Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu054718.1 Olea europaea HOM05D002824 ORTHO05D008771 3.0e-40 167.9 78 100.0
HanXRQChr00c0394g0574551 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
HanXRQChr00c0593g0576361 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
HanXRQChr00c0925g0577891 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
HanXRQChr01g0020221 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
HanXRQChr04g0127491 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
HanXRQChr05g0152571 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
HanXRQChr10g0284381 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
HanXRQChr10g0318061 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
HanXRQChr11g0321091 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
HanXRQChr11g0326961 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
HanXRQChr12g0369851 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
HanXRQChr15g0486561 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
HanXRQCPg0580181 Helianthus annuus HOM05D002824 ORTHO05D008771 1.2e-31 139.4 78 88.5
DCAR_032520 Daucus carota HOM05D002824 ORTHO05D008771 3.4e-31 137.9 78 85.9
PSO548G0003 Papaver somniferum HOM05D002824 ORTHO05D008771 1.3e-30 136.0 78 85.9
Sc25g0002050 Simmondsia chinensis HOM05D000964 ORTHO05D001488 1.1e-29 132.9 78 84.6
Hma1.2p1_0818F.1_g223320 Hydrangea macrophylla HOM05D002824 ORTHO05D008771 1.4e-29 132.5 72 90.3
Ah.10g027210 Amaranthus hybridus HOM05D000964 ORTHO05D001488 4.1e-29 131.0 78 84.6
Ah.10g027340 Amaranthus hybridus HOM05D000964 ORTHO05D001488 4.1e-29 131.0 78 84.6
Ah.10g027460 Amaranthus hybridus HOM05D000964 ORTHO05D001488 4.1e-29 131.0 78 84.6
EL10Ac5g11668 Beta vulgaris HOM05D002824 ORTHO05D008771 4.1e-29 131.0 78 84.6
PGR042G2139 Punica granatum HOM05D002824 ORTHO05D008771 4.1e-29 131.0 78 79.5
Ah.10g028980 Amaranthus hybridus HOM05D000964 ORTHO05D001488 3.5e-28 127.9 78 83.3
Eucgr.G00343 Eucalyptus grandis HOM05D002824 ORTHO05D008771 5.9e-28 127.1 78 75.6
Sc16g0004450 Simmondsia chinensis HOM05D002824 ORTHO05D008771 2.9e-27 124.8 78 80.8
Lj3g0012155 Lotus japonicus HOM05D002824 ORTHO05D008771 1.1e-26 122.9 70 80.0
Lalb_Chr01g0006541 Lupinus albus HOM05D002824 ORTHO05D008771 3.2e-26 121.3 70 78.6
Aqoxy7G01548 Aquilegia oxysepala HOM05D002824 ORTHO05D008771 4.2e-26 120.9 72 75.0
TPR.G40092 Trifolium pratense HOM05D002824 ORTHO05D008771 4.2e-26 120.9 70 77.1
Phvul.003G183400 Phaseolus vulgaris HOM05D002824 ORTHO05D008771 7.2e-26 120.2 70 75.7
Potri.018G038900 Populus trichocarpa HOM05D002824 ORTHO05D008771 7.2e-26 120.2 72 73.6
VMungo1215G1991 Vigna mungo HOM05D002824 ORTHO05D008771 7.2e-26 120.2 70 75.7
arahy.Tifrunner.gnm1.ann1.RFE8PP Arachis hypogaea HOM05D002824 ORTHO05D008771 9.4e-26 119.8 70 77.1
