Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051665.1 Olea europaea HOM05D006308 ORTHO05D007820 1.7e-108 396.0 198 100.0
CSS0031885 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 9.0e-65 250.8 198 67.2
CSS0041769 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 9.0e-65 250.8 198 67.2
MSTRG.7060 Avicennia marina HOM05D006308 ORTHO05D007820 1.0e-63 247.3 198 65.2
arahy.Tifrunner.gnm1.ann1.HXV25C Arachis hypogaea HOM05D006308 ORTHO05D007820 1.1e-62 243.8 199 65.3
Haze_08539 Corylus avellana HOM05D006308 ORTHO05D007820 5.5e-62 241.5 201 64.2
Sabra11G0127800 Salix brachista HOM05D006308 ORTHO05D007820 1.6e-61 240.0 202 62.9
Hma1.2p1_0334F.1_g128750 Hydrangea macrophylla HOM05D006308 ORTHO05D007820 2.1e-61 239.6 197 65.0
ClCG07G010660 Citrullus lanatus HOM05D006308 ORTHO05D007820 2.7e-61 239.2 195 63.6
MELO3C016177.2 Cucumis melo HOM05D006308 ORTHO05D007820 3.5e-61 238.8 195 63.1
Manes.14G016400 Manihot esculenta HOM05D006308 ORTHO05D007820 3.5e-61 238.8 198 63.1
Ciclev10021874m.g Citrus clementina HOM05D006308 ORTHO05D007820 7.9e-61 237.7 198 62.6
CsaV3_4G007640 Cucumis sativus L. HOM05D006308 ORTHO05D007820 1.3e-60 236.9 195 62.6
arahy.Tifrunner.gnm1.ann1.1EF43V Arachis hypogaea HOM05D006308 ORTHO05D007820 3.0e-60 235.7 198 62.6
Atru.chr2.1759 Acer truncatum HOM05D006308 ORTHO05D007820 3.9e-60 235.3 198 61.6
CiPaw.12G004900 Carya illinoinensis HOM05D006308 ORTHO05D007820 3.9e-60 235.3 197 62.9
Sed0010671 Sechium edule HOM05D006308 ORTHO05D007820 3.9e-60 235.3 194 63.4
Thecc.07G152500 Theobroma cacao HOM05D006308 ORTHO05D007820 3.9e-60 235.3 196 63.8
SalBow8G4544 Salvia bowleyana HOM05D006308 ORTHO05D007820 6.7e-60 234.6 198 64.1
Migut.M01556 Erythranthe guttata HOM05D006308 ORTHO05D007820 8.7e-60 234.2 198 64.1
CAN.G943.39 Capsicum annuum HOM05D006308 ORTHO05D007820 3.3e-59 232.3 196 62.8
Gorai.009G355200 Gossypium raimondii HOM05D006308 ORTHO05D007820 4.3e-59 231.9 198 62.1
COL.COLO4_07328 Corchorus olitorius HOM05D006308 ORTHO05D007820 5.7e-59 231.5 198 61.1
Gohir.A04G049000 Gossypium hirsutum HOM05D006308 ORTHO05D007820 5.7e-59 231.5 198 62.1
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 5.7e-59 231.5 193 63.7
GSVIVG01020411001 Vitis vinifera HOM05D006308 ORTHO05D007820 5.7e-59 231.5 191 64.9
Lj1A905G40 Lonicera japonica HOM05D006308 ORTHO05D007820 7.4e-59 231.1 198 62.1
SGA_v2.0_scaffold186G40217 Striga asiatica HOM05D006308 ORTHO05D007820 7.4e-59 231.1 193 64.8
MBI04_g08705_MAGBIO Magnolia biondii HOM05D006308 ORTHO05D007820 1.6e-58 229.9 198 62.1
QL08p064492 Quercus lobata HOM05D006308 ORTHO05D007820 1.6e-58 229.9 195 62.6
Duzib213G0994 Durio zibethinus HOM05D006308 ORTHO05D007820 2.1e-58 229.6 198 60.6
