Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060952.2 Olea europaea HOM05D003682 ORTHO05D004224 0.0e+00 1236.1 704 100.0
Oeu025829.1 Olea europaea HOM05D003682 ORTHO05D004224 1.4e-253 879.8 633 84.5
Migut.D00421 Erythranthe guttata HOM05D003682 ORTHO05D004224 6.6e-227 791.2 706 68.1
SGA_v2.0_scaffold1G00611 Striga asiatica HOM05D003682 ORTHO05D004224 2.7e-204 716.1 692 64.7
Lj4A589T43 Lonicera japonica HOM05D003682 ORTHO05D004224 1.5e-194 683.7 705 61.3
Lj4A739G25 Lonicera japonica HOM05D003682 ORTHO05D004224 3.3e-194 682.6 706 58.6
Lj4A600T32 Lonicera japonica HOM05D003682 ORTHO05D004224 1.7e-190 670.2 706 57.4
PGSC0003DMG400009355 Solanum tuberosum HOM05D003682 ORTHO05D004224 9.3e-189 664.5 707 60.8
Solyc04g076430.3 Solanum lycopersicum HOM05D003682 ORTHO05D004224 2.7e-188 662.9 706 58.5
Nitab4.5_0000131g0160 Nicotiana tabacum HOM05D003682 ORTHO05D004224 4.6e-188 662.1 704 57.4
CAN.G475.14 Capsicum annuum HOM05D003682 ORTHO05D004224 7.9e-188 661.4 706 60.5
Sopen04g030190 Solanum pennellii HOM05D003682 ORTHO05D004224 8.1e-185 651.4 706 60.8
Actinidia19624 Actinidia chinensis HOM05D003682 ORTHO05D004224 1.8e-184 650.2 706 60.2
Nitab4.5_0006151g0030 Nicotiana tabacum HOM05D003682 ORTHO05D004224 9.0e-184 647.9 705 59.9
Cc10_g15970 Coffea canephora HOM05D003682 ORTHO05D004224 7.1e-181 638.3 703 58.6
Actinidia29628 Actinidia chinensis HOM05D003682 ORTHO05D004224 2.3e-179 633.3 705 58.9
DCAR_019320 Daucus carota HOM05D003682 ORTHO05D004224 2.4e-176 623.2 705 59.6
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 2.6e-175 619.8 707 52.8
Thecc.08G072000 Theobroma cacao HOM05D003682 ORTHO05D004224 2.2e-174 616.7 708 57.9
vmacro04646 Vaccinium macrocarpon HOM05D003682 ORTHO05D004224 2.9e-174 616.3 710 55.4
QL09p017991 Quercus lobata HOM05D003682 ORTHO05D004224 1.8e-171 607.1 706 58.2
TAR381G0824 Trochodendron aralioides HOM05D003682 ORTHO05D004224 2.3e-171 606.7 709 59.9
Lsat_1_v5_gn_6_106460 Lactuca sativa HOM05D003682 ORTHO05D004224 9.7e-170 601.3 707 58.8
Peaxi162Scf00454g00225 Petunia axillaris HOM05D003682 ORTHO05D004224 1.1e-168 597.8 704 51.7
TAR625G0645 Trochodendron aralioides HOM05D003682 ORTHO05D004224 3.1e-168 596.3 708 58.8
Ciclev10000458m.g Citrus clementina HOM05D003682 ORTHO05D004224 4.1e-168 595.9 705 55.2
Potri.006G225100 Populus trichocarpa HOM05D003682 ORTHO05D004224 2.5e-165 586.6 709 53.9
CiPaw.08G056300 Carya illinoinensis HOM05D003682 ORTHO05D004224 3.2e-165 586.3 703 57.5
Gohir.D04G010200 Gossypium hirsutum HOM05D003682 ORTHO05D004224 4.6e-164 582.4 711 57.5
Gohir.A06G031900 Gossypium hirsutum HOM05D003682 ORTHO05D004224 6.1e-164 582.0 711 57.5
HanXRQChr10g0277791 Helianthus annuus HOM05D003682 ORTHO05D004224 1.4e-163 580.9 703 58.0
Ca_16009_v3 Cicer arietinum L. HOM05D003682 ORTHO05D004224 1.8e-163 580.5 707 53.6
Gorai.012G012000 Gossypium raimondii HOM05D003682 ORTHO05D004224 1.5e-162 577.4 711 57.4
CANSAT80G0637 Cannabis sativa HOM05D003682 ORTHO05D004224 2.5e-162 576.6 707 55.3
Gorai.010G034200 Gossypium raimondii HOM05D003682 ORTHO05D004224 2.5e-162 576.6 711 57.0
