2.9e-71 271.9 154 87.0
THA.LOC104821663 Tarenaya hassleriana HOM05D003334 ORTHO05D004076 2.9e-71 271.9 154 86.4
Thhalv10020864m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 3.8e-71 271.6 154 85.7
AUR62005286 Chenopodium quinoa HOM05D003334 ORTHO05D004076 6.5e-71 270.8 154 83.1
THA.LOC104802839 Tarenaya hassleriana HOM05D003334 ORTHO05D004076 8.5e-71 270.4 154 86.4
Carub.0003s0375 Capsella rubella HOM05D003334 ORTHO05D004076 1.1e-70 270.0 154 86.4
BcaC09g47791 Brassica carinata HOM05D003334 ORTHO05D004076 1.5e-70 269.6 154 85.7
CARHR078790 Cardamine hirsuta HOM05D003334 ORTHO05D004076 1.5e-70 269.6 154 85.1
Ca_14800_v3 Cicer arietinum L. HOM05D003334 ORTHO05D004076 1.5e-70 269.6 154 84.4
Atru.chr7.238 Acer truncatum HOM05D003334 ORTHO05D004076 1.9e-70 269.2 154 85.7
Lalb_Chr21g0312861 Lupinus albus HOM05D003334 ORTHO05D004076 1.9e-70 269.2 154 84.4
RcHm_v2.0_Chr7g0223011 Rosa chinensis HOM05D003334 ORTHO05D004076 2.5e-70 268.9 154 85.1
BcaB04g21362 Brassica carinata HOM05D003334 ORTHO05D004076 3.2e-70 268.5 154 85.1
Glyma.13G008200 Glycine max HOM05D003334 ORTHO05D004076 3.2e-70 268.5 154 83.1
TPR.G5320 Trifolium pratense HOM05D003334 ORTHO05D004076 4.2e-70 268.1 154 83.8
Psat4g222840 Pisum sativum HOM05D003334 ORTHO05D004076 5.5e-70 267.7 154 83.8
Ciclev10008518m.g Citrus clementina HOM05D003334 ORTHO05D004076 7.2e-70 267.3 154 85.7
Psat2g164840 Pisum sativum HOM05D003334 ORTHO05D004076 7.2e-70 267.3 154 83.8
BcaB04g19317 Brassica carinata HOM05D003334 ORTHO05D004076 9.4e-70 266.9 154 85.1
FvH4_4g11950 Fragaria vesca HOM05D003334 ORTHO05D004076 9.4e-70 266.9 154 84.4
FAN12G4063 Fragaria x ananassa HOM05D003334 ORTHO05D004076 9.4e-70 266.9 154 84.4
MD04G1236500 Malus domestica HOM05D003334 ORTHO05D004076 9.4e-70 266.9 154 85.1
Phvul.010G046300 Phaseolus vulgaris HOM05D003334 ORTHO05D004076 9.4e-70 266.9 154 83.1
VMungo0331G0230 Vigna mungo HOM05D003334 ORTHO05D004076 9.4e-70 266.9 154 84.4
Glyma.03G108900 Glycine max HOM05D003334 ORTHO05D004076 1.2e-69 266.5 154 82.5
RcHm_v2.0_Chr3g0493481 Rosa chinensis HOM05D003334 ORTHO05D004076 1.2e-69 266.5 154 84.4
FAN22G0185 Fragaria x ananassa HOM05D003334 ORTHO05D004076 1.6e-69 266.2 154 84.4
Eucgr.B01628 Eucalyptus grandis HOM05D003334 ORTHO05D004076 2.1e-69 265.8 154 85.1
MD12G1255800 Malus domestica HOM05D003334 ORTHO05D004076 2.1e-69 265.8 152 85.5
BolC1t05738H Brassica oleracea HOM05D003334 ORTHO05D004076 2.7e-69 265.4 156 85.3
Duzib168G1687 Durio zibethinus HOM05D003334 ORTHO05D004076 2.7e-69 265.4 154 83.1
A01p40810 Brassica napus HOM05D003334 ORTHO05D004076 3.6e-69 265.0 154 84.4
BNapus_Darmor_BZH_scaffold_78p00900 Brassica napus HOM05D003334 ORTHO05D004076 3.6e-69 265.0 154 84.4
CAN.G195.16 Capsicum annuum HOM05D003334 ORTHO05D004076 3.6e-69 265.0 154 84.4
Eucgr.B01376 Eucalyptus grandis HOM05D003334 ORTHO05D004076 3.6e-69 265.0 154 85.1
