Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 2.1e-227 792.0 391 100.0
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 7.6e-140 501.1 381 66.4
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 1.1e-138 497.3 383 64.8
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 1.4e-138 496.9 381 66.4
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 2.4e-138 496.1 381 66.7
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 4.1e-138 495.4 387 66.4
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 2.3e-136 489.6 384 65.4
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 8.6e-136 487.6 381 66.7
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 1.1e-133 480.7 382 64.7
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 1.5e-132 476.9 388 63.9
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 2.0e-132 476.5 400 61.8
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 2.6e-132 476.1 383 65.0
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 1.3e-131 473.8 384 64.3
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 2.2e-131 473.0 386 62.7
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 2.7e-129 466.1 378 63.0
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 3.9e-128 462.2 416 58.2
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 8.7e-128 461.1 377 62.6
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 3.3e-127 459.1 385 62.6
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 7.3e-127 458.0 357 65.5
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 7.3e-127 458.0 384 62.2
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 9.6e-127 457.6 384 62.2
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 9.6e-127 457.6 383 63.2
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.6e-126 455.7 378 61.9
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 3.6e-126 455.7 384 63.0
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 4.8e-126 455.3 386 63.5
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 1.4e-125 453.8 378 63.2
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 1.8e-125 453.4 359 65.2
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 2.4e-125 453.0 389 60.9
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 5.3e-125 451.8 378 63.8
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 1.5e-124 450.3 384 62.0
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 9.9e-124 447.6 384 60.4
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 1.3e-123 447.2 381 63.0
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 1.7e-123 446.8 389 60.4
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 2.2e-123 446.4 382 60.7
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 2.4e-122 443.0 382 58.9
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 9.3e-122 441.0 407 59.0
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 1.2e-121 440.7 385 61.0
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 2.1e-121 439.9 382 61.0
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 4.6e-121 438.7 389 61.2
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 1.0e-120 437.6 387 60.7
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 3.0e-120 436.0 415 57.3
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 6.6e-120 434.9 383 60.6
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 1.1e-119 434.1 379 59.6
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 1.5e-119 433.7 388 59.3
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 4.8e-118 428.7 387 57.4
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 1.8e-117 426.8 379 59.1
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 5.3e-117 425.2 379 58.8
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 2.6e-116 422.9 379 58.3
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.6e-116 422.9 378 58.2
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 7.6e-116 421.4 388 58.0
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 7.6e-116 421.4 378 58.2
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 9.9e-116 421.0 354 62.7
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 1.3e-115 420.6 379 59.6
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 1.7e-115 420.2 388 59.0
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 2.2e-115 419.9 391 57.8
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 6.4e-115 418.3 356 59.8
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 1.1e-114 417.5 392 55.4
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 1.4e-114 417.2 384 58.6
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 4.6e-113 412.1 389 57.3
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 1.3e-112 410.6 387 57.4
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 1.8e-112 410.2 390 57.9
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 3.0e-112 409.5 390 57.4
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 6.7e-112 408.3 392 54.1
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 8.7e-112 407.9 382 59.4
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 1.9e-111 406.8 380 56.8
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 2.5e-111 406.4 394 55.6
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 4.3e-111 405.6 408 53.9
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 4.3e-111 405.6 378 57.4
Oeu056357.1 Olea europaea HOM05D005745 ORTHO05D006857 4.3e-111 405.6 200 99.5
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 9.6e-111 404.4 390 56.7
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 1.6e-110 403.7 377 57.0
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 2.1e-110 403.3 387 57.1
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 3.7e-110 402.5 352 61.6
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 8.1e-110 401.4 380 56.6
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 2.4e-109 399.8 382 55.0
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 3.4e-108 396.0 380 55.5
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 1.9e-106 390.2 386 55.2
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 1.9e-106 390.2 400 53.8
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 1.2e-105 387.5 384 54.7
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 7.9e-105 384.8 401 52.9
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 2.3e-104 383.3 357 55.2
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.1e-103 380.9 384 53.9
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 1.5e-103 380.6 402 51.7
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 8.2e-102 374.8 338 59.8
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 8.2e-102 374.8 322 60.6
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 1.2e-100 370.9 343 57.7
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 7.6e-100 368.2 377 53.3
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 2.2e-99 366.7 316 60.1
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 3.0e-96 356.3 383 52.2
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 9.7e-95 351.3 407 49.9
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.4e-93 347.4 387 52.5
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 2.2e-91 340.1 352 55.1
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 1.4e-90 337.4 300 58.3
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 3.9e-88 329.3 313 57.5
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 3.4e-84 316.2 378 49.7
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 2.8e-78 296.6 379 47.2
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 2.2e-75 287.0 378 45.0
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.9e-74 283.9 283 54.8
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 2.1e-73 280.4 242 61.2
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 3.0e-72 276.6 348 47.7
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 1.1e-71 274.6 243 59.7
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 3.3e-71 273.1 466 38.2
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 2.4e-69 266.9 183 70.5
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 2.0e-68 263.8 482 36.9
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 3.0e-64 250.0 193 62.7
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 8.8e-64 248.4 440 36.8
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.0e-63 247.3 180 65.6
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 6.3e-62 242.3 311 46.9
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 2.4e-61 240.4 254 53.9
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 2.4e-61 240.4 355 43.1
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 4.2e-58 229.6 241 53.1
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 1.2e-55 221.5 266 48.1
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 7.5e-55 218.8 187 61.5
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 1.3e-51 208.0 184 57.1
MD07G1140200 Malus domestica HOM05D005745 ORTHO05D006857 4.3e-50 203.0 296 43.9
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 1.4e-45 188.0 300 41.7
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 1.4e-45 188.0 264 42.8
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 1.4e-45 188.0 185 53.5
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 1.7e-43 181.0 162 59.3
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 1.9e-42 177.6 461 33.2
Oeu056356.1 Olea europaea HOM05D005745 ORTHO05D006857 5.6e-42 176.0 95 94.7
Prupe.2G164500 Prunus persica HOM05D005745 ORTHO05D006857 1.2e-36 158.3 153 55.6
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 2.0e-36 157.5 161 51.6
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 8.1e-33 145.6 122 58.2
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 1.8e-32 144.4 792 23.1
AUR62019766 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.3e-32 144.1 108 61.1
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 4.0e-32 143.3 418 30.4
Atru.chr5.475 Acer truncatum HOM05D005745 ORTHO05D006857 5.2e-32 142.9 88 77.3
FAN01G0854 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.0e-27 127.1 151 49.0
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 4.3e-26 123.2 86 69.8
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 2.8e-25 120.6 108 57.4
EL10Ac7g17708 Beta vulgaris HOM05D005745 ORTHO05D006857 6.2e-25 119.4 93 64.5
Glyma.03G013550 Glycine max HOM05D005745 ORTHO05D006857 8.1e-25 119.0 90 65.6
COL.COLO4_12683 Corchorus olitorius HOM05D000683 ORTHO05D000507 3.1e-24 117.1 135 48.9
MCO14G396 Micromonas commoda HOM05D005745 ORTHO05D006857 1.8e-16 91.3 239 30.5
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 4.0e-16 90.1 96 53.1
MCO15G493 Micromonas commoda HOM05D005745 ORTHO05D006857 3.4e-15 87.0 325 27.4
PRCOL_00001873 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 5.4e-13 79.7 273 27.1
ATR0594G209 Amborella trichopoda HOM05D005745 ORTHO05D006857 4.9e-06 56.6 32 81.2


User provided reference genes

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