Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu053268.1 Olea europaea HOM05D001251 ORTHO05D004135 8.6e-34 146.4 71 100.0
MSTRG.4794 Avicennia marina HOM05D001251 ORTHO05D004135 3.4e-22 107.8 71 70.4
Oeu064410.3 Olea europaea HOM05D001251 ORTHO05D004135 5.4e-20 100.5 59 84.7
Duzib138G1188 Durio zibethinus HOM05D001251 ORTHO05D004135 3.6e-16 87.8 72 69.4
FAN10G4260 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.8e-15 85.5 64 67.2
FAN10G0258 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.1e-15 84.7 64 67.2
Gohir.D12G121000 Gossypium hirsutum HOM05D001251 ORTHO05D004135 4.0e-15 84.3 63 69.8
Haze_15754 Corylus avellana HOM05D001251 ORTHO05D004135 5.2e-15 84.0 62 71.0
Gohir.D12G121100 Gossypium hirsutum HOM05D001251 ORTHO05D004135 6.8e-15 83.6 70 67.1
Gorai.008G132000 Gossypium raimondii HOM05D001251 ORTHO05D004135 6.8e-15 83.6 70 67.1
QL08p047700 Quercus lobata HOM05D001251 ORTHO05D004135 8.9e-15 83.2 60 73.3
COL.COLO4_23060 Corchorus olitorius HOM05D001251 ORTHO05D004135 1.2e-14 82.8 75 62.7
Gohir.A12G117400 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.2e-14 82.8 62 69.4
Gorai.008G131800 Gossypium raimondii HOM05D001251 ORTHO05D004135 1.2e-14 82.8 62 69.4
Sabra14G0079000 Salix brachista HOM05D001251 ORTHO05D004135 1.2e-14 82.8 60 73.3
FvH4_7g17850 Fragaria vesca HOM05D001251 ORTHO05D004135 1.5e-14 82.4 64 67.2
FAN01G1785 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.5e-14 82.4 64 67.2
FAN03G0514 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.5e-14 82.4 64 67.2
Cfa003724 Carpinus fangiana HOM05D001251 ORTHO05D004135 2.0e-14 82.0 62 71.0
Duzib133G0065 Durio zibethinus HOM05D001251 ORTHO05D004135 3.4e-14 81.3 73 64.4
Dinv34262 Davidia involucrata HOM05D001251 ORTHO05D004135 4.4e-14 80.9 73 61.6
FAN24G2965 Fragaria x ananassa HOM05D001251 ORTHO05D004135 4.4e-14 80.9 63 63.5
PSO782G0772 Papaver somniferum HOM05D001251 ORTHO05D004135 4.4e-14 80.9 71 62.0
Thecc.01G332000 Theobroma cacao HOM05D001251 ORTHO05D004135 4.4e-14 80.9 59 74.6
VMungo1309G2431 Vigna mungo HOM05D001251 ORTHO05D004135 4.4e-14 80.9 62 71.0
FAN01G0834 Fragaria x ananassa HOM05D001251 ORTHO05D004135 5.8e-14 80.5 64 67.2
FAN06G3608 Fragaria x ananassa HOM05D001251 ORTHO05D004135 5.8e-14 80.5 62 67.7
Hma1.2p1_0074F.1_g038840 Hydrangea macrophylla HOM05D001251 ORTHO05D004135 5.8e-14 80.5 61 72.1
SGA_v2.0_scaffold232G43523 Striga asiatica HOM05D001251 ORTHO05D004135 7.5e-14 80.1 70 60.0
SalBow5G5002 Salvia bowleyana HOM05D001251 ORTHO05D004135 1.3e-13 79.3 65 64.6
TWI14G1269 Tripterygium wilfordii HOM05D001251 ORTHO05D004135 1.3e-13 79.3 62 67.7
Potri.014G106800 Populus trichocarpa HOM05D001251 ORTHO05D004135 1.7e-13 79.0 60 70.0
arahy.Tifrunner.gnm1.ann1.0U0SSW Arachis hypogaea HOM05D001251 ORTHO05D004135 2.2e-13 78.6 62 69.4
arahy.Tifrunner.gnm1.ann1.J7VJ5I Arachis hypogaea HOM05D001251 ORTHO05D004135 2.2e-13 78.6 62 69.4
