Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051395.1 Olea europaea HOM05D006642 ORTHO05D008856 8.2e-175 617.8 579 100.0
MSTRG.6613 Avicennia marina HOM05D006642 ORTHO05D008856 9.5e-115 418.3 305 87.9
CSS0001521 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 6.4e-111 405.6 305 85.9
CSS0049788 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 6.4e-111 405.6 305 85.9
Nitab4.5_0001843g0110 Nicotiana tabacum HOM05D006642 ORTHO05D008856 3.5e-109 399.8 307 84.4
Sopen07g023170 Solanum pennellii HOM05D006642 ORTHO05D008856 3.5e-109 399.8 304 85.5
Nitab4.5_0007665g0020 Nicotiana tabacum HOM05D006642 ORTHO05D008856 6.0e-109 399.1 307 84.7
Solyc07g043600.4 Solanum lycopersicum HOM05D006642 ORTHO05D008856 1.0e-108 398.3 304 85.2
PGSC0003DMG400015924 Solanum tuberosum HOM05D006642 ORTHO05D008856 1.0e-108 398.3 304 85.2
SGA_v2.0_scaffold73G24452 Striga asiatica HOM05D006642 ORTHO05D008856 1.5e-107 394.4 304 83.9
Cc05_g00360 Coffea canephora HOM05D006642 ORTHO05D008856 9.6e-107 391.7 307 81.4
CAN.G819.5 Capsicum annuum HOM05D006642 ORTHO05D008856 1.2e-106 391.3 304 83.9
TAR624G0481 Trochodendron aralioides HOM05D006642 ORTHO05D008856 1.2e-106 391.3 303 83.2
DCAR_023000 Daucus carota HOM05D006642 ORTHO05D008856 4.7e-106 389.4 303 83.2
Ciclev10014674m.g Citrus clementina HOM05D006642 ORTHO05D008856 1.8e-105 387.5 305 82.0
Nn4g26621 Nelumbo nucifera HOM05D006642 ORTHO05D008856 1.8e-105 387.5 302 82.1
CANSAT64G1219 Cannabis sativa HOM05D006642 ORTHO05D008856 3.1e-105 386.7 305 82.3
Dinv09723 Davidia involucrata HOM05D006642 ORTHO05D008856 3.1e-105 386.7 305 83.9
TWI23G0590 Tripterygium wilfordii HOM05D006642 ORTHO05D008856 8.9e-105 385.2 296 85.1
Hma1.2p1_0073F.1_g038540 Hydrangea macrophylla HOM05D006642 ORTHO05D008856 2.0e-104 384.0 304 82.2
unitig_899.g15288 Utricularia gibba HOM05D006642 ORTHO05D008856 2.0e-104 384.0 299 82.9
MD09G1145700 Malus domestica HOM05D006642 ORTHO05D008856 1.3e-103 381.3 305 81.3
vmacro19989 Vaccinium macrocarpon HOM05D006642 ORTHO05D008856 2.2e-103 380.6 304 81.6
ECA248G0755 Erigeron canadensis HOM05D006642 ORTHO05D008856 8.4e-103 378.6 304 81.6
HanXRQChr01g0029361 Helianthus annuus HOM05D006642 ORTHO05D008856 8.4e-103 378.6 304 81.2
Prupe.3G180100 Prunus persica HOM05D006642 ORTHO05D008856 8.4e-103 378.6 305 82.0
MBI02_g40097_MAGBIO Magnolia biondii HOM05D006642 ORTHO05D008856 4.2e-102 376.3 297 83.2
Manes.09G006600 Manihot esculenta HOM05D006642 ORTHO05D008856 4.2e-102 376.3 305 79.7
Aqoxy5G04293 Aquilegia oxysepala HOM05D006642 ORTHO05D008856 9.3e-102 375.2 306 79.4