Nn6g31547 Nelumbo nucifera HOM05D006308 ORTHO05D007820 3.7e-58 228.8 198 61.1
Rhsim06G0239000 Rhododendron simsii HOM05D006308 ORTHO05D007820 3.7e-58 228.8 198 60.1
Lalb_Chr20g0108751 Lupinus albus HOM05D006308 ORTHO05D007820 6.3e-58 228.0 198 60.1
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 6.3e-58 228.0 193 62.7
Peaxi162Scf00452g00832 Petunia axillaris HOM05D006308 ORTHO05D007820 6.3e-58 228.0 193 61.7
Potri.011G142900 Populus trichocarpa HOM05D006308 ORTHO05D007820 6.3e-58 228.0 195 61.0
Solyc07g066460.3 Solanum lycopersicum HOM05D006308 ORTHO05D007820 6.3e-58 228.0 196 61.2
Sopen07g034640 Solanum pennellii HOM05D006308 ORTHO05D007820 6.3e-58 228.0 196 61.2
PGSC0003DMG400022127 Solanum tuberosum HOM05D006308 ORTHO05D007820 6.3e-58 228.0 196 61.2
Gohir.D05G331300 Gossypium hirsutum HOM05D006308 ORTHO05D007820 1.1e-57 227.3 198 60.6
Sabra16G0310800 Salix brachista HOM05D006308 ORTHO05D007820 1.1e-57 227.3 198 61.1
AL3G24610 Arabidopsis lyrata HOM05D006308 ORTHO05D007820 1.4e-57 226.9 194 61.3
Phvul.005G057100 Phaseolus vulgaris HOM05D006308 ORTHO05D007820 1.8e-57 226.5 198 60.6
Sed0016869 Sechium edule HOM05D006308 ORTHO05D007820 1.8e-57 226.5 194 60.8
ECA234G3728 Erigeron canadensis HOM05D006308 ORTHO05D007820 3.1e-57 225.7 195 61.0
unitig_46.g18521 Utricularia gibba HOM05D006308 ORTHO05D007820 4.1e-57 225.3 195 63.1
Eucgr.F01457 Eucalyptus grandis HOM05D006308 ORTHO05D007820 5.3e-57 224.9 194 61.9
vmacro11665 Vaccinium macrocarpon HOM05D006308 ORTHO05D007820 5.3e-57 224.9 196 60.2
CARHR087450 Cardamine hirsuta HOM05D006308 ORTHO05D007820 6.9e-57 224.6 194 59.8
CDE06G0902 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 6.9e-57 224.6 198 59.6
Aqoxy5G00928 Aquilegia oxysepala HOM05D006308 ORTHO05D007820 9.0e-57 224.2 192 61.5
AT3G12930 Arabidopsis thaliana HOM05D006308 ORTHO05D007820 2.0e-56 223.0 198 60.1
Carub.0005s0924 Capsella rubella HOM05D006308 ORTHO05D007820 2.0e-56 223.0 198 59.1
HanXRQChr10g0305791 Helianthus annuus HOM05D006308 ORTHO05D007820 2.0e-56 223.0 195 60.5
Sp3g11070 Schrenkiella parvula HOM05D006308 ORTHO05D007820 4.5e-56 221.9 198 59.1
Glyma.08G172200 Glycine max HOM05D006308 ORTHO05D007820 7.6e-56 221.1 194 59.8
Potri.001G458600 Populus trichocarpa HOM05D006308 ORTHO05D007820 7.6e-56 221.1 198 59.1
Thhalv10021431m.g Eutrema salsugineum HOM05D006308 ORTHO05D007820 1.0e-55 220.7 198 59.1
MD10G1202500 Malus domestica HOM05D006308 ORTHO05D007820 1.7e-55 219.9 198 57.6
EL10Ac2g03321 Beta vulgaris HOM05D006308 ORTHO05D007820 2.2e-55 219.5 196 58.7
Sc06g0001530 Simmondsia chinensis HOM05D006308 ORTHO05D007820 2.2e-55 219.5 195 57.4