SalBow4G2331 Salvia bowleyana HOM05D003682 ORTHO05D004224 3.3e-162 576.2 515 67.4
Sabra06G0174000 Salix brachista HOM05D003682 ORTHO05D004224 5.7e-162 575.5 711 54.4
Gohir.D06G031000 Gossypium hirsutum HOM05D003682 ORTHO05D004224 2.2e-161 573.5 712 56.9
Gohir.A05G405400 Gossypium hirsutum HOM05D003682 ORTHO05D004224 3.7e-161 572.8 707 56.6
FAN18G1070 Fragaria x ananassa HOM05D003682 ORTHO05D004224 4.8e-161 572.4 706 54.4
Haze_22471 Corylus avellana HOM05D003682 ORTHO05D004224 1.4e-160 570.9 708 55.9
Duzib093G1710 Durio zibethinus HOM05D003682 ORTHO05D004224 5.3e-160 568.9 706 57.2
FvH4_5g35190 Fragaria vesca HOM05D003682 ORTHO05D004224 9.1e-160 568.2 706 54.7
ECA246G3230 Erigeron canadensis HOM05D003682 ORTHO05D004224 1.5e-159 567.4 706 56.1
Manes.05G189900 Manihot esculenta HOM05D003682 ORTHO05D004224 3.4e-159 566.2 709 54.9
Rhsim07G0212400 Rhododendron simsii HOM05D003682 ORTHO05D004224 1.0e-158 564.7 770 43.1
Dinv44868 Davidia involucrata HOM05D003682 ORTHO05D004224 3.8e-158 562.8 631 63.1
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 1.2e-156 557.8 707 48.9
RcHm_v2.0_Chr7g0236311 Rosa chinensis HOM05D003682 ORTHO05D004224 3.0e-155 553.1 708 55.2
arahy.Tifrunner.gnm1.ann1.X4VYGK Arachis hypogaea HOM05D003682 ORTHO05D004224 3.9e-155 552.7 710 55.5
Lalb_Chr17g0344591 Lupinus albus HOM05D003682 ORTHO05D004224 1.5e-154 550.8 705 55.6
Lj1g0007093 Lotus japonicus HOM05D003682 ORTHO05D004224 2.6e-154 550.1 704 53.3
arahy.Tifrunner.gnm1.ann1.6QC2QS Arachis hypogaea HOM05D003682 ORTHO05D004224 3.3e-154 549.7 710 55.8
TWI38G0994 Tripterygium wilfordii HOM05D003682 ORTHO05D004224 1.7e-153 547.4 718 51.1
Glyma.06G097500 Glycine max HOM05D003682 ORTHO05D004224 6.3e-153 545.4 705 55.3
FAN08G1971 Fragaria x ananassa HOM05D003682 ORTHO05D004224 7.0e-152 542.0 757 46.4
Glyma.04G095800 Glycine max HOM05D003682 ORTHO05D004224 1.2e-151 541.2 705 54.8
PGR042G1797 Punica granatum HOM05D003682 ORTHO05D004224 2.9e-150 536.6 707 53.6
Eucgr.F00427 Eucalyptus grandis HOM05D003682 ORTHO05D004224 5.0e-150 535.8 709 54.3
MBI16_g12477_MAGBIO Magnolia biondii HOM05D003682 ORTHO05D004224 5.0e-150 535.8 673 55.6
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 6.5e-150 535.4 709 47.0
ClCG11G014620 Citrullus lanatus HOM05D003682 ORTHO05D004224 1.8e-147 527.3 719 50.8
FAN13G2001 Fragaria x ananassa HOM05D003682 ORTHO05D004224 2.3e-147 526.9 729 49.9
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 1.5e-146 524.2 709 47.1
Phvul.009G036000 Phaseolus vulgaris HOM05D003682 ORTHO05D004224 3.3e-146 523.1 705 53.2
CsaV3_6G052200 Cucumis sativus L. HOM05D003682 ORTHO05D004224 9.7e-146 521.5 705 51.8
MELO3C007092.2 Cucumis melo HOM05D003682 ORTHO05D004224 2.2e-145 520.4 742 50.8
Prupe.1G533400 Prunus persica HOM05D003682 ORTHO05D004224 1.1e-144 518.1 709 53.5
Psat7g218480 Pisum sativum HOM05D003682 ORTHO05D004224 1.4e-144 517.7 706 53.7
Medtr3g100110 Medicago truncatula HOM05D003682 ORTHO05D004224 2.4e-144 516.9 726 49.3
EL10Ac6g13977 Beta vulgaris HOM05D003682 ORTHO05D004224 5.3e-144 515.8 742 47.8