Lsat_1_v5_gn_1_49160 Lactuca sativa HOM05D006642 ORTHO05D008856 9.3e-102 375.2 304 74.3
PGR142G3441 Punica granatum HOM05D006642 ORTHO05D008856 1.6e-101 374.4 306 80.4
Atru.chr6.2750 Acer truncatum HOM05D006642 ORTHO05D008856 2.1e-101 374.0 304 81.9
Cfa023538 Carpinus fangiana HOM05D006642 ORTHO05D008856 4.6e-101 372.9 305 80.7
Potri.001G220300 Populus trichocarpa HOM05D006642 ORTHO05D008856 4.6e-101 372.9 305 80.7
Actinidia39996 Actinidia chinensis HOM05D006642 ORTHO05D008856 6.0e-101 372.5 304 80.3
Eucgr.K01239 Eucalyptus grandis HOM05D006642 ORTHO05D008856 7.8e-101 372.1 298 80.9
Sed0004539 Sechium edule HOM05D006642 ORTHO05D008856 1.7e-100 370.9 304 79.9
Thecc.01G164600 Theobroma cacao HOM05D006642 ORTHO05D008856 3.9e-100 369.8 295 81.0
Migut.M00108 Erythranthe guttata HOM05D006642 ORTHO05D008856 5.1e-100 369.4 305 64.3
COL.COLO4_29911 Corchorus olitorius HOM05D006642 ORTHO05D008856 1.5e-99 367.9 295 82.0
Sabra16G0124100 Salix brachista HOM05D006642 ORTHO05D008856 3.3e-99 366.7 305 79.3
Duzib147G0394 Durio zibethinus HOM05D006642 ORTHO05D008856 4.3e-99 366.3 296 74.3
Glyma.10G285200 Glycine max HOM05D006642 ORTHO05D008856 5.6e-99 365.9 305 79.3
arahy.Tifrunner.gnm1.ann1.T7AVMG Arachis hypogaea HOM05D006642 ORTHO05D008856 9.6e-99 365.2 303 78.9
Glyma.20G103800 Glycine max HOM05D006642 ORTHO05D008856 4.8e-98 362.8 305 79.3
AUR62002293 Chenopodium quinoa HOM05D006642 ORTHO05D008856 6.2e-98 362.5 303 79.9
Phvul.007G015300 Phaseolus vulgaris HOM05D006642 ORTHO05D008856 6.2e-98 362.5 305 78.4
Gorai.012G039700 Gossypium raimondii HOM05D006642 ORTHO05D008856 8.1e-98 362.1 295 81.0
Gohir.D04G035200 Gossypium hirsutum HOM05D006642 ORTHO05D008856 1.4e-97 361.3 295 81.0
Gohir.A05G380400 Gossypium hirsutum HOM05D006642 ORTHO05D008856 1.8e-97 360.9 295 81.0
Lj5g0013784 Lotus japonicus HOM05D006642 ORTHO05D008856 2.4e-97 360.5 299 79.6
Sc14g0005210 Simmondsia chinensis HOM05D006642 ORTHO05D008856 3.1e-97 360.1 298 79.5
VMungo0720G2195 Vigna mungo HOM05D000164 ORTHO05D000096 4.0e-97 359.8 305 77.7
Sp5g03940 Schrenkiella parvula HOM05D006642 ORTHO05D008856 5.3e-97 359.4 304 80.3
ATR1098G151 Amborella trichopoda HOM05D006642 ORTHO05D008856 9.0e-97 358.6 299 77.9
CDE05G1065 Ceratophyllum demersum HOM05D006642 ORTHO05D008856 1.5e-96 357.8 300 80.0
Ah.07g201920 Amaranthus hybridus HOM05D006642 ORTHO05D008856 3.4e-96 356.7 299 80.3
THA.LOC104802288 Tarenaya hassleriana HOM05D006642 ORTHO05D008856 3.4e-96 356.7 304 81.2
Thhalv10005856m.g Eutrema salsugineum HOM05D006642 ORTHO05D008856 7.6e-96 355.5 304 79.9
AUR62015397 Chenopodium quinoa HOM05D006642 ORTHO05D008856 2.9e-95 353.6 335 59.1
