Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051983.1 Olea europaea HOM05D000042 ORTHO05D000980 5.2e-105 384.4 197 100.0
Oeu038316.1 Olea europaea HOM05D000042 ORTHO05D000980 2.4e-65 252.7 165 80.6
Migut.C01064 Erythranthe guttata HOM05D000042 ORTHO05D000980 2.6e-40 169.5 159 61.6
SalBow7G1737 Salvia bowleyana HOM05D000042 ORTHO05D000980 1.7e-39 166.8 156 57.7
Cc10_g12760 Coffea canephora HOM05D000042 ORTHO05D000980 8.7e-36 154.5 168 53.0
SGA_v2.0_scaffold52G18923 Striga asiatica HOM05D000042 ORTHO05D000980 3.7e-34 149.1 161 56.5
Hma1.2p1_1172F.1_g263630 Hydrangea macrophylla HOM05D000042 ORTHO05D000980 1.9e-30 136.7 158 53.2
Nitab4.5_0001168g0110 Nicotiana tabacum HOM05D000042 ORTHO05D000980 1.2e-29 134.0 159 48.4
Peaxi162Scf00066g00133 Petunia axillaris HOM05D000042 ORTHO05D000980 2.7e-29 132.9 165 49.1
vmacro00861 Vaccinium macrocarpon HOM05D000042 ORTHO05D000980 5.1e-28 128.6 166 47.6
Actinidia29488 Actinidia chinensis HOM05D000042 ORTHO05D000980 7.4e-27 124.8 157 47.8
HanXRQChr05g0149341 Helianthus annuus HOM05D000042 ORTHO05D000980 2.2e-26 123.2 157 47.8
Oeu047352.1 Olea europaea HOM05D003372 ORTHO05D004539 2.0e-24 116.7 68 88.2
Lsat_1_v5_gn_6_110160 Lactuca sativa HOM05D000042 ORTHO05D000980 3.4e-24 115.9 165 45.5
Nitab4.5_0003863g0050 Nicotiana tabacum HOM05D000042 ORTHO05D000980 1.3e-23 114.0 145 46.9
GSVIVG01012110001 Vitis vinifera HOM05D000042 ORTHO05D000980 1.3e-23 114.0 162 45.7
Solyc11g005120.3 Solanum lycopersicum HOM05D000042 ORTHO05D000980 5.0e-23 112.1 150 48.0
Sopen11g001120 Solanum pennellii HOM05D000042 ORTHO05D000980 1.1e-22 110.9 150 48.0
Potri.015G125501 Populus trichocarpa HOM05D000042 ORTHO05D000980 7.9e-21 104.8 158 43.0
Cpa.g.sc30.148 Carica papaya HOM05D002990 ORTHO05D003954 3.0e-20 102.8 155 43.9
Thecc.02G157800 Theobroma cacao HOM05D000042 ORTHO05D000980 1.5e-19 100.5 155 42.6
Aqoxy1G01662 Aquilegia oxysepala HOM05D000042 ORTHO05D000980 5.7e-19 98.6 159 40.9
Gohir.D04G148000 Gossypium hirsutum HOM05D000042 ORTHO05D000980 1.3e-18 97.4 155 41.3
Gohir.A04G108400 Gossypium hirsutum HOM05D000042 ORTHO05D000980 1.7e-18 97.1 155 41.3
TAR426G0002 Trochodendron aralioides HOM05D000042 ORTHO05D000980 2.8e-18 96.3 185 38.9
Duzib052G1119 Durio zibethinus HOM05D000042 ORTHO05D000980 4.8e-18 95.5 155 40.6
Manes.11G102300 Manihot esculenta HOM05D000042 ORTHO05D000980 4.8e-18 95.5 155 41.9
Nn1g00902 Nelumbo nucifera HOM05D000042 ORTHO05D000980 4.8e-18 95.5 157 40.1
PGR119G1387 Punica granatum HOM05D000042 ORTHO05D000980 6.3e-18 95.1 159 39.6
TAR535G0002 Trochodendron aralioides HOM05D000042 ORTHO05D000980 6.3e-18 95.1 185 38.9
DCAR_014366 Daucus carota HOM05D000042 ORTHO05D000980 1.8e-17 93.6 115 47.8
Duzib248G1578 Durio zibethinus HOM05D000042 ORTHO05D000980 3.1e-17 92.8 158 39.9
THA.LOC104800811 Tarenaya hassleriana HOM05D000042 ORTHO05D000980 3.1e-17 92.8 152 41.4
Manes.04G061414 Manihot esculenta HOM05D000042 ORTHO05D000980 7.0e-17 91.7 155 43.2
CiPaw.09G075700 Carya illinoinensis HOM05D000042 ORTHO05D000980 3.5e-16 89.4 160 36.9
Lsat_1_v5_gn_6_110140 Lactuca sativa HOM05D000042 ORTHO05D000980 3.5e-16 89.4 165 40.0
CiPaw.05G170200 Carya illinoinensis HOM05D000042 ORTHO05D000980 5.9e-16 88.6 145 42.1
