Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054818.3 Olea europaea HOM05D005173 ORTHO05D006214 2.9e-232 808.1 397 100.0
Sopen07g020470 Solanum pennellii HOM05D005173 ORTHO05D006214 3.7e-150 535.4 353 75.9
Atru.chr7.1658 Acer truncatum HOM05D005173 ORTHO05D006214 8.2e-150 534.3 355 74.6
Solyc07g041200.3 Solanum lycopersicum HOM05D005173 ORTHO05D006214 8.2e-150 534.3 353 75.6
PGSC0003DMG400020952 Solanum tuberosum HOM05D005173 ORTHO05D006214 8.2e-150 534.3 353 75.6
PGR142G0948 Punica granatum HOM05D005173 ORTHO05D006214 1.1e-149 533.9 352 75.9
Cpa.g.sc28.94 Carica papaya HOM05D005173 ORTHO05D006214 2.4e-149 532.7 353 74.5
Migut.L01541 Erythranthe guttata HOM05D005173 ORTHO05D006214 4.1e-149 531.9 352 75.9
CSS0048515 Camellia sinensis var. sinensis HOM05D005173 ORTHO05D006214 9.0e-149 530.8 350 76.0
Gorai.013G226300 Gossypium raimondii HOM05D005173 ORTHO05D006214 1.2e-148 530.4 358 74.9
Dinv25585 Davidia involucrata HOM05D005173 ORTHO05D006214 2.0e-148 529.6 350 75.4
CAN.G88.5 Capsicum annuum HOM05D005173 ORTHO05D006214 4.5e-148 528.5 354 76.0
MSTRG.19482 Avicennia marina HOM05D005173 ORTHO05D006214 5.9e-148 528.1 344 77.0
GSVIVG01015121001 Vitis vinifera HOM05D005173 ORTHO05D006214 1.0e-147 527.3 347 76.7
CANSAT56G2861 Cannabis sativa HOM05D005173 ORTHO05D006214 2.9e-147 525.8 354 73.7
Potri.006G145200 Populus trichocarpa HOM05D005173 ORTHO05D006214 5.0e-147 525.0 352 75.0
Prupe.7G203600 Prunus persica HOM05D005173 ORTHO05D006214 5.0e-147 525.0 350 74.6
Dinv42364 Davidia involucrata HOM05D005173 ORTHO05D006214 8.5e-147 524.2 350 75.4
Lj4g0027115 Lotus japonicus HOM05D005173 ORTHO05D006214 8.5e-147 524.2 350 74.3
RcHm_v2.0_Chr2g0094221 Rosa chinensis HOM05D005173 ORTHO05D006214 1.1e-146 523.9 350 74.9
MD15G1213300 Malus domestica HOM05D005173 ORTHO05D006214 1.4e-146 523.5 350 74.3
Phvul.003G133200 Phaseolus vulgaris HOM05D005173 ORTHO05D006214 1.4e-146 523.5 354 73.2
Glyma.13G107800 Glycine max HOM05D005173 ORTHO05D006214 2.5e-146 522.7 350 74.0
Thecc.09G081500 Theobroma cacao HOM05D005173 ORTHO05D006214 3.2e-146 522.3 350 74.6
Cc00_g19370 Coffea canephora HOM05D005173 ORTHO05D006214 4.2e-146 521.9 374 70.9
MELO3C015504.2 Cucumis melo HOM05D005173 ORTHO05D006214 5.5e-146 521.5 354 73.7
Lalb_Chr07g0181031 Lupinus albus HOM05D005173 ORTHO05D006214 5.5e-146 521.5 347 74.6
ClCG03G015280 Citrullus lanatus HOM05D005173 ORTHO05D006214 7.2e-146 521.2 350 74.0
Ciclev10008959m.g Citrus clementina HOM05D005173 ORTHO05D006214 7.2e-146 521.2 347 75.2
Glyma.17G051500 Glycine max HOM05D005173 ORTHO05D006214 1.2e-145 520.4 350 73.7