DCAR_016822 Daucus carota HOM05D006308 ORTHO05D007820 2.9e-55 219.2 194 60.8
Glyma.15G255800 Glycine max HOM05D006308 ORTHO05D007820 3.8e-55 218.8 194 59.3
Medtr2g069470 Medicago truncatula HOM05D006308 ORTHO05D007820 5.0e-55 218.4 197 57.4
TPR.G9745 Trifolium pratense HOM05D006308 ORTHO05D007820 5.0e-55 218.4 197 57.4
RcHm_v2.0_Chr5g0026561 Rosa chinensis HOM05D006308 ORTHO05D007820 6.5e-55 218.0 198 57.6
Ca_03675_v3 Cicer arietinum L. HOM05D006308 ORTHO05D007820 8.4e-55 217.6 198 57.6
Lj3g0010937 Lotus japonicus HOM05D006308 ORTHO05D007820 8.4e-55 217.6 199 58.8
Ah.16g106540 Amaranthus hybridus HOM05D006308 ORTHO05D007820 1.1e-54 217.2 195 56.9
AUR62043126 Chenopodium quinoa HOM05D006308 ORTHO05D007820 1.1e-54 217.2 195 58.5
THA.LOC104822752 Tarenaya hassleriana HOM05D006308 ORTHO05D007820 1.1e-54 217.2 194 60.8
FAN16G0301 Fragaria x ananassa HOM05D006308 ORTHO05D007820 1.4e-54 216.9 198 57.1
Aa31LG8G150 Aethionema arabicum HOM05D006308 ORTHO05D007820 2.5e-54 216.1 193 58.5
A01p40570 Brassica napus HOM05D006308 ORTHO05D007820 2.5e-54 216.1 198 56.6
C01p52210 Brassica napus HOM05D006308 ORTHO05D007820 2.5e-54 216.1 198 56.6
BolC1t05161H Brassica oleracea HOM05D006308 ORTHO05D007820 2.5e-54 216.1 198 56.6
CDE08G1673 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 2.5e-54 216.1 191 58.6
FvH4_3g15760 Fragaria vesca HOM05D006308 ORTHO05D007820 2.5e-54 216.1 198 56.6
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 2.5e-54 216.1 198 56.6
FAN21G3038 Fragaria x ananassa HOM05D006308 ORTHO05D007820 2.5e-54 216.1 198 56.6
Psat1g011160 Pisum sativum HOM05D006308 ORTHO05D007820 2.5e-54 216.1 195 56.9
CANSAT80G1356 Cannabis sativa HOM05D006308 ORTHO05D007820 3.2e-54 215.7 194 57.7
BcaC09g48280 Brassica carinata HOM05D006308 ORTHO05D007820 5.5e-54 214.9 198 56.1
TWI39G0290 Tripterygium wilfordii HOM05D006308 ORTHO05D007820 5.5e-54 214.9 194 58.8
Lsat_1_v5_gn_5_125241 Lactuca sativa HOM05D006308 ORTHO05D007820 9.3e-54 214.2 196 56.6
ATR0605G149 Amborella trichopoda HOM05D006308 ORTHO05D007820 1.6e-53 213.4 190 60.0
BraA05t22456Z Brassica rapa HOM05D006308 ORTHO05D007820 1.6e-53 213.4 198 56.1
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 2.1e-53 213.0 198 56.1
BcaC05g29223 Brassica carinata HOM05D006308 ORTHO05D007820 2.7e-53 212.6 198 56.1
BolC5t34167H Brassica oleracea HOM05D006308 ORTHO05D007820 2.7e-53 212.6 198 56.1
Cc05_g16080 Coffea canephora HOM05D006308 ORTHO05D007820 2.7e-53 212.6 202 56.9
BraA01t04092Z Brassica rapa HOM05D006308 ORTHO05D007820 3.5e-53 212.2 198 56.1
A05p36560 Brassica napus HOM05D006308 ORTHO05D007820 6.1e-53 211.5 198 55.6
PGR083G0385 Punica granatum HOM05D006308 ORTHO05D007820 7.9e-53 211.1 193 60.1
