Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 0.0e+00 1365.1 720 100.0
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 3.0e-150 536.6 791 43.7
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 9.6e-149 531.6 759 45.3
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 1.5e-141 507.7 781 43.8
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 6.9e-139 498.8 807 42.4
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 6.5e-137 492.3 799 42.8
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 7.1e-136 488.8 780 42.4
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 3.9e-134 483.0 786 42.4
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 8.7e-134 481.9 791 41.7
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 1.1e-133 481.5 790 41.1
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 9.7e-133 478.4 798 41.4
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 7.7e-130 468.8 781 41.5
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 1.3e-129 468.0 798 41.0
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 2.2e-129 467.2 784 41.5
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 6.5e-129 465.7 752 41.9
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 8.5e-129 465.3 787 41.0
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 1.1e-128 464.9 796 41.0
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 1.1e-128 464.9 846 39.8
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 7.2e-128 462.2 784 40.2
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 2.7e-127 460.3 781 40.7
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 4.6e-127 459.5 786 40.3
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 7.9e-127 458.8 777 41.1
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 3.9e-126 456.4 742 41.8
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 1.5e-125 454.5 785 40.5
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 1.3e-124 451.4 800 40.5
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 2.2e-124 450.7 797 39.1
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 2.4e-123 447.2 774 39.9
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 6.9e-123 445.7 787 39.6
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 1.2e-122 444.9 788 40.0
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 2.0e-122 444.1 796 38.4
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 2.0e-122 444.1 760 40.8
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 7.7e-122 442.2 785 39.6
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 1.7e-121 441.0 779 39.8
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 5.0e-121 439.5 803 39.6
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 5.0e-121 439.5 788 38.6
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 5.0e-121 439.5 782 40.2
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 5.0e-121 439.5 785 39.5
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 6.5e-121 439.1 802 38.5
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 1.9e-120 437.6 802 38.4
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 1.6e-119 434.5 796 38.2
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 4.7e-119 433.0 783 39.2
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 7.9e-119 432.2 795 37.5
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 5.1e-118 429.5 789 38.1
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 8.8e-118 428.7 809 38.3
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 3.3e-117 426.8 744 40.9
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 1.7e-116 424.5 788 39.2
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 2.8e-116 423.7 773 38.3
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 3.7e-116 423.3 783 38.8
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 3.7e-116 423.3 784 38.9
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 8.2e-116 422.2 791 38.2
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 1.4e-115 421.4 791 37.9
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 1.8e-115 421.0 784 38.9
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 5.3e-115 419.5 793 39.6
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 1.5e-114 417.9 757 39.6
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 2.9e-113 413.7 786 40.8
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 5.0e-113 412.9 784 37.2
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 6.5e-113 412.5 778 38.6
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 8.5e-113 412.1 785 38.3
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 1.4e-112 411.4 794 38.4
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 1.4e-110 404.8 816 37.7
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 2.0e-109 401.0 783 37.9
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 4.4e-109 399.8 788 38.1
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 1.3e-108 398.3 785 36.9
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 1.8e-107 394.4 769 37.7
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 1.3e-105 388.3 800 37.8
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 2.2e-105 387.5 786 37.7
