Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 0.0e+00 1201.0 623 100.0
Oeu036873.1 Olea europaea HOM05D003724 ORTHO05D004367 1.4e-284 982.6 627 83.3
Lj3C1068T3 Lonicera japonica HOM05D003724 ORTHO05D004367 2.1e-240 835.9 627 72.1
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 6.0e-240 834.3 614 73.1
Migut.C00176 Erythranthe guttata HOM05D003724 ORTHO05D004367 5.1e-239 831.2 630 72.4
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 1.9e-238 829.3 629 71.4
Migut.K00732 Erythranthe guttata HOM05D003724 ORTHO05D004367 1.4e-236 823.2 630 70.5
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 1.8e-236 822.8 631 72.6
SalBow2G1610 Salvia bowleyana HOM05D003724 ORTHO05D004367 7.6e-235 817.4 626 71.6
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 9.9e-235 817.0 629 69.8
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 1.6e-232 809.7 629 69.3
TWI75G0323 Tripterygium wilfordii HOM05D003724 ORTHO05D004367 7.9e-232 807.4 629 70.3
Solyc04g007330.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 7.3e-230 800.8 628 69.7
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 5.3e-228 794.7 635 67.7
Sopen04g002390 Solanum pennellii HOM05D003724 ORTHO05D004367 5.8e-227 791.2 628 68.8
CiPaw.05G110100 Carya illinoinensis HOM05D003724 ORTHO05D004367 6.4e-226 787.7 629 69.0
CANSAT01G0850 Cannabis sativa HOM05D003724 ORTHO05D004367 2.4e-225 785.8 632 69.1
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 4.2e-225 785.0 629 69.2
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 9.3e-225 783.9 639 67.4
SGA_v2.0_scaffold9G04687 Striga asiatica HOM05D003724 ORTHO05D004367 1.2e-224 783.5 690 63.6
Potri.003G173200 Populus trichocarpa HOM05D003724 ORTHO05D004367 4.6e-224 781.6 629 68.7
FvH4_4g23800 Fragaria vesca HOM05D003724 ORTHO05D004367 6.0e-224 781.2 639 66.5
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 1.0e-223 780.4 629 66.8
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 1.0e-223 780.4 639 66.0
FAN22G0779 Fragaria x ananassa HOM05D003724 ORTHO05D004367 3.7e-221 771.9 639 66.0
PGR102G1478 Punica granatum HOM05D003724 ORTHO05D004367 6.2e-221 771.2 628 68.0
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 9.0e-220 767.3 640 66.4
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 2.0e-219 766.1 638 67.7
Rhsim12G0026000 Rhododendron simsii HOM05D003724 ORTHO05D004367 3.4e-219 765.4 614 69.4
Cpa.g.sc43.54 Carica papaya HOM05D003724 ORTHO05D004367 4.5e-219 765.0 641 66.3
THA.LOC104825509 Tarenaya hassleriana HOM05D003724 ORTHO05D004367 1.0e-218 763.8 623 66.1
MELO3C010743.2 Cucumis melo HOM05D003724 ORTHO05D004367 6.5e-218 761.1 625 67.7
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 8.4e-218 760.8 640 66.9
Actinidia30650 Actinidia chinensis HOM05D003724 ORTHO05D004367 2.3e-215 752.7 631 67.8
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 6.7e-215 751.1 628 65.9
FAN17G0970 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.9e-214 749.6 666 63.1
Sed0021729 Sechium edule HOM05D003724 ORTHO05D004367 1.9e-214 749.6 627 66.3