Aqoxy7G02117 Aquilegia oxysepala HOM05D003334 ORTHO05D004076 4.7e-69 264.6 154 84.4
A03p33670 Brassica napus HOM05D003334 ORTHO05D004076 4.7e-69 264.6 154 83.8
C03p40860 Brassica napus HOM05D003334 ORTHO05D004076 4.7e-69 264.6 154 83.8
BolC3t16362H Brassica oleracea HOM05D003334 ORTHO05D004076 4.7e-69 264.6 156 84.6
BolC3t16365H Brassica oleracea HOM05D003334 ORTHO05D004076 4.7e-69 264.6 154 83.8
FAN17G0794 Fragaria x ananassa HOM05D003334 ORTHO05D004076 4.7e-69 264.6 154 83.8
HanXRQChr11g0333651 Helianthus annuus HOM05D003334 ORTHO05D004076 4.7e-69 264.6 154 85.1
BcaC01g04366 Brassica carinata HOM05D003334 ORTHO05D004076 6.1e-69 264.2 152 84.2
BraA01t04517Z Brassica rapa HOM05D003334 ORTHO05D004076 6.1e-69 264.2 156 84.6
Lj3g0011249 Lotus japonicus HOM05D003334 ORTHO05D004076 8.0e-69 263.8 154 84.4
Oeu028097.1 Olea europaea HOM05D003334 ORTHO05D004076 8.0e-69 263.8 140 92.1
Medtr8g007305 Medicago truncatula HOM05D003334 ORTHO05D004076 1.4e-68 263.1 154 82.5
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 1.8e-68 262.7 137 92.7
PSO170G1996 Papaver somniferum HOM05D003334 ORTHO05D004076 1.8e-68 262.7 154 83.1
Ah.15g091810 Amaranthus hybridus HOM05D003334 ORTHO05D004076 2.3e-68 262.3 154 82.5
Lsat_1_v5_gn_2_16301 Lactuca sativa HOM05D003334 ORTHO05D004076 2.3e-68 262.3 154 82.5
SalBow8G4285 Salvia bowleyana HOM05D003334 ORTHO05D004076 3.0e-68 261.9 142 90.1
Aqoxy7G03650 Aquilegia oxysepala HOM05D003334 ORTHO05D004076 4.0e-68 261.5 154 84.4
BraA03t12541Z Brassica rapa HOM05D003334 ORTHO05D004076 4.0e-68 261.5 161 81.4
Prupe.7G057000 Prunus persica HOM05D003334 ORTHO05D004076 5.2e-68 261.2 154 82.5
CDE08G0778 Ceratophyllum demersum HOM05D003334 ORTHO05D004076 6.8e-68 260.8 154 82.5
Prupe.7G057800 Prunus persica HOM05D003334 ORTHO05D004076 6.8e-68 260.8 154 82.5
TWI15G0949 Tripterygium wilfordii HOM05D003334 ORTHO05D004076 6.8e-68 260.8 154 84.4
TWI34G0756 Tripterygium wilfordii HOM05D003334 ORTHO05D004076 8.8e-68 260.4 154 83.8
Aa31LG5G20570 Aethionema arabicum HOM05D003334 ORTHO05D004076 1.5e-67 259.6 162 80.9
Sp3g03440 Schrenkiella parvula HOM05D003334 ORTHO05D004076 1.5e-67 259.6 154 84.4
PSO063G6945 Papaver somniferum HOM05D003334 ORTHO05D004076 2.0e-67 259.2 152 82.9
Sabra09G0124600 Salix brachista HOM05D003334 ORTHO05D004076 7.5e-67 257.3 154 82.5
COL.COLO4_25317 Corchorus olitorius HOM05D003334 ORTHO05D004076 2.2e-66 255.8 154 83.1
MBI07_g42069_MAGBIO Magnolia biondii HOM05D003334 ORTHO05D004076 2.8e-66 255.4 137 89.8
Peaxi162Scf00213g01416 Petunia axillaris HOM05D003334 ORTHO05D004076 3.7e-66 255.0 181 73.5
Lj7A725T58 Lonicera japonica HOM05D003334 ORTHO05D004076 4.9e-66 254.6 138 90.6
Potri.009G159300 Populus trichocarpa HOM05D003334 ORTHO05D004076 4.9e-66 254.6 154 81.2
PGR119G1638 Punica granatum HOM05D003334 ORTHO05D004076 2.4e-65 252.3 154 79.2
EL10Ac4g09810 Beta vulgaris HOM05D003334 ORTHO05D004076 1.7e-63 246.1 204 63.7