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 3.8e-105 386.7 763 36.8
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 3.8e-105 386.7 791 36.5
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 3.2e-104 383.6 752 37.9
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 9.7e-101 372.1 801 36.6
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 2.8e-100 370.5 784 36.0
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 4.1e-99 366.7 702 38.0
Lsat_1_v5_gn_5_37760 Lactuca sativa HOM05D005810 ORTHO05D007279 3.8e-97 360.1 657 40.8
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 4.7e-95 353.2 766 36.8
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 2.0e-93 347.8 725 36.0
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 2.0e-93 347.8 757 34.9
CiPaw.07G064800 Carya illinoinensis HOM05D005810 ORTHO05D007279 3.7e-92 343.6 611 38.6
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 6.3e-92 342.8 753 36.5
Cc02_g31830 Coffea canephora HOM05D005810 ORTHO05D007279 3.1e-91 340.5 498 45.6
CsaV3_1G045590 Cucumis sativus L. HOM05D005810 ORTHO05D007279 2.8e-87 327.4 599 39.6
Manes.09G154600 Manihot esculenta HOM05D005810 ORTHO05D007279 2.3e-86 324.3 501 44.5
Manes.08G132300 Manihot esculenta HOM05D005810 ORTHO05D007279 7.5e-85 319.3 615 37.6
Sc09g0003830 Simmondsia chinensis HOM05D005810 ORTHO05D007279 7.0e-83 312.8 599 37.7
Dinv13660 Davidia involucrata HOM05D005810 ORTHO05D007279 1.3e-81 308.5 400 46.2
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 7.3e-80 302.8 785 32.2
Atru.chr2.784 Acer truncatum HOM05D005810 ORTHO05D007279 7.0e-75 286.2 448 42.2
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 1.5e-72 278.5 811 31.2
Nitab4.5_0005729g0060 Nicotiana tabacum HOM05D005810 ORTHO05D007279 2.8e-71 274.2 192 70.8
SGA_v2.0_scaffold92G28303 Striga asiatica HOM05D005810 ORTHO05D007279 2.3e-70 271.2 191 70.2
Solyc01g097600.2 Solanum lycopersicum HOM05D005810 ORTHO05D007279 2.2e-68 264.6 200 66.5
TAR365G0727 Trochodendron aralioides HOM05D005810 ORTHO05D007279 6.4e-68 263.1 394 42.6
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 8.3e-68 262.7 657 34.7
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 4.1e-67 260.4 806 31.0
Sopen01g041230 Solanum pennellii HOM05D005810 ORTHO05D007279 7.0e-67 259.6 200 65.5
Eucgr.B02108 Eucalyptus grandis HOM05D005810 ORTHO05D007279 7.8e-66 256.1 396 41.4
Haze_04339 Corylus avellana HOM05D005810 ORTHO05D007279 7.3e-64 249.6 199 62.8
FAN14G4259 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.6e-63 248.4 198 61.6
FAN05G0700 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.4e-62 245.4 198 61.1
FAN02G1150 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.3e-60 238.8 198 59.6
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 3.2e-59 234.2 808 28.7
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 7.1e-51 206.5 757 28.1
Dinv13659 Davidia involucrata HOM05D005810 ORTHO05D007279 1.9e-48 198.4 200 52.5
Nitab4.5_0005729g0070 Nicotiana tabacum HOM05D005810 ORTHO05D007279 4.3e-48 197.2 374 37.7
AagrBONN_evm.TU.Sc2ySwM_362.2882 Anthoceros agrestis HOM05D005810 ORTHO05D007279 3.6e-47 194.1 394 33.8
Haze_04340 Corylus avellana HOM05D005810 ORTHO05D007279 4.8e-47 193.7 344 38.1
CBR_g36821 Chara braunii HOM05D005810 ORTHO05D007279 5.8e-45 186.8 830 25.7
Cc02_g31840 Coffea canephora HOM05D005810 ORTHO05D007279 1.3e-44 185.7 216 51.4
TPR.G21485 Trifolium pratense HOM05D005810 ORTHO05D007279 1.4e-43 182.2 167 57.5
Os05g0509300 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 3.5e-42 177.6 207 45.4
AagrBONN_evm.TU.Sc2ySwM_362.2883 Anthoceros agrestis HOM05D005810 ORTHO05D007279 9.6e-40 169.5 220 45.9
Zm00001eb352870 Zea mays HOM05D005810 ORTHO05D007279 2.6e-37 161.4 213 40.8
Os01g0773000 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 7.6e-37 159.8 205 43.9
CsaV3_UNG004080 Cucumis sativus L. HOM05D005810 ORTHO05D007279 3.2e-35 154.5 234 38.9
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 1.0e-33 149.4 850 24.6
Atru.chr2.785 Acer truncatum HOM05D005810 ORTHO05D007279 1.9e-32 145.2 111 62.2
CsaV3_UNG004060 Cucumis sativus L. HOM05D005810 ORTHO05D007279 2.0e-29 135.2 144 52.1
ClCG06G009160 Citrullus lanatus HOM05D005810 ORTHO05D007279 1.7e-28 132.1 150 50.0
FAN09G1409 Fragaria x ananassa HOM05D005810 ORTHO05D007279 7.9e-26 123.2 162 49.4
CsaV3_1G045610 Cucumis sativus L. HOM05D005810 ORTHO05D007279 3.9e-25 120.9 136 50.0
Sopen01g041220 Solanum pennellii HOM05D005810 ORTHO05D007279 3.9e-25 120.9 138 50.7
Hma1.2p1_0083F.1_g042850 Hydrangea macrophylla HOM05D005810 ORTHO05D007279 1.5e-24 119.0 142 52.1
HPP92_018612 Vanilla planifolia HOM05D005810 ORTHO05D007279 2.6e-21 108.2 64 71.9
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 1.1e-16 92.8 810 22.5
Cre01.g007651 Chlamydomonas reinhardtii HOM05D005810 ORTHO05D007279 1.3e-15 89.4 383 24.5
SHI07786 Sapria himalayana HOM05D005810 ORTHO05D007279 1.2e-13 82.8 52 75.0
Lsat_1_v5_gn_5_94521 Lactuca sativa HOM05D000428 ORTHO05D022850 5.1e-09 67.4 73 57.5
CiPaw.07G064900 Carya illinoinensis HOM05D005810 ORTHO05D007279 2.8e-07 61.6 35 91.4


User provided reference genes

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