Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059439.1 Olea europaea HOM05D005358 ORTHO05D006384 2.0e-144 515.8 270 100.0
Oeu028563.1 Olea europaea HOM05D005358 ORTHO05D006384 7.1e-137 490.7 270 94.1
MSTRG.22407 Avicennia marina HOM05D005358 ORTHO05D006384 9.9e-115 417.2 273 82.1
SalBow6G1113 Salvia bowleyana HOM05D005358 ORTHO05D006384 1.2e-112 410.2 270 82.2
DCAR_003551 Daucus carota HOM05D005358 ORTHO05D006384 1.7e-111 406.4 273 81.0
CSS0039743 Camellia sinensis var. sinensis HOM05D005358 ORTHO05D006384 5.6e-110 401.4 270 79.6
CSS0043679 Camellia sinensis var. sinensis HOM05D005358 ORTHO05D006384 1.3e-109 400.2 270 78.1
CSS0029272 Camellia sinensis var. sinensis HOM05D005358 ORTHO05D006384 2.1e-109 399.4 270 79.3
Nitab4.5_0000322g0160 Nicotiana tabacum HOM05D005358 ORTHO05D006384 5.3e-108 394.8 279 77.8
Migut.C01123 Erythranthe guttata HOM05D005358 ORTHO05D006384 9.0e-108 394.0 270 78.9
Migut.N03279 Erythranthe guttata HOM05D005358 ORTHO05D006384 3.4e-107 392.1 270 78.5
Dinv07219 Davidia involucrata HOM05D005358 ORTHO05D006384 7.6e-107 391.0 273 77.7
Nn5g28290 Nelumbo nucifera HOM05D005358 ORTHO05D006384 7.6e-107 391.0 276 75.7
CiPaw.05G221300 Carya illinoinensis HOM05D005358 ORTHO05D006384 1.3e-106 390.2 274 75.2
Solyc06g060340.3 Solanum lycopersicum HOM05D005358 ORTHO05D006384 1.3e-106 390.2 280 75.4
Cc10_g11890 Coffea canephora HOM05D005358 ORTHO05D006384 1.7e-106 389.8 274 75.9
Sopen06g020470 Solanum pennellii HOM05D005358 ORTHO05D006384 1.7e-106 389.8 280 75.0
MD15G1348200 Malus domestica HOM05D005358 ORTHO05D006384 3.8e-106 388.7 274 74.8
PSO528G0145 Papaver somniferum HOM05D005358 ORTHO05D006384 6.4e-106 387.9 274 76.3
PGSC0003DMG400017556 Solanum tuberosum HOM05D005358 ORTHO05D006384 3.2e-105 385.6 280 74.3
Duzib116G0356 Durio zibethinus HOM05D005358 ORTHO05D006384 4.2e-105 385.2 276 73.9
COL.COLO4_08077 Corchorus olitorius HOM05D005358 ORTHO05D006384 5.4e-105 384.8 278 75.2
GSVIVG01008866001 Vitis vinifera HOM05D005358 ORTHO05D006384 7.1e-105 384.4 274 77.0
TAR628G0971 Trochodendron aralioides HOM05D005358 ORTHO05D006384 9.3e-105 384.0 277 74.0
Cfa016019 Carpinus fangiana HOM05D005358 ORTHO05D006384 1.2e-104 383.6 275 73.1
CiPaw.06G031000 Carya illinoinensis HOM05D005358 ORTHO05D006384 2.7e-104 382.5 265 74.7
Lsat_1_v5_gn_6_35480 Lactuca sativa HOM05D005358 ORTHO05D006384 6.0e-104 381.3 271 75.3
QL09p034583 Quercus lobata HOM05D005358 ORTHO05D006384 1.3e-103 380.2 268 75.4
Sabra02G0065500 Salix brachista HOM05D005358 ORTHO05D006384 1.3e-103 380.2 274 75.2