Sed0002040 Sechium edule HOM05D003682 ORTHO05D004224 2.2e-142 510.4 710 51.4
MD08G1200000 Malus domestica HOM05D003682 ORTHO05D004224 1.0e-139 501.5 705 47.9
VMungo1309G2518 Vigna mungo HOM05D003682 ORTHO05D004224 8.8e-139 498.4 735 50.1
Aa31LG4G9590 Aethionema arabicum HOM05D003682 ORTHO05D004224 5.7e-138 495.7 709 53.0
Nn5g27243 Nelumbo nucifera HOM05D003682 ORTHO05D004224 5.7e-138 495.7 657 56.8
Sed0007462 Sechium edule HOM05D003682 ORTHO05D004224 5.7e-138 495.7 713 51.9
Carub.0007s1658 Capsella rubella HOM05D003682 ORTHO05D004224 7.5e-138 495.4 706 51.0
AUR62042881 Chenopodium quinoa HOM05D003682 ORTHO05D004224 1.7e-137 494.2 705 48.2
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 1.4e-136 491.1 706 54.1
Thhalv10024594m.g Eutrema salsugineum HOM05D003682 ORTHO05D004224 4.1e-136 489.6 708 51.7
TPR.G6373 Trifolium pratense HOM05D003682 ORTHO05D004224 5.3e-136 489.2 709 48.9
A03p55320 Brassica napus HOM05D003682 ORTHO05D004224 4.5e-135 486.1 708 52.0
BcaC06g32881 Brassica carinata HOM05D003682 ORTHO05D004224 3.8e-134 483.0 707 51.8
BraA03t14591Z Brassica rapa HOM05D003682 ORTHO05D004224 3.8e-134 483.0 708 51.6
BraA01t01520Z Brassica rapa HOM05D003682 ORTHO05D004224 6.5e-134 482.3 707 52.3
BolC7t45853H Brassica oleracea HOM05D003682 ORTHO05D004224 1.5e-133 481.1 707 50.9
AL7G28730 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 6.1e-132 475.7 715 49.8
A01p15860 Brassica napus HOM05D003682 ORTHO05D004224 8.0e-132 475.3 707 53.0
C07p53610 Brassica napus HOM05D003682 ORTHO05D004224 1.8e-131 474.2 707 51.2
Sp7g22480 Schrenkiella parvula HOM05D003682 ORTHO05D004224 2.3e-131 473.8 706 50.3
C01p19800 Brassica napus HOM05D003682 ORTHO05D004224 8.8e-131 471.9 707 50.5
BolC1t01908H Brassica oleracea HOM05D003682 ORTHO05D004224 3.4e-130 469.9 705 50.4
Sc26g0002240 Simmondsia chinensis HOM05D003682 ORTHO05D004224 4.4e-130 469.5 635 53.7
CARHR231880 Cardamine hirsuta HOM05D003682 ORTHO05D004224 5.7e-130 469.2 710 53.0
Hund17277 Selenicereus undatus HOM05D003682 ORTHO05D004224 4.1e-128 463.0 701 51.8
ATR0767G054 Amborella trichopoda HOM05D003682 ORTHO05D004224 5.4e-128 462.6 713 48.9
AT4G24490 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 5.4e-128 462.6 710 51.1
Zm00001eb224710 Zea mays HOM05D003682 ORTHO05D004224 2.2e-121 440.7 712 41.0
FAN04G1105 Fragaria x ananassa HOM05D003682 ORTHO05D004224 9.2e-120 435.3 708 39.4
CSS0003141 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.5e-119 433.0 521 50.9
HPP92_013453 Vanilla planifolia HOM05D003682 ORTHO05D004224 2.8e-116 423.7 702 40.7
Os06g0677500 Oryza sativa ssp. japonica HOM05D003682 ORTHO05D004224 2.0e-114 417.5 706 40.5
CSS0030960 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.9e-113 412.9 518 54.8
AL3G20810 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 6.4e-113 412.5 714 42.3
SEGI_28473 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 3.9e-110 403.3 718 44.7
BcaC09g50863 Brassica carinata HOM05D003682 ORTHO05D004224 8.0e-108 395.6 579 50.9
Zm00001eb273870 Zea mays HOM05D003682 ORTHO05D004224 8.0e-108 395.6 708 38.0
