Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 7.2e-256 886.7 439 100.0
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 4.6e-146 521.9 292 88.4
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 6.1e-146 521.5 292 87.7
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 7.9e-146 521.2 292 87.7
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 1.5e-144 516.9 291 88.7
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 3.3e-144 515.8 287 88.2
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 4.3e-144 515.4 291 88.3
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 4.3e-144 515.4 290 86.9
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 7.4e-144 514.6 292 86.0
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 9.7e-144 514.2 290 87.6
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 1.7e-143 513.5 292 86.3
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 2.2e-143 513.1 301 85.0
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 2.8e-143 512.7 288 87.8
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 2.8e-143 512.7 288 87.8
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 2.8e-143 512.7 292 86.3
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 4.8e-143 511.9 299 85.6
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 8.2e-143 511.1 290 87.6
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.4e-142 510.4 292 86.0
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 1.8e-142 510.0 307 84.0
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 1.8e-142 510.0 289 86.9
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 2.4e-142 509.6 290 86.2
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 2.4e-142 509.6 284 88.7
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 2.4e-142 509.6 292 87.0
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 3.1e-142 509.2 287 88.2
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 5.3e-142 508.4 287 87.1
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 5.3e-142 508.4 287 87.5
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 9.1e-142 507.7 292 86.6
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 2.0e-141 506.5 326 80.4
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 4.5e-141 505.4 287 86.4
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 5.9e-141 505.0 292 86.3
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 1.7e-140 503.4 290 86.6
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 2.9e-140 502.7 287 86.4
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 3.8e-140 502.3 290 86.6
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 1.1e-139 500.7 290 84.8
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 1.9e-139 500.0 287 86.8
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 3.2e-139 499.2 293 85.7
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 4.2e-139 498.8 290 84.5
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 4.2e-139 498.8 287 85.7
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 5.5e-139 498.4 287 84.7
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 5.5e-139 498.4 287 85.0
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 5.5e-139 498.4 290 84.8
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 7.2e-139 498.0 290 84.5
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.2e-138 497.3 290 84.1
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.6e-138 496.9 291 84.2
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 1.6e-138 496.9 287 86.1
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 2.1e-138 496.5 293 84.3
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 3.6e-138 495.7 291 83.2
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 7.9e-138 494.6 287 86.4
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 1.4e-137 493.8 291 84.5
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 2.3e-137 493.0 291 83.8
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 2.3e-137 493.0 287 85.4
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 3.9e-137 492.3 287 85.0
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 8.8e-137 491.1 288 84.4
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 1.5e-136 490.3 287 82.9
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 4.4e-136 488.8 288 82.3
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 4.4e-136 488.8 288 82.6
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 5.7e-136 488.4 290 83.8
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 9.7e-136 487.6 288 81.9
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 9.7e-136 487.6 290 82.8
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 1.3e-135 487.3 290 83.4
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 1.7e-135 486.9 288 81.9
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 2.8e-135 486.1 287 82.2
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 3.7e-135 485.7 290 84.5
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 4.8e-135 485.3 284 83.5
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 8.2e-135 484.6 288 81.6
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.1e-134 484.2 290 82.4
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 1.1e-134 484.2 290 81.0
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 1.1e-134 484.2 291 83.2
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 1.4e-134 483.8 288 81.9
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 1.4e-134 483.8 288 81.9
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 1.8e-134 483.4 288 82.6
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 2.4e-134 483.0 290 83.1
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 3.1e-134 482.6 290 80.7
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 3.1e-134 482.6 290 80.7
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 3.1e-134 482.6 288 82.3
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 3.1e-134 482.6 290 80.7
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 3.1e-134 482.6 288 81.6
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 4.1e-134 482.3 290 80.7
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 4.1e-134 482.3 290 80.7
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 5.3e-134 481.9 290 82.4
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 5.3e-134 481.9 287 84.0
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 1.2e-133 480.7 288 81.6
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 1.2e-133 480.7 304 81.9
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 2.6e-133 479.6 301 81.1
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 3.5e-133 479.2 290 80.7
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 5.9e-133 478.4 287 82.6
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 5.9e-133 478.4 291 82.5
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 1.0e-132 477.6 287 82.6
