Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060752.1 Olea europaea HOM05D005088 ORTHO05D006914 1.9e-53 213.0 179 100.0
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 6.1e-36 154.8 126 66.7
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 4.4e-26 122.1 135 51.1
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 7.4e-26 121.3 134 53.0
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 2.2e-25 119.8 135 49.6
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 3.7e-25 119.0 133 51.1
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 1.4e-24 117.1 136 50.7
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 1.8e-24 116.7 139 48.9
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 4.1e-24 115.5 123 53.7
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 4.1e-24 115.5 133 50.4
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 4.1e-24 115.5 137 49.6
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 7.0e-24 114.8 130 51.5
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 7.0e-24 114.8 134 50.7
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.2e-23 114.0 130 51.5
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 1.2e-23 114.0 137 49.6
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 1.6e-23 113.6 131 48.9
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 2.0e-23 113.2 136 48.5
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 2.0e-23 113.2 135 48.9
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 2.0e-23 113.2 121 52.1
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 2.6e-23 112.8 129 51.9
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 3.5e-23 112.5 137 48.2
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 4.5e-23 112.1 135 48.9
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 5.9e-23 111.7 130 50.0
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 5.9e-23 111.7 135 48.1
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 5.9e-23 111.7 126 51.6
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 7.7e-23 111.3 121 51.2
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 1.0e-22 110.9 140 47.9
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 1.0e-22 110.9 146 46.6
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 1.0e-22 110.9 134 48.5
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 2.9e-22 109.4 139 46.0
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 3.8e-22 109.0 148 45.3
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 3.8e-22 109.0 132 47.7
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 3.8e-22 109.0 137 47.4
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 5.0e-22 108.6 142 46.5
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 5.0e-22 108.6 130 49.2
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 8.5e-22 107.8 126 49.2
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 1.1e-21 107.5 130 50.0
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 1.1e-21 107.5 126 49.2
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 1.1e-21 107.5 126 46.8
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 1.1e-21 107.5 136 47.8
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 1.1e-21 107.5 136 47.8
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 1.9e-21 106.7 135 46.7
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 1.9e-21 106.7 133 46.6
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 2.5e-21 106.3 139 46.8
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 2.5e-21 106.3 142 46.5
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 2.5e-21 106.3 125 47.2
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 4.2e-21 105.5 148 44.6
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 4.2e-21 105.5 141 46.1
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 4.2e-21 105.5 133 45.1
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 5.5e-21 105.1 137 46.0
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 5.5e-21 105.1 134 45.5
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 5.5e-21 105.1 135 45.9
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 5.5e-21 105.1 130 47.7
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 5.5e-21 105.1 130 47.7
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 5.5e-21 105.1 133 45.1
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 5.5e-21 105.1 133 45.1
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 5.5e-21 105.1 133 45.1
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 7.2e-21 104.8 136 47.1
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 9.4e-21 104.4 129 45.0
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 9.4e-21 104.4 137 46.0
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 9.4e-21 104.4 119 47.9
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 9.4e-21 104.4 138 44.9
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 1.2e-20 104.0 137 46.0
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 1.2e-20 104.0 65 76.9
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 1.6e-20 103.6 137 45.3
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 1.6e-20 103.6 137 43.8
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 2.1e-20 103.2 130 46.9
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 2.7e-20 102.8 150 43.3
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 3.6e-20 102.4 59 81.4
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 6.1e-20 101.7 137 45.3
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 6.1e-20 101.7 126 48.4
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 6.1e-20 101.7 140 45.7
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 6.1e-20 101.7 137 43.1
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 6.1e-20 101.7 149 43.0
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 8.0e-20 101.3 137 45.3
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 8.0e-20 101.3 128 44.5
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 8.0e-20 101.3 134 46.3
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 1.0e-19 100.9 72 70.8
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.0e-19 100.9 149 43.0
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 1.4e-19 100.5 59 79.7
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 1.4e-19 100.5 133 44.4
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 1.8e-19 100.1 59 79.7
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 2.3e-19 99.8 137 43.8
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 2.3e-19 99.8 137 43.8
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 2.3e-19 99.8 137 43.8
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 2.3e-19 99.8 138 42.0
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 3.0e-19 99.4 72 66.7
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 3.0e-19 99.4 148 42.6
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 4.0e-19 99.0 133 42.1
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 4.0e-19 99.0 139 41.7
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 5.2e-19 98.6 134 43.3
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 5.2e-19 98.6 126 43.7
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 5.2e-19 98.6 126 43.7
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 5.2e-19 98.6 133 45.1
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 6.8e-19 98.2 71 70.4
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 6.8e-19 98.2 131 45.0
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 2.0e-18 96.7 59 74.6
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 2.0e-18 96.7 137 40.9
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 2.6e-18 96.3 62 72.6
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 2.6e-18 96.3 62 72.6
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 3.4e-18 95.9 141 44.7
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 4.4e-18 95.5 131 43.5
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 4.4e-18 95.5 58 75.9
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 4.4e-18 95.5 58 75.9
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 4.4e-18 95.5 59 72.9
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 4.4e-18 95.5 130 44.6
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 5.7e-18 95.1 62 71.0
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 5.7e-18 95.1 62 71.0
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 7.5e-18 94.7 152 40.8
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 1.7e-17 93.6 137 40.9
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.7e-17 93.6 130 44.6
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 1.7e-17 93.6 59 76.3
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 2.2e-17 93.2 140 41.4
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 2.2e-17 93.2 130 43.8
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 4.8e-17 92.0 59 69.5
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 8.3e-17 91.3 62 62.9
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 1.1e-16 90.9 65 66.2
SpUn0233_0020 Schrenkiella parvula HOM05D005088 ORTHO05D006914 1.4e-16 90.5 136 43.4
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 1.8e-16 90.1 126 41.3
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 1.8e-16 90.1 139 41.7
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 9.1e-16 87.8 125 41.6
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 2.0e-15 86.7 59 66.1
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 1.7e-14 83.6 158 38.0
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 6.1e-12 75.1 59 54.2
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 7.5e-10 68.2 41 70.7


User provided reference genes

Program Settings