Thhalv10004344m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 5.0e-63 244.6 154 77.9
vmacro00932 Vaccinium macrocarpon HOM05D003334 ORTHO05D004076 5.0e-63 244.6 137 86.9
Mapoly0053s0020 Marchantia polymorpha HOM05D003334 ORTHO05D004076 6.6e-63 244.2 154 76.0
Os12g0540900 Oryza sativa ssp. japonica HOM05D003334 ORTHO05D004076 1.1e-62 243.4 154 76.6
Zm00001eb054210 Zea mays HOM05D003334 ORTHO05D004076 1.1e-62 243.4 154 77.9
Atru.chr5.3183 Acer truncatum HOM05D003334 ORTHO05D004076 6.1e-61 237.7 148 79.1
BcaC09g48536 Brassica carinata HOM05D003334 ORTHO05D004076 5.2e-60 234.6 154 76.0
Sp6g11650 Schrenkiella parvula HOM05D003334 ORTHO05D004076 6.8e-60 234.2 154 77.9
Cfa013451 Carpinus fangiana HOM05D003334 ORTHO05D004076 1.5e-59 233.0 138 82.6
Aa31LG5G15020 Aethionema arabicum HOM05D003334 ORTHO05D004076 2.6e-59 232.3 156 75.6
arahy.Tifrunner.gnm1.ann1.L2SHRD Arachis hypogaea HOM05D003334 ORTHO05D004076 3.4e-59 231.9 165 71.5
ATR0743G002 Amborella trichopoda HOM05D003334 ORTHO05D004076 5.7e-59 231.1 143 77.6
Pp3c2_27540 Physcomitrium patens HOM05D003334 ORTHO05D004076 6.3e-58 227.6 154 72.7
Haze_07729 Corylus avellana HOM05D003334 ORTHO05D004076 5.4e-57 224.6 157 73.2
BcaB06g25549 Brassica carinata HOM05D003334 ORTHO05D004076 1.6e-56 223.0 154 72.7
PRCOL_00004976 Prasinoderma coloniale HOM05D003334 ORTHO05D004076 5.9e-56 221.1 149 71.8
BcaB04g21381 Brassica carinata HOM05D003334 ORTHO05D004076 7.8e-56 220.7 156 71.2
HPP92_011708 Vanilla planifolia HOM05D003334 ORTHO05D004076 1.1e-54 216.9 127 81.1
A07p01960 Brassica napus HOM05D003334 ORTHO05D004076 2.5e-54 215.7 154 70.8
BraA07t27995Z Brassica rapa HOM05D003334 ORTHO05D004076 2.5e-54 215.7 154 70.8
FAN07G2734 Fragaria x ananassa HOM05D003334 ORTHO05D004076 3.3e-54 215.3 164 70.1
SMO143G0103 Selaginella moellendorffii HOM05D003334 ORTHO05D004076 7.3e-54 214.2 152 71.1
Hma1.2p1_1064F.1_g253620 Hydrangea macrophylla HOM05D003334 ORTHO05D004076 9.5e-54 213.8 131 78.6
BolC7t40804H Brassica oleracea HOM05D003334 ORTHO05D004076 1.2e-53 213.4 154 70.1
Cre12.g522350 Chlamydomonas reinhardtii HOM05D003334 ORTHO05D004076 3.6e-53 211.8 148 70.9
CsaV3_5G014480 Cucumis sativus L. HOM05D003334 ORTHO05D004076 1.8e-52 209.5 114 88.6
BcaC09g47814 Brassica carinata HOM05D003334 ORTHO05D004076 2.6e-51 205.7 150 69.3
BolC1t05722H Brassica oleracea HOM05D003334 ORTHO05D004076 2.6e-51 205.7 150 69.3
SHI16564 Sapria himalayana HOM05D003334 ORTHO05D004076 3.2e-49 198.7 137 71.5
BcaB03g16657 Brassica carinata HOM05D003334 ORTHO05D004076 9.2e-49 197.2 154 66.9
BcaC01g04365 Brassica carinata HOM05D003334 ORTHO05D004076 9.2e-49 197.2 210 55.7
BNapus_Darmor_BZH_scaffold_78p01040 Brassica napus HOM05D004384 ORTHO05D005797 1.7e-47 193.0 140 69.3
Sabra04G0133700 Salix brachista HOM05D003334 ORTHO05D004076 3.0e-47 192.2 138 71.0
BraA01t04501Z Brassica rapa HOM05D004384 ORTHO05D005797 8.6e-47 190.7 140 68.6