SGA_v2.0_scaffold25G11130 Striga asiatica HOM05D005358 ORTHO05D006384 1.8e-103 379.8 249 81.5
Aqoxy6G00218 Aquilegia oxysepala HOM05D005358 ORTHO05D006384 3.9e-103 378.6 273 72.5
MBI16_g07664_MAGBIO Magnolia biondii HOM05D005358 ORTHO05D006384 3.9e-103 378.6 277 74.4
Gohir.D01G180400 Gossypium hirsutum HOM05D005358 ORTHO05D006384 5.1e-103 378.3 277 73.3
Gorai.002G222200 Gossypium raimondii HOM05D005358 ORTHO05D006384 5.1e-103 378.3 277 73.3
Prupe.1G497100 Prunus persica HOM05D005358 ORTHO05D006384 5.1e-103 378.3 279 73.5
ECA233G3168 Erigeron canadensis HOM05D005358 ORTHO05D006384 8.7e-103 377.5 259 78.4
Gohir.A01G189100 Gossypium hirsutum HOM05D005358 ORTHO05D006384 8.7e-103 377.5 277 73.3
Duzib093G1131 Durio zibethinus HOM05D005358 ORTHO05D006384 1.1e-102 377.1 276 72.8
HanXRQChr02g0053151 Helianthus annuus HOM05D005358 ORTHO05D006384 1.1e-102 377.1 273 74.7
Lj1g0002097 Lotus japonicus HOM05D005358 ORTHO05D006384 1.5e-102 376.7 276 76.4
unitig_46.g18102 Utricularia gibba HOM05D005358 ORTHO05D006384 1.9e-102 376.3 274 78.8
CANSAT25G3496 Cannabis sativa HOM05D005358 ORTHO05D006384 2.5e-102 375.9 274 74.1
CAN.G1040.10 Capsicum annuum HOM05D005358 ORTHO05D006384 2.5e-102 375.9 280 73.2
FAN20G2528 Fragaria x ananassa HOM05D005358 ORTHO05D006384 5.6e-102 374.8 275 73.5
PSO170G3857 Papaver somniferum HOM05D005358 ORTHO05D006384 7.4e-102 374.4 274 74.1
Actinidia03469 Actinidia chinensis HOM05D005358 ORTHO05D006384 9.6e-102 374.0 270 74.8
vmacro12532 Vaccinium macrocarpon HOM05D005358 ORTHO05D006384 1.3e-101 373.6 270 77.0
FAN27G1910 Fragaria x ananassa HOM05D005358 ORTHO05D006384 2.1e-101 372.9 275 72.7
MD08G1162600 Malus domestica HOM05D005358 ORTHO05D006384 2.1e-101 372.9 278 73.0
RcHm_v2.0_Chr6g0295831 Rosa chinensis HOM05D005358 ORTHO05D006384 2.8e-101 372.5 275 73.8
FAN15G1035 Fragaria x ananassa HOM05D005358 ORTHO05D006384 3.7e-101 372.1 275 72.7
HanXRQChr02g0053161 Helianthus annuus HOM05D005358 ORTHO05D006384 6.2e-101 371.3 271 73.4
Lalb_Chr11g0065911 Lupinus albus HOM05D005358 ORTHO05D006384 6.2e-101 371.3 276 73.2
Thecc.08G125500 Theobroma cacao HOM05D005358 ORTHO05D006384 6.2e-101 371.3 276 72.5
Gohir.A05G235100 Gossypium hirsutum HOM05D005358 ORTHO05D006384 1.8e-100 369.8 275 71.6
Potri.002G083500 Populus trichocarpa HOM05D005358 ORTHO05D006384 3.1e-100 369.0 276 72.8
TWI34G1827 Tripterygium wilfordii HOM05D005358 ORTHO05D006384 4.0e-100 368.6 274 73.0
VMungo1309G1077 Vigna mungo HOM05D005358 ORTHO05D006384 4.0e-100 368.6 273 75.1