Aqoxy7G01914 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 2.8e-213 745.7 628 64.8
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 2.8e-213 745.7 652 63.5
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 3.7e-213 745.3 615 66.5
Aqoxy5G02771 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 9.0e-212 740.7 628 64.2
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea HOM05D003724 ORTHO05D004367 1.3e-210 736.9 629 63.8
Potri.001G055201 Populus trichocarpa HOM05D003724 ORTHO05D004367 1.3e-210 736.9 648 64.7
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 2.2e-210 736.1 625 64.0
HanXRQChr08g0207781 Helianthus annuus HOM05D003724 ORTHO05D004367 2.2e-210 736.1 627 65.4
CsaV3_2G025450 Cucumis sativus L. HOM05D003724 ORTHO05D004367 8.4e-210 734.2 617 66.3
Sabra03G0126700 Salix brachista HOM05D003724 ORTHO05D004367 3.2e-209 732.3 629 65.3
Peaxi162Scf00128g01233 Petunia axillaris HOM05D003724 ORTHO05D004367 5.5e-209 731.5 638 64.6
Hund06087 Selenicereus undatus HOM05D003724 ORTHO05D004367 1.8e-207 726.5 669 62.0
Lalb_Chr01g0009271 Lupinus albus HOM05D003724 ORTHO05D004367 6.9e-204 714.5 636 62.9
Thhalv10018311m.g Eutrema salsugineum HOM05D003724 ORTHO05D004367 2.6e-203 712.6 627 64.6
Aa31sc377G30 Aethionema arabicum HOM05D003724 ORTHO05D004367 3.4e-203 712.2 643 62.5
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 5.9e-203 711.4 631 65.0
TPR.G28283 Trifolium pratense HOM05D003724 ORTHO05D004367 1.3e-202 710.3 628 63.1
Medtr3g085380 Medicago truncatula HOM05D003724 ORTHO05D004367 1.7e-202 709.9 630 62.9
Psat5g096280 Pisum sativum HOM05D003724 ORTHO05D004367 1.2e-200 703.7 631 63.4
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 1.8e-199 699.9 637 61.1
AL2G25920 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 3.9e-199 698.7 628 63.1
Lj1g0003468 Lotus japonicus HOM05D003724 ORTHO05D004367 2.0e-198 696.4 628 62.3
Sp5g22320 Schrenkiella parvula HOM05D003724 ORTHO05D004367 2.5e-198 696.0 626 63.9
Lalb_Chr03g0034531 Lupinus albus HOM05D003724 ORTHO05D004367 1.7e-197 693.3 629 61.4
PGSC0003DMG400029108 Solanum tuberosum HOM05D003724 ORTHO05D004367 2.8e-197 692.6 574 66.4
AT1G67370 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 6.3e-197 691.4 627 63.2
Sabra01G0039800 Salix brachista HOM05D003724 ORTHO05D004367 2.6e-195 686.0 649 60.7
ClCG08G017130 Citrullus lanatus HOM05D003724 ORTHO05D004367 8.5e-194 681.0 615 62.9
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 8.5e-194 681.0 653 58.8
Cc09_g04930 Coffea canephora HOM05D003724 ORTHO05D004367 9.4e-193 677.6 565 64.4
Lsat_1_v5_gn_8_147680 Lactuca sativa HOM05D003724 ORTHO05D004367 9.4e-193 677.6 627 61.1
CARHR059910 Cardamine hirsuta HOM05D003724 ORTHO05D004367 2.1e-192 676.4 629 60.6
A07p33960 Brassica napus HOM05D003724 ORTHO05D004367 3.6e-192 675.6 632 60.3
AUR62021613 Chenopodium quinoa HOM05D003724 ORTHO05D004367 4.7e-192 675.2 632 60.9
PSO478G4090 Papaver somniferum HOM05D003724 ORTHO05D004367 3.9e-191 672.2 636 60.8
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 6.7e-191 671.4 628 61.0