Dinv14682 Davidia involucrata HOM05D000042 ORTHO05D000980 5.9e-16 88.6 161 41.0
Gohir.D13G060800 Gossypium hirsutum HOM05D000042 ORTHO05D000980 7.7e-16 88.2 156 41.7
Gorai.013G069000 Gossypium raimondii HOM05D000042 ORTHO05D000980 7.7e-16 88.2 156 41.7
Nn6g33854 Nelumbo nucifera HOM05D000042 ORTHO05D000980 7.7e-16 88.2 159 40.3
Atru.chr10.451 Acer truncatum HOM05D000042 ORTHO05D000980 1.0e-15 87.8 168 33.9
Cfa008755 Carpinus fangiana HOM05D000042 ORTHO05D000980 2.2e-15 86.7 156 39.7
Zm00001eb233110 Zea mays HOM05D000042 ORTHO05D000980 5.0e-15 85.5 163 35.0
QL11p013875 Quercus lobata HOM05D000042 ORTHO05D000980 8.5e-15 84.7 165 37.0
Dinv27271 Davidia involucrata HOM05D000042 ORTHO05D000980 1.9e-14 83.6 161 41.0
CAN.G716.8 Capsicum annuum HOM05D000042 ORTHO05D000980 2.5e-14 83.2 76 56.6
Potri.007G073000 Populus trichocarpa HOM05D000042 ORTHO05D000980 5.5e-14 82.0 155 39.4
Duzib132G0305 Durio zibethinus HOM05D000042 ORTHO05D000980 9.4e-14 81.3 155 39.4
Prupe.4G113500 Prunus persica HOM05D000042 ORTHO05D000980 9.4e-14 81.3 166 37.3
CANSAT64G1927 Cannabis sativa HOM05D000042 ORTHO05D000980 1.2e-13 80.9 161 37.9
Ah.07g205650 Amaranthus hybridus HOM05D000042 ORTHO05D000980 2.1e-13 80.1 158 35.4
TAR624G0996 Trochodendron aralioides HOM05D000042 ORTHO05D000980 2.1e-13 80.1 159 40.3
TWI74G0210 Tripterygium wilfordii HOM05D000042 ORTHO05D000980 3.6e-13 79.3 163 38.7
ATR0661G131 Amborella trichopoda HOM05D000042 ORTHO05D000980 6.1e-13 78.6 158 39.9
Sp2g23890 Schrenkiella parvula HOM05D000042 ORTHO05D000980 6.1e-13 78.6 155 38.7
CiPaw.06G061600 Carya illinoinensis HOM05D000042 ORTHO05D000980 8.0e-13 78.2 153 38.6
PSO339G5414 Papaver somniferum HOM05D000042 ORTHO05D000980 1.8e-12 77.0 194 34.0
A09p07040 Brassica napus HOM05D000042 ORTHO05D000980 3.0e-12 76.3 155 38.7
BraA09t36352Z Brassica rapa HOM05D000042 ORTHO05D000980 3.0e-12 76.3 155 38.7
Haze_06093 Corylus avellana HOM05D000042 ORTHO05D000980 3.0e-12 76.3 156 36.5
Ciclev10032489m.g Citrus clementina HOM05D000042 ORTHO05D000980 3.9e-12 75.9 157 38.9
BcaB04g19885 Brassica carinata HOM05D000042 ORTHO05D000980 6.7e-12 75.1 155 36.8
BcaC04g23484 Brassica carinata HOM05D000042 ORTHO05D000980 8.8e-12 74.7 155 38.7
Ciclev10016394m.g Citrus clementina HOM05D000042 ORTHO05D000980 8.8e-12 74.7 162 34.0
BcaB07g29861 Brassica carinata HOM05D000042 ORTHO05D000980 1.1e-11 74.3 155 38.1
AL6G34490 Arabidopsis lyrata HOM05D000042 ORTHO05D000980 2.0e-11 73.6 163 37.4
Cfa000696 Carpinus fangiana HOM05D000042 ORTHO05D000980 2.6e-11 73.2 156 34.6
FAN21G1321 Fragaria x ananassa HOM05D002062 ORTHO05D000980 2.6e-11 73.2 175 32.6
RcHm_v2.0_Chr5g0020391 Rosa chinensis HOM05D000042 ORTHO05D000980 2.6e-11 73.2 171 32.2
BcaB04g19883 Brassica carinata HOM05D000042 ORTHO05D000980 3.3e-11 72.8 155 36.1
Os02g0170300 Oryza sativa ssp. japonica HOM05D000042 ORTHO05D000980 3.3e-11 72.8 163 35.0
FvH4_3g12460 Fragaria vesca HOM05D000042 ORTHO05D000980 4.4e-11 72.4 167 33.5
FAN16G2530 Fragaria x ananassa HOM05D000042 ORTHO05D000980 4.4e-11 72.4 167 33.5
C07p44300 Brassica napus HOM05D000042 ORTHO05D000980 5.7e-11 72.0 157 38.2
BolC7t44953H Brassica oleracea HOM05D000042 ORTHO05D000980 5.7e-11 72.0 157 38.2
BcaC03g18031 Brassica carinata HOM05D000042 ORTHO05D000980 7.4e-11 71.6 155 34.8