Glyma.04G249700 Glycine max HOM05D005358 ORTHO05D006384 5.3e-100 368.2 274 74.1
Glyma.06G113200 Glycine max HOM05D005358 ORTHO05D006384 6.9e-100 367.9 274 74.1
arahy.Tifrunner.gnm1.ann1.L9FPHH Arachis hypogaea HOM05D005358 ORTHO05D006384 1.5e-99 366.7 277 75.1
FAN24G1660 Fragaria x ananassa HOM05D005358 ORTHO05D006384 1.5e-99 366.7 275 73.1
PGR042G4000 Punica granatum HOM05D005358 ORTHO05D006384 1.5e-99 366.7 279 70.3
Gohir.D05G237400 Gossypium hirsutum HOM05D005358 ORTHO05D006384 2.0e-99 366.3 275 71.3
Phvul.009G125100 Phaseolus vulgaris HOM05D005358 ORTHO05D006384 4.5e-99 365.2 270 73.7
Nitab4.5_0004044g0020 Nicotiana tabacum HOM05D005358 ORTHO05D006384 7.6e-99 364.4 282 71.3
Cpa.g.sc64.88 Carica papaya HOM05D005358 ORTHO05D006384 1.0e-98 364.0 276 71.7
Gorai.009G245800 Gossypium raimondii HOM05D005358 ORTHO05D006384 1.0e-98 364.0 275 71.3
ATR0584G037 Amborella trichopoda HOM05D005358 ORTHO05D006384 1.3e-98 363.6 270 72.2
Psat5g087360 Pisum sativum HOM05D005358 ORTHO05D006384 1.7e-98 363.2 275 73.5
Sabra05G0134400 Salix brachista HOM05D005358 ORTHO05D006384 1.7e-98 363.2 273 71.8
CDE02G0325 Ceratophyllum demersum HOM05D005358 ORTHO05D006384 3.8e-98 362.1 274 73.4
HPP92_025043 Vanilla planifolia HOM05D005358 ORTHO05D006384 6.5e-98 361.3 261 73.9
Medtr3g088040 Medicago truncatula HOM05D005358 ORTHO05D006384 8.4e-98 360.9 276 74.6
TPR.G21057 Trifolium pratense HOM05D005358 ORTHO05D006384 1.9e-97 359.8 274 73.4
Sed0008649 Sechium edule HOM05D005358 ORTHO05D006384 2.5e-97 359.4 273 72.9
Os01g0869800 Oryza sativa ssp. japonica HOM05D005358 ORTHO05D006384 3.2e-97 359.0 273 72.9
Sc01g0006700 Simmondsia chinensis HOM05D005358 ORTHO05D006384 3.2e-97 359.0 272 70.2
Ciclev10002099m.g Citrus clementina HOM05D005358 ORTHO05D006384 5.5e-97 358.2 282 69.5
Lj7A340T34 Lonicera japonica HOM05D005358 ORTHO05D006384 5.5e-97 358.2 271 73.1
Lju12250A0T27 Lonicera japonica HOM05D005358 ORTHO05D006384 5.5e-97 358.2 271 73.1
Eucgr.F03789 Eucalyptus grandis HOM05D005358 ORTHO05D006384 1.2e-96 357.1 271 72.7
Rhsim06G0103300 Rhododendron simsii HOM05D005358 ORTHO05D006384 1.2e-96 357.1 274 73.7
TAR376G0195 Trochodendron aralioides HOM05D005358 ORTHO05D006384 4.6e-96 355.1 273 71.8
CsaV3_6G034480 Cucumis sativus L. HOM05D005358 ORTHO05D006384 6.7e-95 351.3 277 70.0
Peaxi162Scf00051g00910 Petunia axillaris HOM05D005358 ORTHO05D006384 8.7e-95 350.9 276 69.6
ClCG08G005640 Citrullus lanatus HOM05D005358 ORTHO05D006384 1.5e-94 350.1 273 71.4