Os08g0191900 Oryza sativa ssp. japonica HOM05D006642 ORTHO05D008856 6.4e-95 352.4 303 77.2
RcHm_v2.0_Chr2g0152561 Rosa chinensis HOM05D006642 ORTHO05D008856 1.1e-94 351.7 305 77.7
Ah.07g198470 Amaranthus hybridus HOM05D006642 ORTHO05D008856 1.9e-94 350.9 299 62.2
EL10Ac8g19571 Beta vulgaris HOM05D006642 ORTHO05D008856 2.4e-94 350.5 321 75.7
Ca_11227_v3 Cicer arietinum L. HOM05D006642 ORTHO05D008856 2.4e-94 350.5 303 77.6
Hund08483 Selenicereus undatus HOM05D006642 ORTHO05D008856 3.2e-94 350.1 304 76.6
Carub.0005s2580 Capsella rubella HOM05D006642 ORTHO05D008856 4.2e-94 349.7 304 78.9
GSVIVG01020809001 Vitis vinifera HOM05D006642 ORTHO05D008856 1.2e-93 348.2 301 78.7
CARHR169450 Cardamine hirsuta HOM05D006642 ORTHO05D008856 1.6e-93 347.8 304 78.3
PSO675G5462 Papaver somniferum HOM05D006642 ORTHO05D008856 2.1e-93 347.4 302 77.2
Zm00001eb413390 Zea mays HOM05D006642 ORTHO05D008856 7.9e-93 345.5 298 76.2
HPP92_011054 Vanilla planifolia HOM05D006642 ORTHO05D008856 2.3e-92 344.0 302 75.2
Lalb_Chr06g0163881 Lupinus albus HOM05D006642 ORTHO05D008856 3.9e-92 343.2 298 76.8
Aa31LG10G13530 Aethionema arabicum HOM05D006642 ORTHO05D008856 5.1e-92 342.8 304 77.6
AT3G59040 Arabidopsis thaliana HOM05D006642 ORTHO05D008856 6.6e-92 342.4 304 78.0
Medtr1g114300 Medicago truncatula HOM05D006642 ORTHO05D008856 1.1e-91 341.7 304 75.3
FAN02G0564 Fragaria x ananassa HOM05D006642 ORTHO05D008856 5.6e-91 339.3 304 76.3
PSO541G5267 Papaver somniferum HOM05D006642 ORTHO05D008856 7.4e-91 339.0 301 76.1
ClCG11G016650 Citrullus lanatus HOM05D006642 ORTHO05D008856 2.1e-90 337.4 305 75.7
FAN05G5081 Fragaria x ananassa HOM05D006642 ORTHO05D008856 2.1e-90 337.4 304 76.3
Psat6g233520 Pisum sativum HOM05D006642 ORTHO05D008856 2.8e-90 337.0 303 74.6
FvH4_6g38970 Fragaria vesca HOM05D006642 ORTHO05D008856 2.4e-89 334.0 304 76.0
FAN14G1916 Fragaria x ananassa HOM05D006642 ORTHO05D008856 4.0e-89 333.2 304 75.7
CsaV3_4G032160 Cucumis sativus L. HOM05D006642 ORTHO05D008856 4.9e-87 326.2 305 73.4
TPR.G4069 Trifolium pratense HOM05D006642 ORTHO05D008856 1.9e-86 324.3 303 71.6
Rhsim05G0172300 Rhododendron simsii HOM05D006642 ORTHO05D008856 7.9e-85 318.9 305 73.4
A09p51470 Brassica napus HOM05D006642 ORTHO05D008856 1.5e-83 314.7 304 74.7
C08p34230 Brassica napus HOM05D006642 ORTHO05D008856 9.6e-83 312.0 304 74.0
BolC8t51020H Brassica oleracea HOM05D006642 ORTHO05D008856 9.6e-83 312.0 304 74.0
BcaC07g40235 Brassica carinata HOM05D006642 ORTHO05D008856 2.1e-82 310.8 304 73.7
BcaC07g40308 Brassica carinata HOM05D006642 ORTHO05D008856 1.2e-80 305.1 293 75.1
BraA09t40583Z Brassica rapa HOM05D006642 ORTHO05D008856 6.5e-79 299.3 304 72.0