BolC3t16384H Brassica oleracea HOM05D003334 ORTHO05D004076 1.9e-46 189.5 123 78.0
ECA233G4312 Erigeron canadensis HOM05D003334 ORTHO05D004076 2.5e-46 189.1 122 73.0
BolC3t16371H Brassica oleracea HOM05D003334 ORTHO05D004076 4.3e-46 188.3 123 78.0
AagrBONN_evm.TU.Sc2ySwM_228.5148 Anthoceros agrestis HOM05D003334 ORTHO05D004076 7.3e-46 187.6 154 64.3
BolC3t16373H Brassica oleracea HOM05D003334 ORTHO05D004076 9.5e-46 187.2 123 77.2
C03p40970 Brassica napus HOM05D003334 ORTHO05D004076 1.2e-45 186.8 123 76.4
MCO14G308 Micromonas commoda HOM05D003334 ORTHO05D004076 2.8e-45 185.7 147 61.9
Nitab4.5_0003036g0010 Nicotiana tabacum HOM05D003334 ORTHO05D004076 5.8e-43 177.9 99 84.8
Nitab4.5_0000288g0150 Nicotiana tabacum HOM05D003334 ORTHO05D004076 2.2e-42 176.0 102 82.4
TPR.G21208 Trifolium pratense HOM05D003334 ORTHO05D004076 3.7e-42 175.3 138 67.4
Thhalv10003092m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 7.8e-40 167.5 191 53.9
Haze_26816 Corylus avellana HOM05D003334 ORTHO05D004076 5.1e-39 164.9 148 56.1
CBR_g37637 Chara braunii HOM05D003334 ORTHO05D004076 5.2e-36 154.8 146 58.2
Sed0014785 Sechium edule HOM05D003334 ORTHO05D004076 1.7e-34 149.8 78 92.3
Cc02_g30090 Coffea canephora HOM05D003334 ORTHO05D004076 1.2e-27 127.1 78 78.2
Nitab4.5_0009273g0030 Nicotiana tabacum HOM05D003334 ORTHO05D004076 1.3e-26 123.6 129 55.8
SMO115G0240 Selaginella moellendorffii HOM05D003334 ORTHO05D004076 6.6e-23 111.3 132 41.7
MELO3C016671.2 Cucumis melo HOM05D003334 ORTHO05D004076 3.6e-21 105.5 53 96.2
SEGI_09752 Sequoiadendron giganteum HOM05D003334 ORTHO05D004076 8.1e-21 104.4 62 80.6
QL12p030357 Quercus lobata HOM05D003334 ORTHO05D004076 6.9e-20 101.3 91 60.4
Peaxi162Scf00020g00242 Petunia axillaris HOM05D003334 ORTHO05D004076 9.9e-19 97.4 66 69.7
C07p04090 Brassica napus HOM05D003334 ORTHO05D004076 2.2e-18 96.3 74 64.9
SEGI_19003 Sequoiadendron giganteum HOM05D003334 ORTHO05D004076 1.6e-16 90.1 59 72.9
Nitab4.5_0009273g0020 Nicotiana tabacum HOM05D003334 ORTHO05D004076 8.7e-15 84.3 48 87.5
RcHm_v2.0_Chr7g0219201 Rosa chinensis HOM05D003334 ORTHO05D004076 5.6e-14 81.6 49 83.7
Cpa.g.sc1142.2 Carica papaya HOM05D003334 ORTHO05D004076 3.6e-13 79.0 154 35.7
SMO352G0088 Selaginella moellendorffii HOM05D003334 ORTHO05D004076 1.3e-10 70.5 61 55.7
Nitab4.5_0006136g0030 Nicotiana tabacum HOM05D000111 ORTHO05D001334 2.2e-10 69.7 42 81.0
BcaC06g36447 Brassica carinata HOM05D003334 ORTHO05D000065 1.2e-08 63.9 38 81.6
Peaxi162Scf00145g00156 Petunia axillaris HOM05D003334 ORTHO05D004076 2.7e-08 62.8 40 70.0
CsaV3_5G014470 Cucumis sativus L. HOM05D003334 ORTHO05D004076 3.9e-07 58.9 29 96.6
Oeu028094.1 Olea europaea HOM05D003334 ORTHO05D290476 6.7e-07 58.2 46 67.4
PGSC0003DMG400029565 Solanum tuberosum HOM05D003334 ORTHO05D004076 7.4e-06 54.7 26 92.3


User provided reference genes

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