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 6.7e-191 671.4 568 66.0
BraA07t31023Z Brassica rapa HOM05D003724 ORTHO05D004367 1.5e-190 670.2 632 60.0
PSO782G1352 Papaver somniferum HOM05D003724 ORTHO05D004367 5.7e-190 668.3 636 60.7
PSO339G4917 Papaver somniferum HOM05D003724 ORTHO05D004367 7.4e-190 667.9 636 61.0
C06p42900 Brassica napus HOM05D003724 ORTHO05D004367 9.7e-190 667.5 632 59.8
BolC6t39148H Brassica oleracea HOM05D003724 ORTHO05D004367 1.3e-189 667.2 632 59.8
BcaC08g46167 Brassica carinata HOM05D003724 ORTHO05D004367 2.8e-189 666.0 630 60.0
Nitab4.5_0003884g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 2.8e-189 666.0 606 60.9
GSVIVG01010479001 Vitis vinifera HOM05D003724 ORTHO05D004367 2.4e-188 662.9 540 67.2
ATR0561G244 Amborella trichopoda HOM05D003724 ORTHO05D004367 1.0e-186 657.5 643 61.3
PSO478G5007 Papaver somniferum HOM05D003724 ORTHO05D004367 1.0e-186 657.5 636 59.7
PSO782G3500 Papaver somniferum HOM05D003724 ORTHO05D004367 3.8e-186 655.6 633 59.2
AUR62008480 Chenopodium quinoa HOM05D003724 ORTHO05D004367 1.1e-185 654.1 649 58.9
PSO384G3745 Papaver somniferum HOM05D003724 ORTHO05D004367 4.2e-185 652.1 637 59.7
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea HOM05D003724 ORTHO05D004367 2.1e-184 649.8 629 57.9
Nitab4.5_0002699g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 8.0e-184 647.9 599 60.6
HPP92_003196 Vanilla planifolia HOM05D003724 ORTHO05D004367 2.0e-182 643.3 633 59.2
Nn3g16465 Nelumbo nucifera HOM05D003724 ORTHO05D004367 3.3e-182 642.5 633 58.9
Glyma.18G006800 Glycine max HOM05D003724 ORTHO05D004367 5.7e-182 641.7 511 66.5
Sc04g0010100 Simmondsia chinensis HOM05D003724 ORTHO05D004367 2.0e-179 633.3 587 61.3
EL10Ac6g13492 Beta vulgaris HOM05D003724 ORTHO05D004367 5.5e-177 625.2 639 57.6
CDE05G2922 Ceratophyllum demersum HOM05D003724 ORTHO05D004367 1.5e-174 617.1 629 57.1
Lj1g0008936 Lotus japonicus HOM05D003724 ORTHO05D004367 9.8e-174 614.4 637 56.5
Carub.0002s1366 Capsella rubella HOM05D003724 ORTHO05D004367 2.7e-168 596.3 573 59.2
RcHm_v2.0_Chr4g0430321 Rosa chinensis HOM05D003724 ORTHO05D004367 6.1e-168 595.1 539 61.2
Ah.01g020690 Amaranthus hybridus HOM05D003724 ORTHO05D004367 2.8e-165 586.3 637 55.9
Os09g0506800 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 7.0e-164 581.6 627 54.5
Sed0012468 Sechium edule HOM05D003724 ORTHO05D004367 2.3e-162 576.6 572 58.6
Zm00001eb102420 Zea mays HOM05D003724 ORTHO05D004367 1.2e-160 570.9 636 53.3
Ciclev10033677m.g Citrus clementina HOM05D003724 ORTHO05D004367 1.4e-159 567.4 608 57.7
vmacro01062 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 3.6e-152 542.7 410 70.0
MBI06_g20299_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.4e-148 530.8 653 52.2
CAN.G804.4 Capsicum annuum HOM05D003724 ORTHO05D004367 4.4e-142 509.2 336 77.4
Manes.12G011600 Manihot esculenta HOM05D003724 ORTHO05D004367 9.8e-142 508.1 337 77.4
Glyma.11G250400 Glycine max HOM05D003724 ORTHO05D004367 1.7e-141 507.3 528 56.8
unitig_8.g3138 Utricularia gibba HOM05D003724 ORTHO05D004367 2.8e-136 490.0 528 53.4