Prupe.4G139700 Prunus persica HOM05D006308 ORTHO05D007820 6.7e-52 208.0 205 55.1
BcaB06g25499 Brassica carinata HOM05D006308 ORTHO05D007820 1.1e-49 200.7 200 53.5
HPP92_015477 Vanilla planifolia HOM05D006308 ORTHO05D007820 1.4e-49 200.3 189 56.6
C05p54980 Brassica napus HOM05D006308 ORTHO05D007820 4.1e-49 198.7 223 49.8
Hund12461 Selenicereus undatus HOM05D006308 ORTHO05D007820 9.0e-49 197.6 192 53.6
PSO170G1595 Papaver somniferum HOM05D006308 ORTHO05D007820 2.6e-48 196.1 198 53.5
PSO017G0504 Papaver somniferum HOM05D006308 ORTHO05D007820 3.4e-48 195.7 198 53.0
Mapoly0031s0088 Marchantia polymorpha HOM05D006308 ORTHO05D007820 2.1e-45 186.4 190 51.1
Os09g0493600 Oryza sativa ssp. japonica HOM05D006308 ORTHO05D007820 1.8e-44 183.3 117 76.1
SEGI_12516 Sequoiadendron giganteum HOM05D006308 ORTHO05D007820 2.8e-42 176.0 190 51.1
Pp3c9_2790 Physcomitrium patens HOM05D006308 ORTHO05D007820 1.1e-41 174.1 190 47.4
Dinv42509 Davidia involucrata HOM05D006308 ORTHO05D007820 1.8e-41 173.3 158 60.1
TAR381G0490 Trochodendron aralioides HOM05D006308 ORTHO05D007820 2.9e-39 166.0 161 56.5
AagrBONN_evm.TU.Sc2ySwM_228.3592 Anthoceros agrestis HOM05D006308 ORTHO05D007820 2.5e-38 162.9 190 45.3
VMungo1080G0665 Vigna mungo HOM05D006308 ORTHO05D007820 1.2e-37 160.6 158 55.7
Actinidia07352 Actinidia chinensis HOM05D006308 ORTHO05D007820 2.7e-37 159.5 87 83.9
Manes.06G172000 Manihot esculenta HOM05D006308 ORTHO05D007820 3.0e-36 156.0 191 48.7
Actinidia12793 Actinidia chinensis HOM05D006308 ORTHO05D007820 5.3e-33 145.2 195 44.6
SMO367G0472 Selaginella moellendorffii HOM05D006308 ORTHO05D007820 2.6e-32 142.9 124 54.0
Nn3g19990 Nelumbo nucifera HOM05D006308 ORTHO05D007820 7.5e-27 124.8 124 56.5
Nn3g19991 Nelumbo nucifera HOM05D006308 ORTHO05D007820 7.5e-27 124.8 124 56.5
CAN.G337.145 Capsicum annuum HOM05D006308 ORTHO05D007820 1.3e-23 114.0 60 85.0
Cre03.g205600 Chlamydomonas reinhardtii HOM05D006308 ORTHO05D007820 1.5e-22 110.5 112 47.3
MCO04G467 Micromonas commoda HOM05D006308 ORTHO05D007820 4.2e-22 109.0 117 41.9
Pp3c15_7010 Physcomitrium patens HOM05D006308 ORTHO05D007820 6.1e-21 105.1 104 46.2
Nn3g18400 Nelumbo nucifera HOM05D006308 ORTHO05D007820 5.2e-20 102.1 128 48.4
PRCOL_00002538 Prasinoderma coloniale HOM05D006308 ORTHO05D007820 1.5e-19 100.5 111 45.0
A01p40580 Brassica napus HOM05D006308 ORTHO05D007820 6.1e-13 78.6 112 43.8
AUR62039167 Chenopodium quinoa HOM05D007854 ORTHO05D138328 7.5e-11 71.6 38 81.6
CBR_g48397 Chara braunii HOM05D006308 ORTHO05D007820 9.2e-09 64.7 45 66.7
Cpa.g.sc10.49 Carica papaya HOM05D006308 ORTHO05D007820 1.0e-07 61.2 41 70.7


User provided reference genes

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