Carub.0003s1254 Capsella rubella HOM05D003682 ORTHO05D004224 4.4e-106 389.8 719 45.9
Atru.chr13.999 Acer truncatum HOM05D003682 ORTHO05D004224 7.5e-106 389.0 471 60.1
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 9.8e-106 388.7 701 38.8
AUR62037113 Chenopodium quinoa HOM05D003682 ORTHO05D004224 2.2e-105 387.5 533 40.7
AT5G41820 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 3.0e-102 377.1 733 40.7
AL7G47420 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 2.9e-97 360.5 730 37.0
CDE01G0832 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 3.9e-94 350.1 651 47.8
MD15G1387100 Malus domestica HOM05D003682 ORTHO05D004224 7.3e-93 345.9 556 49.3
HanXRQChr08g0233491 Helianthus annuus HOM05D003682 ORTHO05D004224 2.1e-84 317.8 422 56.4
GSVIVG01009191001 Vitis vinifera HOM05D003682 ORTHO05D004224 2.4e-80 304.3 311 59.2
SHI09562 Sapria himalayana HOM05D003682 ORTHO05D000023 7.8e-79 299.3 527 41.7
Mapoly0151s0003 Marchantia polymorpha HOM05D003682 ORTHO05D004224 6.2e-76 289.7 725 41.8
SEGI_15297 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 1.9e-72 278.1 531 36.3
Prupe.1G572600 Prunus persica HOM05D003682 ORTHO05D004224 2.3e-70 271.2 466 41.6
CSS0029858 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.6e-66 257.7 491 35.2
Glyma.02G123302 Glycine max HOM05D003682 ORTHO05D004224 7.9e-63 246.1 349 41.5
unitig_0.g155 Utricularia gibba HOM05D003682 ORTHO05D004224 1.1e-61 242.3 280 55.7
ECA232G1558 Erigeron canadensis HOM05D003682 ORTHO05D004224 2.5e-61 241.1 253 62.1
CSS0013415 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 5.7e-61 240.0 479 34.9
SEGI_17476 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 1.5e-58 231.9 432 35.6
GSVIVG01009190001 Vitis vinifera HOM05D003682 ORTHO05D004224 1.4e-56 225.3 254 70.9
Lalb_Chr04g0252801 Lupinus albus HOM05D003682 ORTHO05D004224 7.1e-56 223.0 256 63.3
SalBow4G1793 Salvia bowleyana HOM05D003682 ORTHO05D004224 9.1e-43 179.5 189 59.8
CBR_g19613 Chara braunii HOM05D003682 ORTHO05D004224 2.9e-41 174.5 699 30.0
COL.COLO4_35257 Corchorus olitorius HOM05D003682 ORTHO05D004224 3.6e-39 167.5 128 64.1
Cpa.g.c39765 Carica papaya HOM05D003682 ORTHO05D004224 7.9e-39 166.4 200 48.0
AagrBONN_evm.TU.Sc2ySwM_117.1254 Anthoceros agrestis HOM05D003682 ORTHO05D004224 2.2e-36 158.3 240 37.5
BcaNung04806 Brassica carinata HOM05D003682 ORTHO05D004224 4.1e-35 154.1 128 58.6
unitig_0.g156 Utricularia gibba HOM05D003682 ORTHO05D004224 3.2e-32 144.4 109 64.2
Pp3c1_10430 Physcomitrium patens HOM05D003682 ORTHO05D004224 1.2e-31 142.5 524 29.8
SEGI_24080 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 6.7e-30 136.7 126 54.8
Actinidia36899 Actinidia chinensis HOM05D003682 ORTHO05D004224 7.5e-29 133.3 159 57.9
HanXRQChr08g0233481 Helianthus annuus HOM05D003682 ORTHO05D004224 7.5e-29 133.3 139 66.9
HPP92_013470 Vanilla planifolia HOM05D003682 ORTHO05D004224 1.3e-28 132.5 210 50.5
SHI09561 Sapria himalayana HOM05D000105 ORTHO05D000023 3.7e-28 131.0 128 53.9
Cpa.g.c34457.1 Carica papaya HOM05D003682 ORTHO05D004224 7.0e-27 126.7 134 53.7