Manes.07G025200 Manihot esculenta HOM05D002824 ORTHO05D008771 9.4e-26 119.8 72 72.2
Manes.10G116800 Manihot esculenta HOM05D002824 ORTHO05D008771 9.4e-26 119.8 72 72.2
Glyma.17G080200 Glycine max HOM05D002824 ORTHO05D008771 1.6e-25 119.0 70 74.3
Medtr8g061130 Medicago truncatula HOM05D002824 ORTHO05D008771 1.6e-25 119.0 70 74.3
Ciclev10022760m.g Citrus clementina HOM05D002824 ORTHO05D008771 2.1e-25 118.6 75 72.0
ClCG11G018100 Citrullus lanatus HOM05D002824 ORTHO05D008771 3.6e-25 117.9 70 74.3
Potri.006G241100 Populus trichocarpa HOM05D002824 ORTHO05D008771 4.7e-25 117.5 72 72.2
Psat4g172920 Pisum sativum HOM05D002824 ORTHO05D008771 6.1e-25 117.1 70 74.3
Sed0016999 Sechium edule HOM05D002824 ORTHO05D008771 1.8e-24 115.5 72 73.6
Glyma.05G019600 Glycine max HOM05D002824 ORTHO05D008771 4.0e-24 114.4 70 71.4
Sabra06G0188500 Salix brachista HOM05D002824 ORTHO05D008771 4.0e-24 114.4 72 70.8
Nitab4.5_0000676g0190 Nicotiana tabacum HOM05D002824 ORTHO05D008771 6.8e-24 113.6 70 74.3
Nitab4.5_0005206g0060 Nicotiana tabacum HOM05D002824 ORTHO05D008771 6.8e-24 113.6 70 74.3
Peaxi162Scf00652g00418 Petunia axillaris HOM05D002824 ORTHO05D008771 6.8e-24 113.6 70 74.3
MELO3C016702.2 Cucumis melo HOM05D002824 ORTHO05D008771 1.2e-23 112.8 70 72.9
Atru.chr9.2077 Acer truncatum HOM05D002824 ORTHO05D008771 2.0e-23 112.1 69 69.6
QL08p021656 Quercus lobata HOM05D002824 ORTHO05D008771 2.0e-23 112.1 70 72.9
Solyc12g098350.1 Solanum lycopersicum HOM05D002824 ORTHO05D008771 2.0e-23 112.1 70 72.9
Sopen12g033130 Solanum pennellii HOM05D002824 ORTHO05D008771 2.0e-23 112.1 70 72.9
PGSC0003DMG400007705 Solanum tuberosum HOM05D002824 ORTHO05D008771 2.0e-23 112.1 70 72.9
Atru.chr1.2540 Acer truncatum HOM05D002824 ORTHO05D008771 2.6e-23 111.7 69 68.1
Thecc.03G290100 Theobroma cacao HOM05D002824 ORTHO05D008771 2.6e-23 111.7 72 68.1
CiPaw.11G169000 Carya illinoinensis HOM05D002824 ORTHO05D008771 3.4e-23 111.3 71 70.4
Gohir.A12G232300 Gossypium hirsutum HOM05D002824 ORTHO05D008771 3.4e-23 111.3 72 68.1
Gohir.D12G235100 Gossypium hirsutum HOM05D002824 ORTHO05D008771 3.4e-23 111.3 72 68.1
Gorai.008G251300 Gossypium raimondii HOM05D002824 ORTHO05D008771 3.4e-23 111.3 72 68.1
CsaV3_4G033730 Cucumis sativus L. HOM05D002824 ORTHO05D008771 4.4e-23 110.9 70 70.0
Duzib084G0020 Durio zibethinus HOM05D002824 ORTHO05D008771 4.4e-23 110.9 72 66.7
Duzib205G1549 Durio zibethinus HOM05D002824 ORTHO05D008771 7.5e-23 110.2 72 66.7
FAN11G2965 Fragaria x ananassa HOM05D002824 ORTHO05D008771 7.5e-23 110.2 72 70.8
FAN21G0827 Fragaria x ananassa HOM05D002824 ORTHO05D008771 7.5e-23 110.2 72 70.8
HanXRQChr02g0052601 Helianthus annuus HOM05D002824 ORTHO05D008771 9.8e-23 109.8 59 89.8
CAN.G767.42 Capsicum annuum HOM05D002824 ORTHO05D008771 1.7e-22 109.0 70 70.0