CsaV3_1G040770 Cucumis sativus L. HOM05D005173 ORTHO05D006214 1.6e-145 520.0 346 74.6
Manes.03G037700 Manihot esculenta HOM05D005173 ORTHO05D006214 1.6e-145 520.0 350 73.4
Nn8g38732 Nelumbo nucifera HOM05D005173 ORTHO05D006214 1.6e-145 520.0 354 74.0
Eucgr.C00843 Eucalyptus grandis HOM05D005173 ORTHO05D006214 2.7e-145 519.2 354 72.6
Potri.018G064800 Populus trichocarpa HOM05D005173 ORTHO05D006214 4.6e-145 518.5 360 72.2
Sc18g0002360 Simmondsia chinensis HOM05D005173 ORTHO05D006214 4.6e-145 518.5 350 72.3
TWI32G0591 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 4.6e-145 518.5 347 72.9
Gohir.A13G192200 Gossypium hirsutum HOM05D005173 ORTHO05D006214 6.1e-145 518.1 346 74.6
FAN23G0270 Fragaria x ananassa HOM05D005173 ORTHO05D006214 7.9e-145 517.7 358 73.2
VMungo1215G2902 Vigna mungo HOM05D005173 ORTHO05D006214 1.0e-144 517.3 351 72.9
CiPaw.03G210500 Carya illinoinensis HOM05D005173 ORTHO05D006214 1.4e-144 516.9 350 74.3
Hma1.2p1_0797F.1_g219350 Hydrangea macrophylla HOM05D005173 ORTHO05D006214 1.8e-144 516.5 350 74.3
Lalb_Chr12g0200011 Lupinus albus HOM05D005173 ORTHO05D006214 2.3e-144 516.2 351 72.1
QL02p061251 Quercus lobata HOM05D005173 ORTHO05D006214 2.3e-144 516.2 350 74.6
Sabra18G0057400 Salix brachista HOM05D005173 ORTHO05D006214 2.3e-144 516.2 373 69.4
TAR636G1303 Trochodendron aralioides HOM05D005173 ORTHO05D006214 2.3e-144 516.2 350 74.0
Gohir.D13G197600 Gossypium hirsutum HOM05D005173 ORTHO05D006214 5.1e-144 515.0 350 74.6
Sed0012764 Sechium edule HOM05D005173 ORTHO05D006214 5.1e-144 515.0 354 72.9
SGA_v2.0_scaffold21G09462 Striga asiatica HOM05D005173 ORTHO05D006214 5.1e-144 515.0 449 62.8
MSTRG.26457 Avicennia marina HOM05D005173 ORTHO05D006214 6.7e-144 514.6 347 74.9
Duzib150G1290 Durio zibethinus HOM05D005173 ORTHO05D006214 6.7e-144 514.6 350 73.4
Actinidia39689 Actinidia chinensis HOM05D005173 ORTHO05D006214 8.8e-144 514.2 354 73.4
COL.COLO4_18139 Corchorus olitorius HOM05D005173 ORTHO05D006214 1.1e-143 513.8 376 70.5
Psat4g016960 Pisum sativum HOM05D005173 ORTHO05D006214 1.1e-143 513.8 350 73.4
FvH4_1g08150 Fragaria vesca HOM05D005173 ORTHO05D006214 2.0e-143 513.1 356 71.9
FAN19G2713 Fragaria x ananassa HOM05D005173 ORTHO05D006214 2.0e-143 513.1 358 72.3
Manes.16G098000 Manihot esculenta HOM05D005173 ORTHO05D006214 2.0e-143 513.1 349 73.6
Medtr4g125660 Medicago truncatula HOM05D005173 ORTHO05D006214 2.0e-143 513.1 354 72.3
arahy.Tifrunner.gnm1.ann1.6AS4TW Arachis hypogaea HOM05D005173 ORTHO05D006214 2.5e-143 512.7 347 74.4