Dinv42603 Davidia involucrata HOM05D003682 ORTHO05D004224 9.1e-27 126.3 135 54.1
CSS0023594 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.2e-24 117.9 98 60.2
BcaB06g27567 Brassica carinata HOM05D003682 ORTHO05D004224 9.4e-24 116.3 116 52.6
SMO307G0051 Selaginella moellendorffii HOM05D003682 ORTHO05D004224 2.3e-22 111.7 128 46.1
CSS0005132 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 5.7e-21 107.1 97 57.7
Psat5g049320 Pisum sativum HOM05D003682 ORTHO05D004224 4.1e-19 100.9 164 42.1
EL10Ac3g05976 Beta vulgaris HOM05D003682 ORTHO05D004224 2.2e-17 95.1 72 59.7
CSS0014234 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.2e-17 95.1 94 50.0
Aqoxy2G00859 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 2.5e-16 91.7 95 46.3
CSS0003380 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 5.5e-16 90.5 94 48.9
PGR102G2117 Punica granatum HOM05D003682 ORTHO05D004224 1.2e-15 89.4 262 29.4
CSS0026243 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.7e-15 88.2 94 47.9
CSS0040590 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.7e-15 88.2 94 47.9
BcaNung05639 Brassica carinata HOM05D006679 ORTHO05D008461 8.0e-15 86.7 135 34.8
CSS0042448 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.0e-13 82.0 94 45.7
Lsat_1_v5_gn_3_58200 Lactuca sativa HOM05D003682 ORTHO05D004224 1.3e-12 79.3 76 56.6
MCO12G062 Micromonas commoda HOM05D003682 ORTHO05D004224 4.9e-12 77.4 283 26.9
CSS0029499 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.4e-11 75.9 58 60.3
CSS0006921 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.8e-11 75.5 94 43.6
CSS0029231 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.4e-11 75.1 94 44.7
CSS0000677 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.1e-11 74.7 94 44.7
CSS0045772 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.1e-11 74.7 59 57.6
CSS0029631 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.7e-10 71.6 58 56.9
CSS0037736 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.5e-10 71.2 58 58.6
Lalb_Chr04g0252781 Lupinus albus HOM05D003682 ORTHO05D004224 3.5e-10 71.2 75 48.0
CSS0020196 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.5e-10 70.9 58 56.9
CSS0037747 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.5e-10 70.9 58 56.9
Cre07.g339350 Chlamydomonas reinhardtii HOM05D003682 ORTHO05D004224 1.9e-08 65.5 126 34.1
CAN.G475.12 Capsicum annuum HOM05D003682 ORTHO05D004224 3.3e-08 64.7 53 52.8
arahy.Tifrunner.gnm1.ann1.R6K80C Arachis hypogaea HOM05D003682 ORTHO05D004224 1.2e-07 62.8 145 38.6
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 2.8e-07 61.6 32 81.2
PRCOL_00003254 Prasinoderma coloniale HOM05D003682 ORTHO05D004224 2.8e-07 61.6 249 22.9
Prupe.1G572700 Prunus persica HOM05D003682 ORTHO05D004224 2.8e-07 61.6 62 45.2
TAR628G0387 Trochodendron aralioides HOM05D003682 ORTHO05D004224 2.8e-07 61.6 38 68.4
arahy.Tifrunner.gnm1.ann1.H7L4UV Arachis hypogaea HOM05D003682 ORTHO05D004224 1.0e-06 59.7 88 46.6


User provided reference genes

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