MELO3C010608.2 Cucumis melo HOM05D005358 ORTHO05D006384 5.7e-94 348.2 272 71.0
THA.LOC104817350 Tarenaya hassleriana HOM05D005358 ORTHO05D006384 1.3e-93 347.1 273 70.7
arahy.Tifrunner.gnm1.ann1.QP7RRL Arachis hypogaea HOM05D005358 ORTHO05D006384 1.6e-93 346.7 277 72.2
FvH4_2g26970 Fragaria vesca HOM05D005358 ORTHO05D006384 1.8e-92 343.2 229 79.0
AUR62019079 Chenopodium quinoa HOM05D005358 ORTHO05D006384 5.3e-92 341.7 197 87.3
Os04g0690800 Oryza sativa ssp. japonica HOM05D005358 ORTHO05D006384 6.9e-92 341.3 215 82.8
Hund26809 Selenicereus undatus HOM05D005358 ORTHO05D006384 6.9e-92 341.3 274 70.1
CARHR035950 Cardamine hirsuta HOM05D005358 ORTHO05D006384 1.5e-91 340.1 274 69.3
Sp1g33560 Schrenkiella parvula HOM05D005358 ORTHO05D006384 3.4e-91 339.0 274 69.7
BcaB07g33947 Brassica carinata HOM05D005358 ORTHO05D006384 5.8e-91 338.2 272 69.1
BcaC08g42851 Brassica carinata HOM05D005358 ORTHO05D006384 7.6e-91 337.8 272 69.9
A10p07510 Brassica napus HOM05D005358 ORTHO05D006384 7.6e-91 337.8 272 69.9
C06p00660 Brassica napus HOM05D005358 ORTHO05D006384 7.6e-91 337.8 272 69.9
BraSC36t46054Z Brassica rapa HOM05D005358 ORTHO05D006384 7.6e-91 337.8 272 69.9
SEGI_26351 Sequoiadendron giganteum HOM05D005358 ORTHO05D006384 7.6e-91 337.8 243 76.5
BcaB04g17587 Brassica carinata HOM05D005358 ORTHO05D006384 1.3e-90 337.0 271 69.4
AT1G44575 Arabidopsis thaliana HOM05D005358 ORTHO05D006384 1.7e-90 336.7 272 69.1
Aa31LG6G9330 Aethionema arabicum HOM05D005358 ORTHO05D006384 2.2e-90 336.3 275 69.5
A08p06370 Brassica napus HOM05D005358 ORTHO05D006384 2.2e-90 336.3 271 69.4
BraA08t32644Z Brassica rapa HOM05D005358 ORTHO05D006384 2.2e-90 336.3 271 69.4
Zm00001eb146510 Zea mays HOM05D005358 ORTHO05D006384 2.2e-90 336.3 192 87.0
BcaC07g37296 Brassica carinata HOM05D005358 ORTHO05D006384 2.9e-90 335.9 271 69.4
BolC6t35202H Brassica oleracea HOM05D005358 ORTHO05D006384 2.9e-90 335.9 272 69.5
BolC8t47572H Brassica oleracea HOM05D005358 ORTHO05D006384 2.9e-90 335.9 271 69.4
Atru.chr13.1462 Acer truncatum HOM05D005358 ORTHO05D006384 6.5e-90 334.7 277 68.6
Atru.chr13.1484 Acer truncatum HOM05D005358 ORTHO05D006384 6.5e-90 334.7 277 68.6
C08p07310 Brassica napus HOM05D005358 ORTHO05D006384 6.5e-90 334.7 271 69.4
Carub.0001s3521 Capsella rubella HOM05D005358 ORTHO05D006384 1.1e-89 334.0 271 69.4
AL1G52370 Arabidopsis lyrata HOM05D005358 ORTHO05D006384 1.9e-89 333.2 219 79.0
Thhalv10011718m.g Eutrema salsugineum HOM05D005358 ORTHO05D006384 2.5e-89 332.8 273 69.6