CSS0039632 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 8.9e-135 485.0 317 77.3
FAN24G3534 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.1e-132 478.0 518 54.2
MBI06_g46773_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 6.6e-130 468.8 447 58.8
C06p38720 Brassica napus HOM05D003724 ORTHO05D004367 3.1e-127 459.9 623 48.0
PSO339G0549 Papaver somniferum HOM05D003724 ORTHO05D004367 6.9e-127 458.8 627 47.0
BcaB03g15202 Brassica carinata HOM05D003724 ORTHO05D004367 1.2e-126 458.0 337 71.5
COL.COLO4_20398 Corchorus olitorius HOM05D003724 ORTHO05D004367 1.9e-124 450.7 412 63.1
AagrBONN_evm.TU.Sc2ySwM_368.2626 Anthoceros agrestis HOM05D003724 ORTHO05D004367 5.7e-97 359.4 678 37.2
PSO170G4962 Papaver somniferum HOM05D003724 ORTHO05D004367 1.3e-96 358.2 386 53.6
CARHR058050 Cardamine hirsuta HOM05D003724 ORTHO05D004367 1.1e-84 318.5 277 64.3
AL1G56910 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 4.6e-83 313.2 385 53.8
Mapoly0003s0194 Marchantia polymorpha HOM05D003724 ORTHO05D004367 2.3e-82 310.8 541 39.9
FAN12G2603 Fragaria x ananassa HOM05D003724 ORTHO05D004367 3.9e-82 310.1 321 56.7
PSO339G0625 Papaver somniferum HOM05D003724 ORTHO05D004367 4.4e-81 306.6 361 49.9
DCAR_026466 Daucus carota HOM05D003724 ORTHO05D004367 9.7e-81 305.4 195 82.1
MBI06_g32743_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 5.3e-79 299.7 323 55.4
CAN.G804.3 Capsicum annuum HOM05D003724 ORTHO05D004367 2.2e-77 294.3 275 60.4
SHI17968 Sapria himalayana HOM05D003724 ORTHO05D004367 1.6e-75 288.1 230 65.2
CBR_g17956 Chara braunii HOM05D003724 ORTHO05D004367 1.5e-73 281.6 674 33.5
FvH4_4g23791 Fragaria vesca HOM05D003724 ORTHO05D004367 1.2e-65 255.4 275 56.7
SMO116G0148 Selaginella moellendorffii HOM05D003724 ORTHO05D004367 1.8e-63 248.1 226 57.5
Solyc05g015370.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 2.0e-62 244.6 251 54.2
SHI17969 Sapria himalayana HOM05D003724 ORTHO05D004367 1.3e-61 241.9 282 52.5
FvH4_2g22740 Fragaria vesca HOM05D003724 ORTHO05D004367 2.9e-61 240.7 271 52.0
FAN12G4010 Fragaria x ananassa HOM05D003724 ORTHO05D004367 3.2e-60 237.3 252 57.5
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 9.4e-60 235.7 337 49.3
BcaB03g15203 Brassica carinata HOM05D003724 ORTHO05D004367 2.4e-55 221.1 278 50.4
Pp3c5_4780 Physcomitrium patens HOM05D003724 ORTHO05D004367 1.2e-54 218.8 739 29.1
PSO782G0388 Papaver somniferum HOM05D003724 ORTHO05D004367 7.5e-49 199.5 271 46.5
Os12g0606600 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 1.3e-48 198.7 267 45.3
Phvul.001G261701 Phaseolus vulgaris HOM05D003724 ORTHO05D004367 3.1e-47 194.1 275 47.3
Sopen05g010640 Solanum pennellii HOM05D003724 ORTHO05D004367 5.0e-45 186.8 106 87.7
COL.COLO4_20397 Corchorus olitorius HOM05D003724 ORTHO05D004367 2.9e-40 171.0 145 69.0
PSO832G0175 Papaver somniferum HOM05D003724 ORTHO05D004367 3.7e-40 170.6 120 72.5
FAN07G2055 Fragaria x ananassa HOM05D003724 ORTHO05D004367 2.3e-37 161.4 217 50.7
FAN12G4031 Fragaria x ananassa HOM05D003724 ORTHO05D004367 3.0e-37 161.0 166 56.6