BcaB08g36505 Brassica carinata HOM05D005173 ORTHO05D006214 2.5e-143 512.7 347 72.9
MD02G1086100 Malus domestica HOM05D005173 ORTHO05D006214 2.5e-143 512.7 350 72.6
TWI63G0548 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 3.3e-143 512.3 355 71.5
THA.LOC104799624 Tarenaya hassleriana HOM05D005173 ORTHO05D006214 4.3e-143 511.9 350 73.7
FAN28G2824 Fragaria x ananassa HOM05D005173 ORTHO05D006214 7.4e-143 511.1 358 72.3
Aqoxy7G01101 Aquilegia oxysepala HOM05D005173 ORTHO05D006214 9.7e-143 510.8 347 73.2
Ca_21308_v3 Cicer arietinum L. HOM05D005173 ORTHO05D006214 1.7e-142 510.0 350 72.9
PSO063G3756 Papaver somniferum HOM05D005173 ORTHO05D006214 1.7e-142 510.0 350 71.4
EL10Ac8g19142 Beta vulgaris HOM05D005173 ORTHO05D006214 2.8e-142 509.2 354 70.9
arahy.Tifrunner.gnm1.ann1.9Y0BJI Arachis hypogaea HOM05D005173 ORTHO05D006214 3.7e-142 508.8 347 73.8
FAN26G2726 Fragaria x ananassa HOM05D005173 ORTHO05D006214 3.7e-142 508.8 357 71.1
Lsat_1_v5_gn_5_142000 Lactuca sativa HOM05D005173 ORTHO05D006214 3.7e-142 508.8 350 71.4
PSO421G0551 Papaver somniferum HOM05D005173 ORTHO05D006214 3.7e-142 508.8 347 72.0
Sp6g23940 Schrenkiella parvula HOM05D005173 ORTHO05D006214 8.2e-142 507.7 344 73.0
TAR624G0255 Trochodendron aralioides HOM05D005173 ORTHO05D006214 1.1e-141 507.3 354 71.8
A10p19490 Brassica napus HOM05D005173 ORTHO05D006214 2.4e-141 506.1 363 69.4
BraA10t44025Z Brassica rapa HOM05D005173 ORTHO05D006214 2.4e-141 506.1 359 70.5
FAN26G1854 Fragaria x ananassa HOM05D005173 ORTHO05D006214 2.4e-141 506.1 350 72.0
AL6G32050 Arabidopsis lyrata HOM05D005173 ORTHO05D006214 5.3e-141 505.0 350 71.7
Thhalv10014184m.g Eutrema salsugineum HOM05D005173 ORTHO05D006214 5.3e-141 505.0 347 71.8
Sed0013811 Sechium edule HOM05D005173 ORTHO05D006214 9.1e-141 504.2 347 72.6
MSTRG.10526 Avicennia marina HOM05D005173 ORTHO05D006214 2.0e-140 503.1 357 70.9
CARHR192290 Cardamine hirsuta HOM05D005173 ORTHO05D006214 2.0e-140 503.1 351 71.5
HanXRQChr01g0007561 Helianthus annuus HOM05D005173 ORTHO05D006214 2.6e-140 502.7 351 70.9
A02p06290 Brassica napus HOM05D005173 ORTHO05D006214 7.7e-140 501.1 346 71.4
C09p55690 Brassica napus HOM05D005173 ORTHO05D006214 7.7e-140 501.1 363 68.6
BraA02t05577Z Brassica rapa HOM05D005173 ORTHO05D006214 7.7e-140 501.1 346 71.4
AT5G20520 Arabidopsis thaliana HOM05D005173 ORTHO05D006214 1.0e-139 500.7 350 71.1
BolC2t07046H Brassica oleracea HOM05D005173 ORTHO05D006214 1.0e-139 500.7 346 71.7
Nitab4.5_0013150g0020 Nicotiana tabacum HOM05D005173 ORTHO05D006214 1.0e-139 500.7 353 72.8
BcaC04g19437 Brassica carinata HOM05D005173 ORTHO05D006214 2.2e-139 499.6 347 71.2