Pp3c20_23430 Physcomitrium patens HOM05D005358 ORTHO05D006384 2.4e-84 316.2 221 73.8
SMO146G0179 Selaginella moellendorffii HOM05D005358 ORTHO05D006384 4.5e-83 312.0 197 79.2
AagrBONN_evm.TU.Sc2ySwM_368.1869 Anthoceros agrestis HOM05D005358 ORTHO05D006384 3.9e-79 298.9 228 68.9
Mapoly0013s0199 Marchantia polymorpha HOM05D005358 ORTHO05D006384 1.1e-78 297.4 282 61.7
CDE08G0239 Ceratophyllum demersum HOM05D005358 ORTHO05D006384 9.1e-76 287.7 240 69.2
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 2.7e-72 276.2 168 82.1
Dinv27311 Davidia involucrata HOM05D005358 ORTHO05D006384 3.1e-68 262.7 190 76.8
Haze_00439 Corylus avellana HOM05D005358 ORTHO05D006384 7.4e-62 241.5 160 75.6
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 1.3e-61 240.7 161 73.9
Manes.18G077312 Manihot esculenta HOM05D005358 ORTHO05D006384 4.8e-61 238.8 194 68.6
Ah.05g171100 Amaranthus hybridus HOM05D005358 ORTHO05D006384 4.5e-59 232.3 134 88.1
Ca_16558_v3 Cicer arietinum L. HOM05D005358 ORTHO05D006384 2.2e-58 229.9 199 69.8
CBR_g40031 Chara braunii HOM05D005358 ORTHO05D006384 3.8e-58 229.2 164 68.9
EL10Ac1g01011 Beta vulgaris HOM05D005358 ORTHO05D006384 1.5e-49 200.7 273 48.4
Actinidia29466 Actinidia chinensis HOM05D005358 ORTHO05D006384 8.6e-42 174.9 150 67.3
CDE06G0290 Ceratophyllum demersum HOM05D005358 ORTHO05D006384 4.2e-41 172.6 117 73.5
Glyma.13G078900 Glycine max HOM05D004548 ORTHO05D005402 3.6e-40 169.5 227 49.8
Cre01.g016600 Chlamydomonas reinhardtii HOM05D005358 ORTHO05D006384 1.8e-36 157.1 233 45.1
Cre01.g016750 Chlamydomonas reinhardtii HOM05D005358 ORTHO05D006384 1.8e-36 157.1 233 45.1
EL10Ac5g12375 Beta vulgaris HOM05D005358 ORTHO05D006384 2.3e-34 150.2 96 77.1
FAN08G1189 Fragaria x ananassa HOM05D005358 ORTHO05D006384 3.5e-19 99.8 81 70.4
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 3.9e-18 96.3 111 55.0
Cre03.g146147 Chlamydomonas reinhardtii HOM05D005358 ORTHO05D006384 9.2e-12 75.1 181 32.0
PRCOL_00001561 Prasinoderma coloniale HOM05D005358 ORTHO05D006384 6.6e-10 68.9 188 30.3
MCO14G314 Micromonas commoda HOM05D005358 ORTHO05D006384 1.8e-07 60.8 65 53.8
MELO3C030542.2 Cucumis melo HOM05D005358 ORTHO05D006384 3.1e-07 60.1 38 76.3
Pp3c7_6810 Physcomitrium patens HOM05D041339 ORTHO05D031170 6.8e-07 58.9 99 42.4
Pp3c11_21590 Physcomitrium patens HOM05D041339 ORTHO05D031170 8.9e-07 58.5 99 42.4
MELO3C031367.2 Cucumis melo HOM05D005358 ORTHO05D006384 1.5e-06 57.8 38 76.3


User provided reference genes

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