FAN02G3085 Fragaria x ananassa HOM05D001251 ORTHO05D004135 2.2e-13 78.6 64 64.1
FAN03G1652 Fragaria x ananassa HOM05D001251 ORTHO05D004135 2.2e-13 78.6 64 64.1
Gohir.A12G117500 Gossypium hirsutum HOM05D001251 ORTHO05D004135 2.2e-13 78.6 70 64.3
FAN06G1969 Fragaria x ananassa HOM05D001251 ORTHO05D004135 2.9e-13 78.2 60 66.7
FAN17G2333 Fragaria x ananassa HOM05D001251 ORTHO05D004135 2.9e-13 78.2 63 63.5
PSO063G2933 Papaver somniferum HOM05D001251 ORTHO05D004135 3.7e-13 77.8 71 60.6
Prupe.2G200400 Prunus persica HOM05D001251 ORTHO05D004135 3.7e-13 77.8 72 58.3
RcHm_v2.0_Chr1g0361301 Rosa chinensis HOM05D001251 ORTHO05D004135 3.7e-13 77.8 64 65.6
arahy.Tifrunner.gnm1.ann1.P5534Y Arachis hypogaea HOM05D001251 ORTHO05D004135 4.9e-13 77.4 63 66.7
Atru.chr5.788 Acer truncatum HOM05D001251 ORTHO05D004135 6.4e-13 77.0 70 62.9
Cpa.g.sc57.78 Carica papaya HOM05D001251 ORTHO05D004135 6.4e-13 77.0 62 66.1
Gorai.007G113900 Gossypium raimondii HOM05D001251 ORTHO05D004135 8.3e-13 76.6 73 61.6
Nn1g00457 Nelumbo nucifera HOM05D001251 ORTHO05D004135 1.1e-12 76.3 63 66.7
Migut.N01518 Erythranthe guttata HOM05D001251 ORTHO05D004135 1.4e-12 75.9 69 59.4
Gohir.D11G106400 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.4e-12 75.9 60 68.3
Gohir.A11G101800 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.9e-12 75.5 73 60.3
Manes.05G015600 Manihot esculenta HOM05D001251 ORTHO05D004135 1.9e-12 75.5 57 68.4
Hma1.2p1_2492F.1_g323260 Hydrangea macrophylla HOM05D001251 ORTHO05D004135 2.4e-12 75.1 73 60.3
Phvul.009G259400 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 2.4e-12 75.1 61 67.2
Phvul.009G259650 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 3.2e-12 74.7 60 68.3
TAR374G0209 Trochodendron aralioides HOM05D001251 ORTHO05D004135 3.2e-12 74.7 71 62.0
arahy.Tifrunner.gnm1.ann1.GF54Z4 Arachis hypogaea HOM05D001251 ORTHO05D004135 4.1e-12 74.3 63 65.1
Eucgr.D02651 Eucalyptus grandis HOM05D001251 ORTHO05D004135 5.4e-12 73.9 58 65.5
Glyma.03G261800 Glycine max HOM05D001251 ORTHO05D004135 5.4e-12 73.9 62 66.1
Potri.002G180800 Populus trichocarpa HOM05D001251 ORTHO05D004135 5.4e-12 73.9 60 66.7
Glyma.07G048500 Glycine max HOM05D001251 ORTHO05D004135 7.1e-12 73.6 72 59.7
PGR031G0915 Punica granatum HOM05D001251 ORTHO05D004135 7.1e-12 73.6 60 65.0
HanXRQChr09g0264401 Helianthus annuus HOM05D001251 ORTHO05D004135 9.2e-12 73.2 65 60.0
HanXRQChr15g0489581 Helianthus annuus HOM05D001251 ORTHO05D004135 9.2e-12 73.2 63 61.9
Dinv32652 Davidia involucrata HOM05D001251 ORTHO05D004135 1.2e-11 72.8 79 58.2
Solyc10g005080.3 Solanum lycopersicum HOM05D001251 ORTHO05D004135 1.2e-11 72.8 75 58.7
TWI23G1207 Tripterygium wilfordii HOM05D001251 ORTHO05D004135 1.2e-11 72.8 62 62.9
Ca_09556_v3 Cicer arietinum L. HOM05D001251 ORTHO05D004135 1.6e-11 72.4 66 60.6
Glyma.19G260900 Glycine max HOM05D001251 ORTHO05D004135 1.6e-11 72.4 62 66.1