C02p60940 Brassica napus HOM05D000042 ORTHO05D000980 7.4e-11 71.6 155 34.8
C09p07850 Brassica napus HOM05D000042 ORTHO05D000980 7.4e-11 71.6 155 37.4
BolC2t12144H Brassica oleracea HOM05D000042 ORTHO05D000980 7.4e-11 71.6 155 34.8
Potri.012G125600 Populus trichocarpa HOM05D000042 ORTHO05D000980 7.4e-11 71.6 157 36.9
MD10G1231100 Malus domestica HOM05D000042 ORTHO05D000980 1.3e-10 70.9 169 36.7
GSVIVG01026207001 Vitis vinifera HOM05D000042 ORTHO05D000980 1.3e-10 70.9 109 40.4
PSO384G0064 Papaver somniferum HOM05D000042 ORTHO05D000980 1.7e-10 70.5 180 34.4
Ca_12406_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000980 2.8e-10 69.7 159 34.0
Phvul.003G003800 Phaseolus vulgaris HOM05D000042 ORTHO05D000980 2.8e-10 69.7 142 34.5
Atru.chr11.1138 Acer truncatum HOM05D000042 ORTHO05D000980 3.7e-10 69.3 158 37.3
CARHR190280 Cardamine hirsuta HOM05D000042 ORTHO05D000980 6.3e-10 68.6 155 35.5
MD05G1250100 Malus domestica HOM05D000042 ORTHO05D000980 6.3e-10 68.6 156 33.3
CsaV3_6G052910 Cucumis sativus L. HOM05D000042 ORTHO05D000980 8.2e-10 68.2 74 47.3
A03p46300 Brassica napus HOM05D000042 ORTHO05D000980 1.4e-09 67.4 157 37.6
BraA03t13754Z Brassica rapa HOM05D000042 ORTHO05D000980 1.4e-09 67.4 157 37.6
MBI18_g11462_MAGBIO Magnolia biondii HOM05D000042 ORTHO05D000980 1.4e-09 67.4 157 35.7
Gohir.A13G061100 Gossypium hirsutum HOM05D000042 ORTHO05D000980 1.8e-09 67.0 156 37.2
COL.COLO4_33054 Corchorus olitorius HOM05D000042 ORTHO05D000980 3.1e-09 66.2 156 36.5
Glyma.09G283800 Glycine max HOM05D000042 ORTHO05D000980 3.1e-09 66.2 159 33.3
Carub.0006s2103 Capsella rubella HOM05D000042 ORTHO05D000980 5.3e-09 65.5 158 34.8
A02p41080 Brassica napus HOM05D000042 ORTHO05D000980 7.0e-09 65.1 156 34.0
BraA02t09052Z Brassica rapa HOM05D000042 ORTHO05D000980 7.0e-09 65.1 156 34.0
HPP92_016678 Vanilla planifolia HOM05D000042 ORTHO05D000980 7.0e-09 65.1 155 34.2
Glyma.20G001900 Glycine max HOM05D000042 ORTHO05D000980 9.1e-09 64.7 159 32.7
Medtr1g038300 Medicago truncatula HOM05D000042 ORTHO05D000980 1.2e-08 64.3 135 32.6
TPR.G29778 Trifolium pratense HOM05D000042 ORTHO05D000980 1.2e-08 64.3 118 35.6
Thhalv10005641m.g Eutrema salsugineum HOM05D000042 ORTHO05D000980 2.6e-08 63.2 155 36.1
VMungo0251G0256 Vigna mungo HOM05D000042 ORTHO05D000980 3.5e-08 62.8 134 33.6
Psat6g099720 Pisum sativum HOM05D000042 ORTHO05D000980 5.9e-08 62.0 124 32.3
FAN25G2727 Fragaria x ananassa HOM05D000042 ORTHO05D000980 2.2e-07 60.1 164 31.1
Sabra05G0075100 Salix brachista HOM05D000042 ORTHO05D000980 2.2e-07 60.1 75 49.3
Sed0000693 Sechium edule HOM05D000042 ORTHO05D000980 2.2e-07 60.1 107 41.1
CDE06G1415 Ceratophyllum demersum HOM05D000042 ORTHO05D000028 1.1e-06 57.8 75 41.3
AUR62042929 Chenopodium quinoa HOM05D000042 ORTHO05D000980 1.5e-06 57.4 80 38.8
MELO3C007017.2 Cucumis melo HOM05D000042 ORTHO05D000980 4.2e-06 55.8 78 39.7
Lj2g0025010 Lotus japonicus HOM05D000042 ORTHO05D000980 4.2e-06 55.8 157 33.8
Sc13g0008240 Simmondsia chinensis HOM05D000042 ORTHO05D000028 7.2e-06 55.1 73 45.2
TWI38G2187 Tripterygium wilfordii HOM05D000042 ORTHO05D000980 9.4e-06 54.7 60 50.0


User provided reference genes

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