Prupe.4G182300 Prunus persica HOM05D002824 ORTHO05D008771 2.8e-22 108.2 74 64.9
COL.COLO4_21755 Corchorus olitorius HOM05D002824 ORTHO05D008771 3.7e-22 107.8 72 65.3
Lsat_1_v5_gn_0_41600 Lactuca sativa HOM05D000964 ORTHO05D004047 7.0e-21 103.6 62 83.9
Lsat_1_v5_gn_2_92080 Lactuca sativa HOM05D000964 ORTHO05D004047 7.0e-21 103.6 62 83.9
Lsat_1_v5_gn_3_81720 Lactuca sativa HOM05D000964 ORTHO05D003870 7.0e-21 103.6 62 83.9
Lsat_1_v5_gn_6_69061 Lactuca sativa HOM05D000964 ORTHO05D004047 7.0e-21 103.6 62 83.9
Lsat_1_v5_gn_8_146180 Lactuca sativa HOM05D000964 ORTHO05D003870 7.0e-21 103.6 62 83.9
Lsat_1_v5_gn_2_136980 Lactuca sativa HOM05D002824 ORTHO05D008771 2.0e-20 102.1 68 69.1
Cpa.g.sc321.5 Carica papaya HOM05D002824 ORTHO05D008771 3.5e-20 101.3 71 69.0
MD11G1244000 Malus domestica HOM05D002824 ORTHO05D008771 5.9e-20 100.5 72 63.9
Lsat_1_v5_gn_5_50421 Lactuca sativa HOM05D000964 ORTHO05D003870 2.3e-19 98.6 62 80.6
Medtr0002s0770 Medicago truncatula HOM05D002824 ORTHO05D008771 5.0e-19 97.4 68 69.1
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 4.2e-18 94.4 77 61.0
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.2e-18 94.4 77 61.0
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 5.5e-18 94.0 76 67.1
Prupe.4G182400 Prunus persica HOM05D002824 ORTHO05D008771 1.6e-17 92.4 74 56.8
Sc20g0004270 Simmondsia chinensis HOM05D000964 ORTHO05D001488 1.6e-17 92.4 64 71.9
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.6e-17 91.3 76 59.2
Aa31LG9G11000 Aethionema arabicum HOM05D002824 ORTHO05D008771 4.7e-17 90.9 71 59.2
AL6G45360 Arabidopsis lyrata HOM05D002824 ORTHO05D008771 4.7e-17 90.9 70 60.0
AT4G11175 Arabidopsis thaliana HOM05D002824 ORTHO05D008771 4.7e-17 90.9 70 60.0
BcaB01g01596 Brassica carinata HOM05D002824 ORTHO05D008771 4.7e-17 90.9 70 60.0
Carub.0006s3001 Capsella rubella HOM05D002824 ORTHO05D008771 4.7e-17 90.9 70 60.0
CARHR255400 Cardamine hirsuta HOM05D002824 ORTHO05D008771 4.7e-17 90.9 70 60.0
Sp6g06240 Schrenkiella parvula HOM05D002824 ORTHO05D008771 4.7e-17 90.9 70 60.0
BcaB05g23855 Brassica carinata HOM05D002824 ORTHO05D008771 6.1e-17 90.5 70 58.6
A09p28030 Brassica napus HOM05D002824 ORTHO05D008771 6.1e-17 90.5 70 58.6
BraA09t38371Z Brassica rapa HOM05D002824 ORTHO05D008771 6.1e-17 90.5 70 58.6
BcaC04g21113 Brassica carinata HOM05D002824 ORTHO05D008771 8.0e-17 90.1 70 57.1
C09p35540 Brassica napus HOM05D002824 ORTHO05D008771 8.0e-17 90.1 70 57.1
BolC9t56393H Brassica oleracea HOM05D002824 ORTHO05D008771 8.0e-17 90.1 70 57.1
Thhalv10029051m.g Eutrema salsugineum HOM05D002824 ORTHO05D008771 1.4e-16 89.4 70 58.6
Ca_24278_v3 Cicer arietinum L. HOM05D002824 ORTHO05D008771 4.0e-16 87.8 53 71.7
Cc09_g05310 Coffea canephora HOM05D002824 ORTHO05D008771 6.8e-16 87.0 76 55.3