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.0e-132 477.6 290 82.1
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 1.3e-132 477.2 287 81.5
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 1.7e-132 476.9 290 82.8
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 2.9e-132 476.1 294 81.6
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 2.9e-132 476.1 288 81.6
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 3.8e-132 475.7 288 81.6
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 3.8e-132 475.7 288 81.9
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 5.0e-132 475.3 288 81.9
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 5.0e-132 475.3 288 82.6
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 6.5e-132 474.9 294 81.3
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 8.5e-132 474.6 287 82.6
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 1.5e-131 473.8 287 80.8
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 3.2e-131 472.6 288 80.9
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 3.2e-131 472.6 287 80.5
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 9.4e-131 471.1 288 82.3
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 1.2e-130 470.7 303 79.9
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 2.1e-130 469.9 287 80.1
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 1.8e-129 466.8 284 79.9
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 3.0e-129 466.1 298 77.9
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 1.1e-128 464.2 305 78.0
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 9.7e-128 461.1 284 79.2
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 1.7e-127 460.3 258 89.1
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 1.7e-127 460.3 284 78.5
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 2.2e-127 459.9 284 77.5
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 2.2e-127 459.9 445 58.7
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 3.1e-126 456.1 290 79.3
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 5.3e-126 455.3 288 78.1
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 5.3e-126 455.3 284 76.8
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 2.0e-125 453.4 284 77.1
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 5.9e-125 451.8 308 75.0
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 5.9e-125 451.8 290 79.0
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 2.9e-124 449.5 289 81.3
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 2.1e-122 443.4 326 70.2
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 6.1e-122 441.8 289 77.2
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 6.1e-122 441.8 287 74.6
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 6.1e-122 441.8 291 77.3
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 1.8e-121 440.3 287 76.0
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 1.7e-119 433.7 310 72.9
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 1.8e-118 430.3 284 74.6
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 4.1e-118 429.1 290 73.8
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 5.9e-117 425.2 229 90.4
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.3e-116 424.1 292 73.3
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.7e-116 423.7 292 72.9
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 2.9e-116 422.9 292 72.9
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 8.5e-116 421.4 234 86.8
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 1.1e-115 421.0 284 73.2
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 5.2e-113 412.1 253 78.7
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 1.3e-111 407.5 254 78.0
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.7e-111 407.1 288 68.8
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 6.3e-111 405.2 294 70.1
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 1.8e-110 403.7 286 67.5
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 3.1e-110 402.9 285 68.4
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 2.7e-109 399.8 288 67.0
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 1.7e-108 397.1 291 70.4
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 5.2e-105 385.6 295 70.2
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 1.2e-101 374.4 229 79.0
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 1.8e-97 360.5 288 62.5
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 8.6e-92 341.7 203 84.7
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 3.0e-84 316.6 270 63.7
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 7.3e-83 312.0 281 57.3
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 8.6e-76 288.5 287 51.9
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 4.3e-75 286.2 287 52.3
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 3.2e-70 270.0 284 48.6
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 1.6e-69 267.7 161 79.5
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 3.5e-69 266.5 286 47.2
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 3.1e-57 226.9 151 77.5
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 6.9e-57 225.7 150 72.0
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 8.4e-55 218.8 113 93.8
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 3.2e-54 216.9 140 78.6
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 7.4e-27 125.9 82 76.8
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 1.7e-26 124.8 124 54.0
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 1.2e-24 118.6 76 81.6
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 2.6e-24 117.5 161 43.5
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 2.9e-23 114.0 80 76.2
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 7.2e-22 109.4 76 76.3
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 2.7e-21 107.5 73 74.0
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 3.9e-20 103.6 52 94.2
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 5.1e-20 103.2 61 82.0
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 1.5e-19 101.7 146 44.5
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 1.3e-18 98.6 57 86.0
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 4.1e-17 93.6 70 67.1
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 1.9e-14 84.7 58 69.0
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 1.9e-14 84.7 58 69.0
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 9.7e-11 72.4 52 73.1
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 9.1e-09 65.9 65 60.0
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 1.0e-07 62.4 41 65.9
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 3.8e-07 60.5 38 78.9
MD08G1091900 Malus domestica HOM05D004135 ORTHO05D246351 9.4e-06 55.8 37 81.1


User provided reference genes

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