Medtr7g118330 Medicago truncatula HOM05D001251 ORTHO05D004135 1.6e-11 72.4 69 58.0
Sopen10g001100 Solanum pennellii HOM05D001251 ORTHO05D004135 1.6e-11 72.4 74 59.5
Ciclev10018964m.g Citrus clementina HOM05D001251 ORTHO05D004135 2.1e-11 72.0 67 59.7
TPR.G4678 Trifolium pratense HOM05D001251 ORTHO05D004135 2.7e-11 71.6 66 59.1
Cc02_g39990 Coffea canephora HOM05D001251 ORTHO05D004135 3.5e-11 71.2 71 62.0
MD01G1090900 Malus domestica HOM05D001251 ORTHO05D004135 3.5e-11 71.2 59 64.4
CiPaw.01G085700 Carya illinoinensis HOM05D001251 ORTHO05D004135 4.6e-11 70.9 62 61.3
DCAR_006991 Daucus carota HOM05D001251 ORTHO05D004135 4.6e-11 70.9 73 57.5
VMungo0331G1277 Vigna mungo HOM05D001251 ORTHO05D004135 4.6e-11 70.9 57 66.7
Lalb_Chr15g0076591 Lupinus albus HOM05D001251 ORTHO05D004135 6.0e-11 70.5 58 62.1
unitig_45.g31541 Utricularia gibba HOM05D001251 ORTHO05D004135 6.0e-11 70.5 65 55.4
vmacro12634 Vaccinium macrocarpon HOM05D001251 ORTHO05D004135 6.0e-11 70.5 72 61.1
Glyma.16G017400 Glycine max HOM05D001251 ORTHO05D004135 1.0e-10 69.7 72 56.9
Psat3g000720 Pisum sativum HOM05D001251 ORTHO05D004135 1.0e-10 69.7 66 57.6
Nitab4.5_0007792g0010 Nicotiana tabacum HOM05D001251 ORTHO05D004135 1.3e-10 69.3 74 56.8
Lalb_Chr18g0044761 Lupinus albus HOM05D001251 ORTHO05D004135 1.7e-10 68.9 58 62.1
Peaxi162Scf00092g01519 Petunia axillaris HOM05D001251 ORTHO05D004135 3.0e-10 68.2 75 54.7
Lalb_Chr10g0100921 Lupinus albus HOM05D001251 ORTHO05D004135 3.9e-10 67.8 58 63.8
CSS0039199 Camellia sinensis var. sinensis HOM05D001251 ORTHO05D004135 6.6e-10 67.0 57 64.9
CiPaw.02G045300 Carya illinoinensis HOM05D001251 ORTHO05D004135 6.6e-10 67.0 70 55.7
unitig_8.g4997 Utricularia gibba HOM05D001251 ORTHO05D004135 8.6e-10 66.6 64 59.4
Nitab4.5_0005359g0030 Nicotiana tabacum HOM05D001251 ORTHO05D004135 1.1e-09 66.2 73 53.4
Phvul.010G120401 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 1.1e-09 66.2 57 63.2
Lj3g0020484 Lotus japonicus HOM05D001251 ORTHO05D004135 1.5e-09 65.9 60 61.7
MBI04_g18999_MAGBIO Magnolia biondii HOM05D001251 ORTHO05D004135 1.5e-09 65.9 68 52.9
HanXRQChr15g0489571 Helianthus annuus HOM05D001251 ORTHO05D004135 1.9e-09 65.5 59 59.3
CAN.G1150.2 Capsicum annuum HOM05D001251 ORTHO05D004135 4.3e-09 64.3 75 54.7
Carub.0001s0116 Capsella rubella HOM05D001251 ORTHO05D004135 7.3e-09 63.5 60 58.3
ECA240G1436 Erigeron canadensis HOM05D001251 ORTHO05D004135 7.3e-09 63.5 66 57.6
Sabra02G0133600 Salix brachista HOM05D001251 ORTHO05D004135 7.3e-09 63.5 60 60.0
AT1G01060 Arabidopsis thaliana HOM05D001251 ORTHO05D004135 2.1e-08 62.0 61 59.0
Lsat_1_v5_gn_3_140720 Lactuca sativa HOM05D001251 ORTHO05D004135 2.8e-08 61.6 64 51.6
THA.LOC104815900 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 3.6e-08 61.2 63 55.6
THA.LOC104827645 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 3.6e-08 61.2 62 54.8
THA.LOC104803067 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 4.7e-08 60.8 62 58.1
