Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056356.1 Olea europaea HOM05D005745 ORTHO05D006857 6.0e-80 300.8 157 100.0
Oeu056357.1 Olea europaea HOM05D005745 ORTHO05D006857 1.4e-60 236.5 129 96.1
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 5.0e-42 174.9 95 94.7
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 2.7e-32 142.5 112 69.6
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 3.0e-31 139.0 98 72.4
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 3.0e-31 139.0 99 71.7
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 1.5e-30 136.7 131 60.3
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 2.6e-30 136.0 115 62.6
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 5.7e-30 134.8 98 70.4
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 7.5e-30 134.4 105 66.7
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 1.3e-29 133.7 102 70.6
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 1.3e-29 133.7 107 67.3
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 2.8e-29 132.5 81 81.5
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 3.7e-29 132.1 101 70.3
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 3.7e-29 132.1 108 66.7
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 3.7e-29 132.1 95 70.5
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 6.3e-29 131.3 81 80.2
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 6.3e-29 131.3 94 71.3
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 8.2e-29 131.0 88 72.7
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 8.2e-29 131.0 100 69.0
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 8.2e-29 131.0 99 70.7
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 1.1e-28 130.6 113 62.8
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 1.1e-28 130.6 88 75.0
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.4e-28 130.2 81 79.0
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 1.4e-28 130.2 125 56.8
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 1.4e-28 130.2 85 74.1
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 2.4e-28 129.4 86 75.6
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 2.4e-28 129.4 105 63.8
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 2.4e-28 129.4 95 69.5
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 2.4e-28 129.4 102 68.6
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 2.4e-28 129.4 87 73.6
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 3.1e-28 129.0 100 70.0
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.1e-28 129.0 81 79.0
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 4.1e-28 128.6 85 76.5
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 4.1e-28 128.6 81 79.0
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 7.0e-28 127.9 85 76.5
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 9.1e-28 127.5 99 66.7
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 9.1e-28 127.5 130 58.5
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 9.1e-28 127.5 84 75.0
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 1.2e-27 127.1 98 71.4
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 1.6e-27 126.7 102 66.7
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 1.6e-27 126.7 100 67.0
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 1.6e-27 126.7 120 60.0
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 2.0e-27 126.3 101 68.3
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 2.0e-27 126.3 111 61.3
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 2.0e-27 126.3 86 76.7
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 2.7e-27 125.9 81 77.8
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 2.7e-27 125.9 118 57.6
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 3.5e-27 125.6 113 57.5
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 3.5e-27 125.6 81 80.2
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 3.5e-27 125.6 96 67.7
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 3.5e-27 125.6 81 77.8
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 4.5e-27 125.2 85 68.2
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 5.9e-27 124.8 99 66.7
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 5.9e-27 124.8 95 63.2
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 7.7e-27 124.4 108 60.2
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 1.0e-26 124.0 86 72.1
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 1.0e-26 124.0 94 68.1
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 1.0e-26 124.0 116 60.3
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 1.0e-26 124.0 106 66.0
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 1.0e-26 124.0 85 76.5
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 1.3e-26 123.6 107 60.7
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 1.3e-26 123.6 85 76.5
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.7e-26 123.2 81 76.5
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.7e-26 123.2 81 76.5
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 2.2e-26 122.9 94 68.1
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 2.2e-26 122.9 105 62.9
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 2.9e-26 122.5 81 77.8
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.9e-26 122.5 81 76.5
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 2.9e-26 122.5 82 75.6
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.8e-26 122.1 88 70.5
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 3.8e-26 122.1 88 70.5
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 3.8e-26 122.1 93 64.5
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 5.0e-26 121.7 80 77.5
Glyma.03G013550 Glycine max HOM05D005745 ORTHO05D006857 6.5e-26 121.3 105 59.0
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 6.5e-26 121.3 81 72.8
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 1.5e-25 120.2 91 67.0
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 1.9e-25 119.8 88 68.2
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 2.5e-25 119.4 104 58.7
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 3.2e-25 119.0 81 72.8
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 5.5e-25 118.2 81 71.6
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 7.2e-25 117.9 81 72.8
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 7.2e-25 117.9 81 66.7
EL10Ac7g17708 Beta vulgaris HOM05D005745 ORTHO05D006857 9.4e-25 117.5 95 64.2
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 1.2e-24 117.1 105 58.1
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 1.2e-24 117.1 92 60.9
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 1.6e-24 116.7 92 62.0
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 1.6e-24 116.7 92 62.0
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 2.7e-24 115.9 92 59.8
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 3.6e-24 115.5 81 71.6
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 3.6e-24 115.5 94 62.8
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 6.1e-24 114.8 93 63.4
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 8.0e-24 114.4 92 60.9
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 8.0e-24 114.4 92 64.1
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 1.8e-23 113.2 93 62.4
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 2.6e-22 109.4 97 58.8
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 2.6e-22 109.4 91 60.4
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 2.8e-21 105.9 95 57.9
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 4.1e-20 102.1 100 57.0
FAN01G0854 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.5e-19 99.0 103 57.3
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 4.5e-19 98.6 88 62.5
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 4.5e-19 98.6 82 61.0
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 1.7e-18 96.7 81 60.5
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 1.7e-18 96.7 81 64.2
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 1.0e-15 87.4 81 56.8
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 2.3e-15 86.3 98 52.0
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 4.4e-14 82.0 89 53.9
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 6.3e-13 78.2 93 54.8
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 4.1e-12 75.5 163 34.4
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 2.0e-11 73.2 93 48.4
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 1.1e-09 67.4 41 80.5
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 1.1e-09 67.4 41 80.5
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 3.3e-09 65.9 65 55.4
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 6.1e-08 61.6 39 76.9
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 4.0e-07 58.9 39 74.4


User provided reference genes

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