PSO782G5188 Papaver somniferum HOM05D002824 ORTHO05D008771 6.8e-16 87.0 78 59.0
Sc20g0003000 Simmondsia chinensis HOM05D002824 ORTHO05D008771 6.8e-16 87.0 56 78.6
THA.LOC104814832 Tarenaya hassleriana HOM05D002824 ORTHO05D008771 1.2e-15 86.3 70 60.0
Hund26844 Selenicereus undatus HOM05D000964 ORTHO05D001488 3.4e-15 84.7 63 65.1
FAN16G1250 Fragaria x ananassa HOM05D002824 ORTHO05D008771 5.7e-15 84.0 74 56.8
FAN25G0310 Fragaria x ananassa HOM05D002824 ORTHO05D008771 5.7e-15 84.0 74 56.8
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.7e-15 84.0 63 65.1
FvH4_3g20270 Fragaria vesca HOM05D002824 ORTHO05D008771 9.8e-15 83.2 60 65.0
MELO3C027648.2 Cucumis melo HOM05D002824 ORTHO05D008771 2.2e-14 82.0 80 65.0
RcHm_v2.0_Chr5g0034161 Rosa chinensis HOM05D002824 ORTHO05D008771 2.2e-14 82.0 55 69.1
SMO358G0035 Selaginella moellendorffii HOM05D002824 ORTHO05D008771 4.1e-13 77.8 63 60.3
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.7e-12 75.1 55 67.3
FAN10G1907 Fragaria x ananassa HOM05D002824 ORTHO05D005776 7.8e-12 73.6 80 52.5
RcHm_v2.0_CPg0501881 Rosa chinensis HOM05D002824 ORTHO05D008771 3.9e-11 71.2 55 61.8
FAN22G0293 Fragaria x ananassa HOM05D002824 ORTHO05D008771 6.6e-11 70.5 80 51.2
ClCG00G003150 Citrullus lanatus HOM05D002824 ORTHO05D008771 8.6e-11 70.1 85 51.8
MELO3C032365.2 Cucumis melo HOM05D002824 ORTHO05D008771 8.6e-11 70.1 80 57.5
MBI15_g40528_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D008771 7.3e-10 67.0 38 81.6
vmacro22400 Vaccinium macrocarpon HOM05D000964 ORTHO05D001488 1.6e-09 65.9 58 58.6
vmacro22425 Vaccinium macrocarpon HOM05D000964 ORTHO05D001488 1.6e-09 65.9 58 58.6
MELO3C033566.2 Cucumis melo HOM05D002824 ORTHO05D008771 4.7e-09 64.3 80 53.8
Nitab4.5_0006114g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009867 4.7e-09 64.3 45 73.3
Ca_29478_v3 Cicer arietinum L. HOM05D002824 ORTHO05D008771 1.4e-08 62.8 70 37.1
Nitab4.5_0000173g0110 Nicotiana tabacum HOM05D002824 ORTHO05D007162 8.9e-08 60.1 40 75.0
ClCG11G017170 Citrullus lanatus HOM05D002824 ORTHO05D008771 1.2e-07 59.7 39 79.5
Nn002s41361 Nelumbo nucifera HOM05D002824 ORTHO05D008771 2.6e-07 58.5 35 80.0
Nn021s41523 Nelumbo nucifera HOM05D002824 ORTHO05D008771 2.6e-07 58.5 35 80.0
Nn070s42371 Nelumbo nucifera HOM05D002824 ORTHO05D008771 2.6e-07 58.5 35 80.0
MELO3C027952.2 Cucumis melo HOM05D002824 ORTHO05D008771 3.4e-07 58.2 61 62.3
Cre04.g218700 Chlamydomonas reinhardtii HOM05D002824 ORTHO05D008771 5.8e-07 57.4 68 39.7
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 1.3e-06 56.2 44 68.2
PRCOL_00002279 Prasinoderma coloniale HOM05D002824 ORTHO05D008771 3.7e-06 54.7 60 36.7
EL10Ac5g11781 Beta vulgaris HOM05D002824 ORTHO05D008771 4.9e-06 54.3 35 80.0


User provided reference genes

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