A10p00850 Brassica napus HOM05D001251 ORTHO05D004135 6.2e-08 60.5 63 57.1
C05p00880 Brassica napus HOM05D001251 ORTHO05D004135 6.2e-08 60.5 63 57.1
BolC5t28872H Brassica oleracea HOM05D001251 ORTHO05D004135 6.2e-08 60.5 63 57.1
BraA10t42363Z Brassica rapa HOM05D001251 ORTHO05D004135 6.2e-08 60.5 63 57.1
Thhalv10007028m.g Eutrema salsugineum HOM05D001251 ORTHO05D004135 6.2e-08 60.5 61 57.4
Hund16759 Selenicereus undatus HOM05D001251 ORTHO05D004135 6.2e-08 60.5 66 53.0
AUR62022683 Chenopodium quinoa HOM05D001251 ORTHO05D004135 8.1e-08 60.1 63 54.0
TAR629G3201 Trochodendron aralioides HOM05D001251 ORTHO05D004135 8.1e-08 60.1 66 54.5
Ah.05g178860 Amaranthus hybridus HOM05D001251 ORTHO05D004135 1.4e-07 59.3 71 46.5
AL1G11460 Arabidopsis lyrata HOM05D001251 ORTHO05D004135 1.8e-07 58.9 61 57.4
AUR62004570 Chenopodium quinoa HOM05D001251 ORTHO05D004135 1.8e-07 58.9 63 54.0
THA.LOC104825910 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 1.8e-07 58.9 55 60.0
CARHR142180 Cardamine hirsuta HOM05D001251 ORTHO05D004135 2.4e-07 58.5 58 58.6
Sp1g01250 Schrenkiella parvula HOM05D001251 ORTHO05D004135 2.4e-07 58.5 61 55.7
Aa31LG1G10420 Aethionema arabicum HOM05D001251 ORTHO05D004135 3.1e-07 58.2 47 68.1
Manes.01G239000 Manihot esculenta HOM05D001251 ORTHO05D004135 3.1e-07 58.2 49 61.2
FAN15G2528 Fragaria x ananassa HOM05D001251 ORTHO05D004135 4.0e-07 57.8 50 60.0
Actinidia01529 Actinidia chinensis HOM05D001251 ORTHO05D004135 5.2e-07 57.4 45 62.2
EL10Ac1g00171 Beta vulgaris HOM05D001251 ORTHO05D004135 5.2e-07 57.4 70 48.6
CARHR001420 Cardamine hirsuta HOM05D001251 ORTHO05D004135 5.2e-07 57.4 51 60.8
MBI12_g27877_MAGBIO Magnolia biondii HOM05D001251 ORTHO05D004135 5.2e-07 57.4 52 59.6
Sc26g0000440 Simmondsia chinensis HOM05D001251 ORTHO05D004135 6.8e-07 57.0 47 61.7
AT2G46830 Arabidopsis thaliana HOM05D001251 ORTHO05D004135 8.9e-07 56.6 66 53.0
CsaV3_6G008360 Cucumis sativus L. HOM05D001251 ORTHO05D004135 8.9e-07 56.6 73 47.9
Os08g0157600 Oryza sativa ssp. japonica HOM05D001251 ORTHO05D004135 1.5e-06 55.8 51 62.7
Aa31LG1G28200 Aethionema arabicum HOM05D001251 ORTHO05D004135 2.6e-06 55.1 70 51.4
ClCG06G002330 Citrullus lanatus HOM05D001251 ORTHO05D004135 2.6e-06 55.1 72 47.2
MELO3C022302.2 Cucumis melo HOM05D001251 ORTHO05D004135 3.4e-06 54.7 72 47.2
Carub.0004s2954 Capsella rubella HOM05D001251 ORTHO05D004135 5.8e-06 53.9 66 51.5
AL4G46300 Arabidopsis lyrata HOM05D001251 ORTHO05D004135 7.6e-06 53.5 66 51.5
HanXRQChr09g0264411 Helianthus annuus HOM05D001251 ORTHO05D004135 7.6e-06 53.5 58 56.9
Oeu034954.1 Olea europaea HOM05D001251 ORTHO05D004135 7.6e-06 53.5 71 42.3
Sp4g28860 Schrenkiella parvula HOM05D001251 ORTHO05D004135 9.9e-06 53.1 60 55.0
Zm00001eb415760 Zea mays HOM05D001251 ORTHO05D004135 9.9e-06 53.1 47 63.8


User provided reference genes

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