Cre10.g452550 Chlamydomonas reinhardtii HOM05D003724 ORTHO05D004367 1.5e-36 158.7 257 40.1
Solyc05g015360.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 5.6e-36 156.8 109 72.5
CSS0010492 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 2.3e-34 151.4 152 59.9
Nitab4.5_0000767g0030 Nicotiana tabacum HOM05D003724 ORTHO05D004367 2.0e-33 148.3 206 44.7
Nitab4.5_0002119g0030 Nicotiana tabacum HOM05D003724 ORTHO05D004367 4.4e-33 147.1 237 40.5
GSVIVG01010478001 Vitis vinifera HOM05D003724 ORTHO05D004367 6.4e-32 143.3 75 94.7
RcHm_v2.0_Chr4g0430331 Rosa chinensis HOM05D003724 ORTHO05D004367 4.1e-31 140.6 74 94.6
Glyma.11G250351 Glycine max HOM05D003724 ORTHO05D004367 5.4e-31 140.2 77 90.9
Hma1.2p1_0200F.1_g085970 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 3.5e-30 137.5 316 32.9
Hma1.2p1_0053F.1_g030850 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 8.6e-29 132.9 395 30.4
Solyc05g015380.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 5.6e-28 130.2 161 51.6
Lsat_1_v5_gn_3_110541 Lactuca sativa HOM05D003724 ORTHO05D004367 4.7e-27 127.1 112 60.7
Sopen05g010670 Solanum pennellii HOM05D003724 ORTHO05D004367 8.1e-27 126.3 123 58.5
vmacro01061 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 1.1e-26 125.9 146 55.5
SHI17966 Sapria himalayana HOM05D003724 ORTHO05D004367 6.8e-26 123.2 126 55.6
PSO170G3909 Papaver somniferum HOM05D003724 ORTHO05D004367 4.4e-25 120.6 157 47.1
vmacro18929 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 1.6e-22 112.1 150 42.7
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 7.8e-22 109.8 302 32.8
PRCOL_00002813 Prasinoderma coloniale HOM05D003724 ORTHO05D004367 1.4e-18 99.0 251 29.9
PSO063G4593 Papaver somniferum HOM05D003724 ORTHO05D004367 1.8e-18 98.6 77 66.2
Os01g0165800 Oryza sativa ssp. japonica HOM05D020709 ORTHO05D004367 4.0e-18 97.4 104 47.1
TPR.G40282 Trifolium pratense HOM05D003724 ORTHO05D004367 4.1e-15 87.4 121 44.6
Lj3g0010411 Lotus japonicus HOM05D003724 ORTHO05D004367 3.6e-11 74.3 107 45.8
CSS0008698 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 1.5e-09 68.9 88 52.3
Zm00001eb247260 Zea mays HOM05D000069 ORTHO05D004367 7.6e-09 66.6 125 46.4
SHI18623 Sapria himalayana HOM05D003724 ORTHO05D004367 2.9e-08 64.7 50 58.0
DCAR_028604 Daucus carota HOM05D000366 ORTHO05D000437 1.9e-07 62.0 50 64.0
MBI07_g38547_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.9e-07 62.0 73 41.1
PSO561G0043 Papaver somniferum HOM05D003724 ORTHO05D004367 2.4e-07 61.6 100 47.0
MBI01_g03586_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 4.2e-07 60.8 71 42.3
MBI13_g41189_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 4.2e-07 60.8 71 42.3
MBI16_g19191_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 5.4e-07 60.5 71 42.3
MBI13_g14579_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 2.1e-06 58.5 60 48.3
QL06p013707 Quercus lobata HOM05D003724 ORTHO05D000062 2.1e-06 58.5 32 90.6
QL10p034497 Quercus lobata HOM05D003724 ORTHO05D004367 6.0e-06 57.0 32 87.5


User provided reference genes

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