Carub.0006s1885 Capsella rubella HOM05D005173 ORTHO05D006214 2.2e-139 499.6 347 71.8
Nitab4.5_0001488g0160 Nicotiana tabacum HOM05D005173 ORTHO05D006214 3.8e-139 498.8 353 72.8
SalBow1G6961 Salvia bowleyana HOM05D005173 ORTHO05D006214 5.0e-139 498.4 376 69.7
HanXRQChr09g0237971 Helianthus annuus HOM05D005173 ORTHO05D006214 1.4e-138 496.9 352 69.3
BolC9t58435H Brassica oleracea HOM05D005173 ORTHO05D006214 2.5e-138 496.1 347 70.9
vmacro17173 Vaccinium macrocarpon HOM05D005173 ORTHO05D006214 2.5e-138 496.1 414 62.6
DCAR_024724 Daucus carota HOM05D005173 ORTHO05D006214 7.2e-138 494.6 348 70.1
BcaB05g22843 Brassica carinata HOM05D005173 ORTHO05D006214 9.4e-138 494.2 346 71.4
ECA234G3859 Erigeron canadensis HOM05D005173 ORTHO05D006214 6.1e-137 491.5 347 69.5
CDE04G2820 Ceratophyllum demersum HOM05D005173 ORTHO05D006214 3.9e-136 488.8 344 70.9
Haze_25966 Corylus avellana HOM05D005173 ORTHO05D006214 8.8e-136 487.6 413 62.5
Lsat_1_v5_gn_7_34821 Lactuca sativa HOM05D005173 ORTHO05D006214 9.7e-135 484.2 346 70.8
Duzib168G0179 Durio zibethinus HOM05D005173 ORTHO05D006214 6.3e-134 481.5 350 69.1
Lj7C682G9 Lonicera japonica HOM05D005173 ORTHO05D006214 8.2e-134 481.1 347 70.9
Peaxi162Scf00246g00045 Petunia axillaris HOM05D005173 ORTHO05D006214 2.9e-131 472.6 337 71.5
Sabra06G0114800 Salix brachista HOM05D005173 ORTHO05D006214 2.9e-131 472.6 373 65.1
AUR62029004 Chenopodium quinoa HOM05D005173 ORTHO05D006214 3.8e-131 472.2 355 67.3
Ah.14g085040 Amaranthus hybridus HOM05D005173 ORTHO05D006214 6.5e-131 471.5 354 67.2
AUR62025172 Chenopodium quinoa HOM05D005173 ORTHO05D006214 1.6e-129 466.8 355 66.5
Zm00001eb108940 Zea mays HOM05D005173 ORTHO05D006214 3.0e-128 462.6 345 64.9
Os07g0608300 Oryza sativa ssp. japonica HOM05D005173 ORTHO05D006214 1.1e-127 460.7 349 63.9
Aa31LG1G14140 Aethionema arabicum HOM05D005173 ORTHO05D006214 3.7e-126 455.7 357 65.3
DCAR_028284 Daucus carota HOM05D005173 ORTHO05D006214 1.8e-125 453.4 368 62.2
unitig_22.g5750 Utricularia gibba HOM05D005173 ORTHO05D006214 2.4e-125 453.0 353 65.7
HPP92_006149 Vanilla planifolia HOM05D005173 ORTHO05D006214 1.1e-122 444.1 346 63.0
SHI33752 Sapria himalayana HOM05D005173 ORTHO05D006214 3.6e-121 439.1 331 65.9
Rhsim05G0012900 Rhododendron simsii HOM05D005173 ORTHO05D006214 7.0e-117 424.9 378 60.3
Mapoly0002s0260 Marchantia polymorpha HOM05D005173 ORTHO05D006214 1.2e-113 414.1 342 60.8
SMO203G0271 Selaginella moellendorffii HOM05D005173 ORTHO05D006214 1.4e-109 400.6 344 59.0
DCAR_031940 Daucus carota HOM05D005173 ORTHO05D006214 3.8e-107 392.5 348 58.0