MD17G1132200 Malus domestica HOM05D006642 ORTHO05D008856 9.6e-75 285.4 291 69.4
QL02p091883 Quercus lobata HOM05D006642 ORTHO05D008856 1.3e-74 285.0 306 69.0
QL93p2017_0027 Quercus lobata HOM05D006642 ORTHO05D008856 2.6e-72 277.3 292 69.9
Cpa.g.sc50.124 Carica papaya HOM05D006642 ORTHO05D008856 1.9e-70 271.2 305 52.1
MELO3C026387.2 Cucumis melo HOM05D006642 ORTHO05D008856 5.1e-68 263.1 283 69.6
Haze_13626 Corylus avellana HOM05D006642 ORTHO05D008856 5.3e-65 253.1 211 85.8
Lj1A585G41 Lonicera japonica HOM05D006642 ORTHO05D008856 2.5e-62 244.2 148 80.4
Nn4g26620 Nelumbo nucifera HOM05D006642 ORTHO05D008856 8.2e-58 229.2 134 80.6
EL10Ac5g11659 Beta vulgaris HOM05D006642 ORTHO05D008856 2.5e-54 217.6 150 72.7
AL5G40920 Arabidopsis lyrata HOM05D006642 ORTHO05D008856 4.7e-53 213.4 196 84.7
HPP92_011074 Vanilla planifolia HOM05D006642 ORTHO05D008856 2.6e-51 207.6 146 68.5
CiPaw.03G197600 Carya illinoinensis HOM05D006642 ORTHO05D008856 2.0e-43 181.4 103 85.4
EL10Ac5g11660 Beta vulgaris HOM05D006642 ORTHO05D008856 7.7e-40 169.5 103 80.6
Mapoly0047s0104 Marchantia polymorpha HOM05D006642 ORTHO05D008856 6.3e-34 149.8 261 52.1
Pp3c26_11100 Physcomitrium patens HOM05D006642 ORTHO05D008856 2.7e-32 144.4 262 49.6
FAN09G4833 Fragaria x ananassa HOM05D006642 ORTHO05D008856 8.5e-31 139.4 93 74.2
C06p25860 Brassica napus HOM05D000461 ORTHO05D001840 3.0e-28 131.0 298 34.6
SMO259G0047 Selaginella moellendorffii HOM05D006642 ORTHO05D008856 6.8e-28 129.8 266 44.0
BcaB02g07488 Brassica carinata HOM05D006642 ORTHO05D008856 3.5e-24 117.5 74 77.0
BcaC08g44955 Brassica carinata HOM05D006642 ORTHO05D008856 1.7e-23 115.2 82 69.5
BcaB02g07487 Brassica carinata HOM05D000461 ORTHO05D001840 8.9e-20 102.8 77 66.2
BolC6t37747H Brassica oleracea HOM05D006642 ORTHO05D032904 5.7e-19 100.1 93 58.1
BcaC08g44954 Brassica carinata HOM05D006642 ORTHO05D032904 4.4e-11 73.9 77 53.2
Lj5g0013792 Lotus japonicus HOM05D006642 ORTHO05D008856 2.3e-07 61.6 48 60.4
Ca_27070_v3 Cicer arietinum L. HOM05D002503 ORTHO05D009151 3.0e-07 61.2 113 27.4
VMungo1215G1169 Vigna mungo HOM05D007173 ORTHO05D009151 5.0e-07 60.5 113 29.2
Lj1A585G40 Lonicera japonica HOM05D006642 ORTHO05D027104 8.6e-07 59.7 31 93.5
Lj3g0011615 Lotus japonicus HOM05D000001 ORTHO05D009335 1.5e-06 58.9 71 39.4
Phvul.009G215700 Phaseolus vulgaris HOM05D007173 ORTHO05D009151 1.5e-06 58.9 113 28.3
MBI02_g40094_MAGBIO Magnolia biondii HOM05D006642 ORTHO05D027104 5.6e-06 57.0 31 90.3
TPR.G37328 Trifolium pratense HOM05D000001 ORTHO05D009335 7.3e-06 56.6 71 39.4


User provided reference genes

Program Settings