BcaC03g13770 Brassica carinata HOM05D005173 ORTHO05D006214 6.8e-104 381.7 341 60.1
BcaB05g22835 Brassica carinata HOM05D005173 ORTHO05D006214 1.3e-99 367.5 268 68.3
ATR0598G148 Amborella trichopoda HOM05D005173 ORTHO05D006214 1.1e-98 364.4 279 66.3
Pp3c15_14310 Physcomitrium patens HOM05D005173 ORTHO05D006214 1.7e-94 350.5 343 53.9
Actinidia25222 Actinidia chinensis HOM05D005173 ORTHO05D006214 1.5e-90 337.4 263 66.2
CBR_g3819 Chara braunii HOM05D005173 ORTHO05D006214 4.4e-87 325.9 342 51.2
QL02p061362 Quercus lobata HOM05D005173 ORTHO05D006214 9.2e-85 318.2 238 68.1
TPR.G9429 Trifolium pratense HOM05D005173 ORTHO05D006214 1.1e-80 304.7 176 83.0
HPP92_009230 Vanilla planifolia HOM05D005173 ORTHO05D006214 7.1e-77 292.0 175 80.0
Rhsim03G0230600 Rhododendron simsii HOM05D005173 ORTHO05D006214 1.1e-66 258.1 255 53.7
TPR.G23232 Trifolium pratense HOM05D005173 ORTHO05D006214 3.4e-55 219.9 126 80.2
HPP92_009231 Vanilla planifolia HOM05D005173 ORTHO05D006214 3.4e-55 219.9 134 73.1
Cre03.g160100 Chlamydomonas reinhardtii HOM05D005173 ORTHO05D006214 1.9e-50 204.1 346 36.1
BNapus_Darmor_BZH_scaffold_38p01550 Brassica napus HOM05D005173 ORTHO05D006214 3.2e-45 186.8 103 85.4
Cfa026742 Carpinus fangiana HOM05D005173 ORTHO05D006214 1.7e-30 137.9 349 30.9
SGA_v2.0_scaffold23G10070 Striga asiatica HOM05D005173 ORTHO05D006214 2.5e-29 134.0 118 60.2
PRCOL_00002900 Prasinoderma coloniale HOM05D005173 ORTHO05D006214 1.2e-23 115.2 349 27.8
ClCG07G005020 Citrullus lanatus HOM05D005173 ORTHO05D006214 4.5e-23 113.2 77 74.0
Cfa023090 Carpinus fangiana HOM05D005173 ORTHO05D126580 1.3e-17 95.1 329 24.9
CSS0040146 Camellia sinensis var. sinensis HOM05D005173 ORTHO05D006214 1.7e-17 94.7 54 74.1
Hma1.2p1_0440F.1_g153610 Hydrangea macrophylla HOM05D005173 ORTHO05D006214 1.7e-17 94.7 78 59.0
Lsat_1_v5_gn_2_31840 Lactuca sativa HOM05D005173 ORTHO05D006214 3.8e-14 83.6 57 68.4
Lsat_1_v5_gn_5_98841 Lactuca sativa HOM05D005173 ORTHO05D006214 1.2e-12 78.6 80 51.2
MCO15G111 Micromonas commoda HOM05D005173 ORTHO05D006214 2.6e-10 70.9 154 31.8
Hma1.2p1_0536F.1_g174110 Hydrangea macrophylla HOM05D005096 ORTHO05D006214 4.4e-10 70.1 46 69.6
SEGI_17932 Sequoiadendron giganteum HOM05D005173 ORTHO05D006214 7.0e-08 62.8 38 76.3
Nn2g12540 Nelumbo nucifera HOM05D005173 ORTHO05D006214 2.6e-07 60.8 43 58.1
THA.LOC104823854 Tarenaya hassleriana HOM05D000464 ORTHO05D000408 3.8e-06 57.0 103 30.1
Haze_27227 Corylus avellana HOM05D000464 ORTHO05D000408 8.5e-06 55.8 80 32.5


User provided reference genes

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